Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887642
Identifier: 15887642
GI number: 15887642
Start: 287938
End: 288630
Strand: Reverse
Name: 15887642
Synonym: Atu0293
Alternate gene names: NA
Gene position: 288630-287938 (Counterclockwise)
Preceding gene: 159184245
Following gene: 15887641
Centisome position: 10.16
GC content: 60.17
Gene sequence:
>693_bases ATGCCAACTCTCTATCACTCCCCGATGTCGACCGCATCCCGGTTCGTTCGTCTGATCCTTGCGGAATACGGCTTCCAGAC CGATCTCGTGGAGGAGCAGCCGTGGGAAAGACGGCGGGAGTTTCTGGCGCTCAATCCTGCTGGCACCCTGCCGGTCTATC TCGATGACAATATGCGCTCCCTCAGCGGGCCTTATGTGCTGGCCGAATTTCTGGACGAAACCCATGGGGTTTTGAAGCGC GACCGGCGGCTTCTGGCGGAAGACCCGTTTCAGCGCGCGGAAATCCGTCGCCTGACGGAATGGTTTCTGCAGAAGATGGA AAATGACGTGACCCGGCCGCTGGTGCGCGAAAGGGTCTATAAATTGCAAATGACCGCGGCGCAGGGTGGCGGACCACCGG ATTCCAAGCTGCTGCGCACCGCGCGCAACAATATTCGCCAGCACATCAAATATCTGGAGTGGCTGGCCGGTTCGCGCACC TGGCTGGCCGGCGATCGGCTGAGCTACGCCGATCTTGCCGCAGCGGCCGGTGTTTCGGTGCTGGATTATCTCGGCGAGAT CAACTGGCTCGAAGCGCCGATTGCCAAGGAATGGTATCAGCGGGTGAAATCCCGCCCCTCCTTCCGGCCGTTTCTCAGCG AACGCATTCCGCGTCTTGCCCCCTCTTCCCACTACGCCGATCTGGATTTCTGA
Upstream 100 bases:
>100_bases TTAAAGTAGCCAAGCTCTTATAGCGTCTTGATGAAGCGAAACTGAAAAAGTTTTCCGGCAAATGCCGATCATGACAACCA ATCGTAAAAATTGAGTACCG
Downstream 100 bases:
>100_bases GGTCTGGCCTCCCAGGTTATTTGCTGCGGCGTGCGGCTATAATGAAAGCATGTCGTTTTCCCGAAACCGCTGCACACTTT CGGGTGACATGCACTATATA
Product: glutathione S-transferase
Products: HX; R-S-glutathione
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Protein; Unkown Function; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S- Transferase N-Terminal
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPTLYHSPMSTASRFVRLILAEYGFQTDLVEEQPWERRREFLALNPAGTLPVYLDDNMRSLSGPYVLAEFLDETHGVLKR DRRLLAEDPFQRAEIRRLTEWFLQKMENDVTRPLVRERVYKLQMTAAQGGGPPDSKLLRTARNNIRQHIKYLEWLAGSRT WLAGDRLSYADLAAAAGVSVLDYLGEINWLEAPIAKEWYQRVKSRPSFRPFLSERIPRLAPSSHYADLDF
Sequences:
>Translated_230_residues MPTLYHSPMSTASRFVRLILAEYGFQTDLVEEQPWERRREFLALNPAGTLPVYLDDNMRSLSGPYVLAEFLDETHGVLKR DRRLLAEDPFQRAEIRRLTEWFLQKMENDVTRPLVRERVYKLQMTAAQGGGPPDSKLLRTARNNIRQHIKYLEWLAGSRT WLAGDRLSYADLAAAAGVSVLDYLGEINWLEAPIAKEWYQRVKSRPSFRPFLSERIPRLAPSSHYADLDF >Mature_229_residues PTLYHSPMSTASRFVRLILAEYGFQTDLVEEQPWERRREFLALNPAGTLPVYLDDNMRSLSGPYVLAEFLDETHGVLKRD RRLLAEDPFQRAEIRRLTEWFLQKMENDVTRPLVRERVYKLQMTAAQGGGPPDSKLLRTARNNIRQHIKYLEWLAGSRTW LAGDRLSYADLAAAAGVSVLDYLGEINWLEAPIAKEWYQRVKSRPSFRPFLSERIPRLAPSSHYADLDF
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.18
Molecular weight: Translated: 26697; Mature: 26566
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLYHSPMSTASRFVRLILAEYGFQTDLVEEQPWERRREFLALNPAGTLPVYLDDNMRS CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEECCCCCCEEEECCCCHH LSGPYVLAEFLDETHGVLKRDRRLLAEDPFQRAEIRRLTEWFLQKMENDVTRPLVRERVY HCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLQMTAAQGGGPPDSKLLRTARNNIRQHIKYLEWLAGSRTWLAGDRLSYADLAAAAGVSV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH LDYLGEINWLEAPIAKEWYQRVKSRPSFRPFLSERIPRLAPSSHYADLDF HHHHCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PTLYHSPMSTASRFVRLILAEYGFQTDLVEEQPWERRREFLALNPAGTLPVYLDDNMRS CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEECCCCCCEEEECCCCHH LSGPYVLAEFLDETHGVLKRDRRLLAEDPFQRAEIRRLTEWFLQKMENDVTRPLVRERVY HCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLQMTAAQGGGPPDSKLLRTARNNIRQHIKYLEWLAGSRTWLAGDRLSYADLAAAAGVSV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHH LDYLGEINWLEAPIAKEWYQRVKSRPSFRPFLSERIPRLAPSSHYADLDF HHHHCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA