Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yeeZ [C]
Identifier: 15887640
GI number: 15887640
Start: 285781
End: 286653
Strand: Reverse
Name: yeeZ [C]
Synonym: Atu0291
Alternate gene names: 15887640
Gene position: 286653-285781 (Counterclockwise)
Preceding gene: 15887641
Following gene: 15887639
Centisome position: 10.09
GC content: 58.53
Gene sequence:
>873_bases ATGCATGTGATGATTTTCGGCGCGGGATATTCAGGGAAAGCCATTGCCAACGCGTTGAAAACCAAGGCTGCAAGTGTCTG CGGCACCACACGCAGCGCGGATAAGTTCGCAAACCTCGCCGCCGCCGGCATGACGCCGCTGCTCTTCGACGGCGTCCATC TCGATGACGATCTCATCGCTGCGATGCGCAATGTTACCCATCTCGTGCAATCCATCGCTCCAGGCAAGGACGGCGACCCT CTGTTTGCGCTTCTGGGCGGCGATCTGAAAAAGCTCCTGCCCAATCTGAAATGGTTAGCCTATCTTTCCACCGTCGGCGT CTATGGCGACCATCACGGCGCCTGGGTGAACGAGACGACACCCTGTCGCCCGGTCTCCGCACGCTCCGTGGAGCGGGTAG CCGCCGAGGCCGCGTGGACTGAGGCAGCCCAAAGCGCAGATGTGCCGCTTTCCATCCTGCGCCTGTCCGGAATTTATGGC CCGGGACGCAATACCTTCATGAATTTCGAGAAGGGAACGGCGCGACGGCTGGTGAAGAAGGATCAGGTATTCAATCGCAT CCGTGTCGAGGATATCGGCGCGGCAATCGCCTTTCTGGCACTGAAGAACGAACGCGGCATCTTCAACGTGACCGACGACG AACCCTGCCCACCGCAGGATGTGGTGAGCTTCGCGGCCGACCTAATGGGTGTTGTCCCCCCTGCTGAACAGGATTTCGGA ACCGCCGATCTGACGCCGATGGCGCGCTCTTTTTATGGCGAAAACAAGCGCGTTTCCAATGCTAAAATAAGGGAACTCGG CTTTGATTTCCGCTTTCCGGAGTATCGGCAGTCGCTGAAGCAATTATGGGAAAGCAGCCTCTGGCGTGGCTGA
Upstream 100 bases:
>100_bases GCTTATGGACAGGGACGAATTCCGTACATACTCTGCCGGTCGCGCACCGGAGACTGATCCGGAGGCGGAAATGGAATGGC AACTGGCAGAGGCATGAAGC
Downstream 100 bases:
>100_bases AAACAACCCCGTCAAAAACGACGAAAAATCCATCCAACGCCGTTTTGGCGGATAGTTTTCGTTGTATTTAAGCGAATTAA GACTTAATTAACTACGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; Oxidoreductase Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Epimerase/Dehydratase-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Epimerase/Dehydratase-Related Protein; ActC Family Protein; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase; NAD Dependent Epimerase/Dehydratase-Related Protein; NADP Oxidoreductase Co
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MHVMIFGAGYSGKAIANALKTKAASVCGTTRSADKFANLAAAGMTPLLFDGVHLDDDLIAAMRNVTHLVQSIAPGKDGDP LFALLGGDLKKLLPNLKWLAYLSTVGVYGDHHGAWVNETTPCRPVSARSVERVAAEAAWTEAAQSADVPLSILRLSGIYG PGRNTFMNFEKGTARRLVKKDQVFNRIRVEDIGAAIAFLALKNERGIFNVTDDEPCPPQDVVSFAADLMGVVPPAEQDFG TADLTPMARSFYGENKRVSNAKIRELGFDFRFPEYRQSLKQLWESSLWRG
Sequences:
>Translated_290_residues MHVMIFGAGYSGKAIANALKTKAASVCGTTRSADKFANLAAAGMTPLLFDGVHLDDDLIAAMRNVTHLVQSIAPGKDGDP LFALLGGDLKKLLPNLKWLAYLSTVGVYGDHHGAWVNETTPCRPVSARSVERVAAEAAWTEAAQSADVPLSILRLSGIYG PGRNTFMNFEKGTARRLVKKDQVFNRIRVEDIGAAIAFLALKNERGIFNVTDDEPCPPQDVVSFAADLMGVVPPAEQDFG TADLTPMARSFYGENKRVSNAKIRELGFDFRFPEYRQSLKQLWESSLWRG >Mature_290_residues MHVMIFGAGYSGKAIANALKTKAASVCGTTRSADKFANLAAAGMTPLLFDGVHLDDDLIAAMRNVTHLVQSIAPGKDGDP LFALLGGDLKKLLPNLKWLAYLSTVGVYGDHHGAWVNETTPCRPVSARSVERVAAEAAWTEAAQSADVPLSILRLSGIYG PGRNTFMNFEKGTARRLVKKDQVFNRIRVEDIGAAIAFLALKNERGIFNVTDDEPCPPQDVVSFAADLMGVVPPAEQDFG TADLTPMARSFYGENKRVSNAKIRELGFDFRFPEYRQSLKQLWESSLWRG
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31603; Mature: 31603
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVMIFGAGYSGKAIANALKTKAASVCGTTRSADKFANLAAAGMTPLLFDGVHLDDDLIA CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCCCHHHHH AMRNVTHLVQSIAPGKDGDPLFALLGGDLKKLLPNLKWLAYLSTVGVYGDHHGAWVNETT HHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC PCRPVSARSVERVAAEAAWTEAAQSADVPLSILRLSGIYGPGRNTFMNFEKGTARRLVKK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCCHHHHHHHHH DQVFNRIRVEDIGAAIAFLALKNERGIFNVTDDEPCPPQDVVSFAADLMGVVPPAEQDFG HHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TADLTPMARSFYGENKRVSNAKIRELGFDFRFPEYRQSLKQLWESSLWRG CCCCCHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHVMIFGAGYSGKAIANALKTKAASVCGTTRSADKFANLAAAGMTPLLFDGVHLDDDLIA CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCCCHHHHH AMRNVTHLVQSIAPGKDGDPLFALLGGDLKKLLPNLKWLAYLSTVGVYGDHHGAWVNETT HHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC PCRPVSARSVERVAAEAAWTEAAQSADVPLSILRLSGIYGPGRNTFMNFEKGTARRLVKK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCCHHHHHHHHH DQVFNRIRVEDIGAAIAFLALKNERGIFNVTDDEPCPPQDVVSFAADLMGVVPPAEQDFG HHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TADLTPMARSFYGENKRVSNAKIRELGFDFRFPEYRQSLKQLWESSLWRG CCCCCHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA