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The map label for this gene is ybjT [H]

Identifier: 159184245

GI number: 159184245

Start: 290155

End: 291135

Strand: Reverse

Name: ybjT [H]

Synonym: Atu0296

Alternate gene names: 159184245

Gene position: 291135-290155 (Counterclockwise)

Preceding gene: 15887646

Following gene: 15887642

Centisome position: 10.25

GC content: 60.35

Gene sequence:

>981_bases
ATGACCTTGGCCAACCTTCCACCCCTCGTCACCGTCTTCGGCGGTTCGGGTTTTGTCGGGCGGCATGTCGTGAGAATGCT
CGCCAAGCGCGGTTATCGTATCCGCGTCGCCGTGCGCCGCCCCGATCTTGCCGGTTTTCTGCAACCGCTCGGCAATGTCG
GCCAGATTTCCTTCGCGCAGGCTAACCTCCGTTATCGCGACTCCATCATCAAAGCCGTCGAAGACGCGGATCATGTCGTC
AATTGCGTCGGCATCCTGGCGGAAAGCGGCCGCAACACTTTTGACGCCGTGCAGGAATTCGGCGCGAAAGCCATTGCCGA
AGCGGCCCGCGACACTGGCGCCACGCTGACGCATATTTCCGCCATCGGTGCTGACGCCAATTCGCAGACCGGTTATGGCC
GCACCAAGGGCCGTGCCGAAGCCGCCATCCATTCCGTGCTACCCGGTGCCGTGATCCTGCGTCCGTCGATCATTTTCGGA
CCGGAAGACGATTTCTTCAACAAATTTGCCAAAATGGCCCGCAACCTGCCGTTCCTGCCGTTGATCGGCGGCGGAAAAAC
CAAATTCCAGCCTGTGTATGTCGAGGATGTTGCGGAGGCCGTCGCGCGCAGCGTCGATGGCAAGCTGAAACCCGGCGCAA
TTTATGAACTCGGTGGCCCTGACGTCATGACCTTCCGTGACTGTCTCGAGGCTGTTCTTGCCGCGACCTATCGCGAGCGC
TCCTTCGTCAACCTGCCCTTCGGCGTGGCCTCGATGATCGGCAAGCTCGCATCGTTGGTGCCGCTGATTACGCCGCCGTT
GACACCGGACCAGGTGACCATGCTGAAAAAGGACAATGTCGTTTCCGCTGAGGCAGAAAAGAAGGGCCTGACGCTGGAAG
GTATCGGCATCACCCCCGTTCGCGTCGCTTCGGTTCTGCCGTCCTACATGGTGCAGTATCGCCAGCATGGACAATTCTCG
AACGCCGGCAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
AAACTAGCCTCAAGCCTTGCGACAACCGCTCTTCACGCGCGCGTGGCTTTGGGCTAAGAGACTGAAAAACGCTTTATCGA
CAGCTTCTGAGGAGCCTCCC

Downstream 100 bases:

>100_bases
GGTCAGGCACGTCATGGAAATCAAAAGCGGGGCCACATCCCGCTTTTTTTATGCTGTCTACCGCAACCAAACCGCTTTCA
GTGCATTTTCACTGCCAGAT

Product: NADH-ubiquinone oxidoreductase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTLANLPPLVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFAQANLRYRDSIIKAVEDADHVV
NCVGILAESGRNTFDAVQEFGAKAIAEAARDTGATLTHISAIGADANSQTGYGRTKGRAEAAIHSVLPGAVILRPSIIFG
PEDDFFNKFAKMARNLPFLPLIGGGKTKFQPVYVEDVAEAVARSVDGKLKPGAIYELGGPDVMTFRDCLEAVLAATYRER
SFVNLPFGVASMIGKLASLVPLITPPLTPDQVTMLKKDNVVSAEAEKKGLTLEGIGITPVRVASVLPSYMVQYRQHGQFS
NAGKAA

Sequences:

>Translated_326_residues
MTLANLPPLVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFAQANLRYRDSIIKAVEDADHVV
NCVGILAESGRNTFDAVQEFGAKAIAEAARDTGATLTHISAIGADANSQTGYGRTKGRAEAAIHSVLPGAVILRPSIIFG
PEDDFFNKFAKMARNLPFLPLIGGGKTKFQPVYVEDVAEAVARSVDGKLKPGAIYELGGPDVMTFRDCLEAVLAATYRER
SFVNLPFGVASMIGKLASLVPLITPPLTPDQVTMLKKDNVVSAEAEKKGLTLEGIGITPVRVASVLPSYMVQYRQHGQFS
NAGKAA
>Mature_325_residues
TLANLPPLVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFAQANLRYRDSIIKAVEDADHVVN
CVGILAESGRNTFDAVQEFGAKAIAEAARDTGATLTHISAIGADANSQTGYGRTKGRAEAAIHSVLPGAVILRPSIIFGP
EDDFFNKFAKMARNLPFLPLIGGGKTKFQPVYVEDVAEAVARSVDGKLKPGAIYELGGPDVMTFRDCLEAVLAATYRERS
FVNLPFGVASMIGKLASLVPLITPPLTPDQVTMLKKDNVVSAEAEKKGLTLEGIGITPVRVASVLPSYMVQYRQHGQFSN
AGKAA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=299, Percent_Identity=30.4347826086957, Blast_Score=127, Evalue=1e-29,
Organism=Escherichia coli, GI87081793, Length=274, Percent_Identity=24.0875912408759, Blast_Score=82, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17556106, Length=234, Percent_Identity=30.7692307692308, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24667554, Length=223, Percent_Identity=34.9775784753363, Blast_Score=110, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 34793; Mature: 34661

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLANLPPLVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFAQ
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCCEEEHH
ANLRYRDSIIKAVEDADHVVNCVGILAESGRNTFDAVQEFGAKAIAEAARDTGATLTHIS
HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AIGADANSQTGYGRTKGRAEAAIHSVLPGAVILRPSIIFGPEDDFFNKFAKMARNLPFLP
HHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHHHCCCCEE
LIGGGKTKFQPVYVEDVAEAVARSVDGKLKPGAIYELGGPDVMTFRDCLEAVLAATYRER
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC
SFVNLPFGVASMIGKLASLVPLITPPLTPDQVTMLKKDNVVSAEAEKKGLTLEGIGITPV
CEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECHHHHCCCEEECCCCCHH
RVASVLPSYMVQYRQHGQFSNAGKAA
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TLANLPPLVTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFAQ
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCCEEEHH
ANLRYRDSIIKAVEDADHVVNCVGILAESGRNTFDAVQEFGAKAIAEAARDTGATLTHIS
HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AIGADANSQTGYGRTKGRAEAAIHSVLPGAVILRPSIIFGPEDDFFNKFAKMARNLPFLP
HHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHHHCCCCEE
LIGGGKTKFQPVYVEDVAEAVARSVDGKLKPGAIYELGGPDVMTFRDCLEAVLAATYRER
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC
SFVNLPFGVASMIGKLASLVPLITPPLTPDQVTMLKKDNVVSAEAEKKGLTLEGIGITPV
CEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECHHHHCCCEEECCCCCHH
RVASVLPSYMVQYRQHGQFSNAGKAA
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]