Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184211
Identifier: 159184211
GI number: 159184211
Start: 215253
End: 215597
Strand: Direct
Name: 159184211
Synonym: Atu0210
Alternate gene names: NA
Gene position: 215253-215597 (Clockwise)
Preceding gene: 15887561
Following gene: 15887563
Centisome position: 7.58
GC content: 59.42
Gene sequence:
>345_bases TTGCCTGCACAATTGTCACCCACGGAGGCCTTGGGCCTCTGGCACCGTGTATCCACGGCGCAGGTCATTGACGATCAGCC GGATTTGACCTTGCGTCAGACGGCCATTCTGCTGCAGATTTATCTCGTGCCGCCGCCGCATACCGTTCGGGGTCTCGCCG CCATGCTGGGGGTCACCAAACCGGTCATCACCCGCGCACTCGACAGTCTAGGCGCGCTGGGATTGGTCGACCGGGTTCGG GATGAGCGGGACAGGCGCAATGTCGTGATAAAACGCACCGTGGCCGGTGCGCTTTATCTGGAAAAATTCGGCGATCTGAT TATTGATCAGGCGCGCAAGATCTAA
Upstream 100 bases:
>100_bases AGGTCTGCGCCGCGCGGCGGTTTTGTTTGTGCGGTTGGTTCTTGAGTTTTCCATTGCGTTGGATGAAAACAGTGGAACAA CGACGGGAAGGGTCACCTGC
Downstream 100 bases:
>100_bases CCCCTGGATGCGAAACCCATGATGCTCGACCGCCGCCTGAATGTCTTCCGCCCCGATCTCGCCGATGCGAAACTGCAGGG TGTGGTAGAGGCCGAACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Transcriptional Regulator MarR; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family Protein
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MPAQLSPTEALGLWHRVSTAQVIDDQPDLTLRQTAILLQIYLVPPPHTVRGLAAMLGVTKPVITRALDSLGALGLVDRVR DERDRRNVVIKRTVAGALYLEKFGDLIIDQARKI
Sequences:
>Translated_114_residues MPAQLSPTEALGLWHRVSTAQVIDDQPDLTLRQTAILLQIYLVPPPHTVRGLAAMLGVTKPVITRALDSLGALGLVDRVR DERDRRNVVIKRTVAGALYLEKFGDLIIDQARKI >Mature_113_residues PAQLSPTEALGLWHRVSTAQVIDDQPDLTLRQTAILLQIYLVPPPHTVRGLAAMLGVTKPVITRALDSLGALGLVDRVRD ERDRRNVVIKRTVAGALYLEKFGDLIIDQARKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12602; Mature: 12471
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQLSPTEALGLWHRVSTAQVIDDQPDLTLRQTAILLQIYLVPPPHTVRGLAAMLGVTK CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHCHH PVITRALDSLGALGLVDRVRDERDRRNVVIKRTVAGALYLEKFGDLIIDQARKI HHHHHHHHHHCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PAQLSPTEALGLWHRVSTAQVIDDQPDLTLRQTAILLQIYLVPPPHTVRGLAAMLGVTK CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHCHH PVITRALDSLGALGLVDRVRDERDRRNVVIKRTVAGALYLEKFGDLIIDQARKI HHHHHHHHHHCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA