Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887561
Identifier: 15887561
GI number: 15887561
Start: 213782
End: 214888
Strand: Direct
Name: 15887561
Synonym: Atu0209
Alternate gene names: NA
Gene position: 213782-214888 (Clockwise)
Preceding gene: 159184210
Following gene: 159184211
Centisome position: 7.52
GC content: 56.46
Gene sequence:
>1107_bases ATGAGCGCCGCCCAGAAAACCACGCTTTCTTACTTCAAATGGGCATTTATCGTCACCGTCGTTGGTCTGATCCTCGGCGG TTACCTCGGCTGGGAAATGACCGGCACGATCGGCGGCACAGCGACGATTTTCTTCATCTGCGCGGTGCTTGCCGTGCTGG AAATCTCGCTGTCCTTCGACAATGCCATCGTCAACGCCAACAAGCTCAAGGACATGACACCGGTCTGGCAACATCGCTTC CTGACCTGGGGTATTCTCATTGCCGTTTTCGGCATGCGAATTGTCTTCCCGTTGCTCATCGTCGTCGTTGCCGCCAATGT CGGCCCCTGGACGGCGCTTGTGATGGCGGCCACGCAGCCGGAGCGTTATGCGGAAATCATGCGTGACGCCCATCTGCCGA TTGCGGCTTTCGGCGGCACCTTCCTGATGATGGTTGGTCTCAACTTCTTCTTCGACCATGAAAAGGATGTCCATTGGGTG CGCTGGATCGAGGAAAAGGCTGCGACCTATTCTTCCGTCAAGGGCATCGAGATTGCCTTCGTTCTTATCGTCATGCTGGT GTTTTCTCGTATCATCGGTGCCAGTGACAACCCGGAACTCGGTCCGGTCGCTGCCAACACCTTCTTCCATTCGGCGATCT GGGGTCTTTTGACCTTCCTGCTGGTGGAAGTTGTCGGTGGTATTCTCGATCGCAGCCAGGAAATGCTGGAAGGCGCGGCC AAAGGCGGTTTCGGTGCGTTTCTTTATCTCGAAGTGCTGGATGCCAGCTTCTCCTTTGATGGCGTGATCGGTGCTTTCGC ACTGACGCAGAACCTCTTCATCATCGCCATCGGCCTCGGCATCGGCGCCATGTATGTGCGCTCGATGACGATCATGCTGG TGGAGAAGGGAACGCTGGCCGAATACCGCTATCTGGAACACGGCGCTTTTTACGCGATCCTGATCCTGTCGGTCATCATG TATGTGCAGACCATGTTCCATATACCGGAGGTCATCACCGGTCTTGGTGGCGCGACCCTGATCGGCATTTCGCTCTGGTC ATCGATCCGGCATAACCGGCAACAAAGTGCCGGTACCGCAGATGCGGCGCGCGGTGCGGAAATCTGA
Upstream 100 bases:
>100_bases CTATGAAAAACCTGAATGTGCTTCGCGCGCGTGCTTTTTGCGTGCGGCCTGACGCTCTACGTCGGTCCGCGAACCTGCTC GTCATCGCAGGAGACCGGAC
Downstream 100 bases:
>100_bases TCCACAACGATCCTCGCCTTCCGCCGTGGTGGCGGAAGGCAGTTTTTAAGCATCATATCTCCTGTTGCCTGTTTTTGTCG CTATTTTCTCCTTGAGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSAAQKTTLSYFKWAFIVTVVGLILGGYLGWEMTGTIGGTATIFFICAVLAVLEISLSFDNAIVNANKLKDMTPVWQHRF LTWGILIAVFGMRIVFPLLIVVVAANVGPWTALVMAATQPERYAEIMRDAHLPIAAFGGTFLMMVGLNFFFDHEKDVHWV RWIEEKAATYSSVKGIEIAFVLIVMLVFSRIIGASDNPELGPVAANTFFHSAIWGLLTFLLVEVVGGILDRSQEMLEGAA KGGFGAFLYLEVLDASFSFDGVIGAFALTQNLFIIAIGLGIGAMYVRSMTIMLVEKGTLAEYRYLEHGAFYAILILSVIM YVQTMFHIPEVITGLGGATLIGISLWSSIRHNRQQSAGTADAARGAEI
Sequences:
>Translated_368_residues MSAAQKTTLSYFKWAFIVTVVGLILGGYLGWEMTGTIGGTATIFFICAVLAVLEISLSFDNAIVNANKLKDMTPVWQHRF LTWGILIAVFGMRIVFPLLIVVVAANVGPWTALVMAATQPERYAEIMRDAHLPIAAFGGTFLMMVGLNFFFDHEKDVHWV RWIEEKAATYSSVKGIEIAFVLIVMLVFSRIIGASDNPELGPVAANTFFHSAIWGLLTFLLVEVVGGILDRSQEMLEGAA KGGFGAFLYLEVLDASFSFDGVIGAFALTQNLFIIAIGLGIGAMYVRSMTIMLVEKGTLAEYRYLEHGAFYAILILSVIM YVQTMFHIPEVITGLGGATLIGISLWSSIRHNRQQSAGTADAARGAEI >Mature_367_residues SAAQKTTLSYFKWAFIVTVVGLILGGYLGWEMTGTIGGTATIFFICAVLAVLEISLSFDNAIVNANKLKDMTPVWQHRFL TWGILIAVFGMRIVFPLLIVVVAANVGPWTALVMAATQPERYAEIMRDAHLPIAAFGGTFLMMVGLNFFFDHEKDVHWVR WIEEKAATYSSVKGIEIAFVLIVMLVFSRIIGASDNPELGPVAANTFFHSAIWGLLTFLLVEVVGGILDRSQEMLEGAAK GGFGAFLYLEVLDASFSFDGVIGAFALTQNLFIIAIGLGIGAMYVRSMTIMLVEKGTLAEYRYLEHGAFYAILILSVIMY VQTMFHIPEVITGLGGATLIGISLWSSIRHNRQQSAGTADAARGAEI
Specific function: Unknown
COG id: COG2899
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40143; Mature: 40012
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAQKTTLSYFKWAFIVTVVGLILGGYLGWEMTGTIGGTATIFFICAVLAVLEISLSFD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCC NAIVNANKLKDMTPVWQHRFLTWGILIAVFGMRIVFPLLIVVVAANVGPWTALVMAATQP HHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC ERYAEIMRDAHLPIAAFGGTFLMMVGLNFFFDHEKDVHWVRWIEEKAATYSSVKGIEIAF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH VLIVMLVFSRIIGASDNPELGPVAANTFFHSAIWGLLTFLLVEVVGGILDRSQEMLEGAA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGGFGAFLYLEVLDASFSFDGVIGAFALTQNLFIIAIGLGIGAMYVRSMTIMLVEKGTLA CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHEEEEHHHHHHHHHHHHHHEEEECCCHH EYRYLEHGAFYAILILSVIMYVQTMFHIPEVITGLGGATLIGISLWSSIRHNRQQSAGTA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC DAARGAEI CCCCCCCC >Mature Secondary Structure SAAQKTTLSYFKWAFIVTVVGLILGGYLGWEMTGTIGGTATIFFICAVLAVLEISLSFD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCC NAIVNANKLKDMTPVWQHRFLTWGILIAVFGMRIVFPLLIVVVAANVGPWTALVMAATQP HHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC ERYAEIMRDAHLPIAAFGGTFLMMVGLNFFFDHEKDVHWVRWIEEKAATYSSVKGIEIAF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH VLIVMLVFSRIIGASDNPELGPVAANTFFHSAIWGLLTFLLVEVVGGILDRSQEMLEGAA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGGFGAFLYLEVLDASFSFDGVIGAFALTQNLFIIAIGLGIGAMYVRSMTIMLVEKGTLA CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCHHEEEEHHHHHHHHHHHHHHEEEECCCHH EYRYLEHGAFYAILILSVIMYVQTMFHIPEVITGLGGATLIGISLWSSIRHNRQQSAGTA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC DAARGAEI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA