Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is yjeS [H]

Identifier: 15887641

GI number: 15887641

Start: 286657

End: 287637

Strand: Reverse

Name: yjeS [H]

Synonym: Atu0292

Alternate gene names: 15887641

Gene position: 287637-286657 (Counterclockwise)

Preceding gene: 15887642

Following gene: 15887640

Centisome position: 10.12

GC content: 61.98

Gene sequence:

>981_bases
ATGGCGTGGATGGAGGAAACCGAGGCGCGTCGGGCGGAGCCAAAAACGCTCTGGGGCGATGTGCGCTCCATCGTCATGTT
CGGCCTCAATTACGGGCCGGACGAAGATCCGCGTGGCCTGCTTTCGAAACCAGACAAGGCAGCCATTTCGGTCTATGCCC
GCAACCGCGATTACCATGACATCATCAAGGGGCGGCTGAAGGAGATCGCCACGCGCTTTGCTGCCCGCGCCGGTGAGGAT
GTGAAAGTCTTCGTCGATACCGCCCCGGTGATGGAAAAGCCGCTTGCCGCCGCCGCCGGTCTCGGCTGGCAGGGCAAGCA
CACCAATCTCGTCAGCCGCAGCCATGGCTCCTGGCTGTTTCTGGGCAGCATGTTCACCACCGCCGAGCTCTGTGTTGACG
AGGCCGAGAGGGATCATTGCGGTTCCTGCCGCGCCTGCCTCGACGCCTGTCCCACGGCGGCTTTTCCTGCCCCCTATCAG
CTGGACGCGCGCCGCTGCATCTCCTATCTCACCATTGAGCACAAGGGACCGATCCCGCACGAATTCCGGCCGATGATCGG
CAACCGCATCTATGGCTGTGATGATTGCCTTGCCGCCTGTCCGTGGAACAAGTTCGCGGCCAGCGCCTCCGAGATGAAGC
TGAAGGCGCGCGAAGATCTGAAGGAACCATCCATCGCCTTTCTGCTGACGCTTGACGATGCCGCCTTTCGCAGCTTTTTC
AGCGGCTCCCCCGTCAAGCGCATCGGCCGCAATCGCTTCATCCGCAATGTGCTGATTGCCGCGGGAAACTCTGCCGACCG
GCATTTCGTGGAACAATGCAAGGCACTTGCGGAGGCCGACCCTTCCGCGGAAGTGCGCGGCATGGCCGCATGGGCTTTGT
CGCGGCTTATGGACAGGGACGAATTCCGTACATACTCTGCCGGTCGCGCACCGGAGACTGATCCGGAGGCGGAAATGGAA
TGGCAACTGGCAGAGGCATGA

Upstream 100 bases:

>100_bases
TTTACTCGGCTTCGATCTGTGTCGCATCACGGCGCCCGACAGCATTCCGCTTGCACCGGAGCGGCTGCGGCAGTTTCTCG
AGAATGGCTACCACGGCACC

Downstream 100 bases:

>100_bases
AGCATGCATGTGATGATTTTCGGCGCGGGATATTCAGGGAAAGCCATTGCCAACGCGTTGAAAACCAAGGCTGCAAGTGT
CTGCGGCACCACACGCAGCG

Product: iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MAWMEETEARRAEPKTLWGDVRSIVMFGLNYGPDEDPRGLLSKPDKAAISVYARNRDYHDIIKGRLKEIATRFAARAGED
VKVFVDTAPVMEKPLAAAAGLGWQGKHTNLVSRSHGSWLFLGSMFTTAELCVDEAERDHCGSCRACLDACPTAAFPAPYQ
LDARRCISYLTIEHKGPIPHEFRPMIGNRIYGCDDCLAACPWNKFAASASEMKLKAREDLKEPSIAFLLTLDDAAFRSFF
SGSPVKRIGRNRFIRNVLIAAGNSADRHFVEQCKALAEADPSAEVRGMAAWALSRLMDRDEFRTYSAGRAPETDPEAEME
WQLAEA

Sequences:

>Translated_326_residues
MAWMEETEARRAEPKTLWGDVRSIVMFGLNYGPDEDPRGLLSKPDKAAISVYARNRDYHDIIKGRLKEIATRFAARAGED
VKVFVDTAPVMEKPLAAAAGLGWQGKHTNLVSRSHGSWLFLGSMFTTAELCVDEAERDHCGSCRACLDACPTAAFPAPYQ
LDARRCISYLTIEHKGPIPHEFRPMIGNRIYGCDDCLAACPWNKFAASASEMKLKAREDLKEPSIAFLLTLDDAAFRSFF
SGSPVKRIGRNRFIRNVLIAAGNSADRHFVEQCKALAEADPSAEVRGMAAWALSRLMDRDEFRTYSAGRAPETDPEAEME
WQLAEA
>Mature_325_residues
AWMEETEARRAEPKTLWGDVRSIVMFGLNYGPDEDPRGLLSKPDKAAISVYARNRDYHDIIKGRLKEIATRFAARAGEDV
KVFVDTAPVMEKPLAAAAGLGWQGKHTNLVSRSHGSWLFLGSMFTTAELCVDEAERDHCGSCRACLDACPTAAFPAPYQL
DARRCISYLTIEHKGPIPHEFRPMIGNRIYGCDDCLAACPWNKFAASASEMKLKAREDLKEPSIAFLLTLDDAAFRSFFS
GSPVKRIGRNRFIRNVLIAAGNSADRHFVEQCKALAEADPSAEVRGMAAWALSRLMDRDEFRTYSAGRAPETDPEAEMEW
QLAEA

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=302, Percent_Identity=37.7483443708609, Blast_Score=226, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 36255; Mature: 36124

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWMEETEARRAEPKTLWGDVRSIVMFGLNYGPDEDPRGLLSKPDKAAISVYARNRDYHD
CCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEEECCCCHHH
IIKGRLKEIATRFAARAGEDVKVFVDTAPVMEKPLAAAAGLGWQGKHTNLVSRSHGSWLF
HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEE
LGSMFTTAELCVDEAERDHCGSCRACLDACPTAAFPAPYQLDARRCISYLTIEHKGPIPH
ECHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEECCCCCCH
EFRPMIGNRIYGCDDCLAACPWNKFAASASEMKLKAREDLKEPSIAFLLTLDDAAFRSFF
HHHHHHCCCCCCCHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHH
SGSPVKRIGRNRFIRNVLIAAGNSADRHFVEQCKALAEADPSAEVRGMAAWALSRLMDRD
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EFRTYSAGRAPETDPEAEMEWQLAEA
HHHHCCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure 
AWMEETEARRAEPKTLWGDVRSIVMFGLNYGPDEDPRGLLSKPDKAAISVYARNRDYHD
CCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEEECCCCHHH
IIKGRLKEIATRFAARAGEDVKVFVDTAPVMEKPLAAAAGLGWQGKHTNLVSRSHGSWLF
HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEE
LGSMFTTAELCVDEAERDHCGSCRACLDACPTAAFPAPYQLDARRCISYLTIEHKGPIPH
ECHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEECCCCCCH
EFRPMIGNRIYGCDDCLAACPWNKFAASASEMKLKAREDLKEPSIAFLLTLDDAAFRSFF
HHHHHHCCCCCCCHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHH
SGSPVKRIGRNRFIRNVLIAAGNSADRHFVEQCKALAEADPSAEVRGMAAWALSRLMDRD
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EFRTYSAGRAPETDPEAEMEWQLAEA
HHHHCCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]