Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is sam [H]
Identifier: 159184210
GI number: 159184210
Start: 212655
End: 213491
Strand: Direct
Name: sam [H]
Synonym: Atu0208
Alternate gene names: 159184210
Gene position: 212655-213491 (Clockwise)
Preceding gene: 15887559
Following gene: 15887561
Centisome position: 7.48
GC content: 60.81
Gene sequence:
>837_bases ATGGGCAAATGGCTGGTATCAACCTATAGCCAGGGTCAGGTCATCCTGATCAGAAGTGCGGCAGCACTTGTCATTCTCGT TCCGATCGTCTGGAGAGCCGGCCTTTCCGGCCTCGTGAATGTCGAGCGGCCCGGCCTGCAGGTCGCGCGTGTGTTCTTCT CGACGGCCGAACTTTTCTGTTTCTATTTCGCAGTGGCGAGCCTGCCGCTGGCGGATGTCATGACCTACTGGCTGGCGGCT CCCATTTATGTGGCCGCTCTGGCGCCGTTTCTGCTCGGAGAAAAGGTCGGTTGGCGCCGCTGGACGGCCATCGCCATCGG TTTTGTCGGCGTTCTCATCGCGCTCAAACCCAGCTCGGCAAGCCTCACCTCCGCAGCACTCTTTTCCATTCTCGGCAGCG CGGCCTTCGCCTTTATGATGTTGTCAGGCCGCCAGCTGCGCAACACGCCGGATACGGTGCTTGCCTTCTGGCAGATCATC GGCGCAGGGCTTGCGGGCATCGTTGCGGTATTCATGACCCCATCCGGCTGGCTGCCGGTCCAGTCCAGCTTCGACCTGGC GTTTCTGAGCCTGCTCGGCGTGGTCGCCATGGCGGCGCATGTGCTGGTCAACCGGGCCTTGAAGCTTGCCGACGCCGCCA CCGTCGCGCCGCTGCAATATACCCTGCTGCTCTGGGCGGTCATCTTCGGCTGGCTGTTCTTCAACGATGTGCCGCAGACC AGTATCGTTGTCGGTGCAGGCCTAATTGTTTTTTCCGGCCTTTATATTTTCTTCCGCGAAAATACACTCAAGCGACGCCG CGACGCGGCCGACAGACTGGCTGCGGAGCAGGTTTGA
Upstream 100 bases:
>100_bases GGAATCTAACATGTCGACTATGATAAGAAAGCTTTCGCCGACTGGCCTCGGCGTGGCCGTCATGCTGCTTGGAATGCTGC TTTTTGCATTGAACGACGCC
Downstream 100 bases:
>100_bases TCTTTCTAGTTAGTCTTGGTCACAATCACGGGACTTGACGAAGGCGTGATCTTCAGGAAGTAAGAGAGGGCCCTGCGATA ATTTGTCTCGTATGGGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MGKWLVSTYSQGQVILIRSAAALVILVPIVWRAGLSGLVNVERPGLQVARVFFSTAELFCFYFAVASLPLADVMTYWLAA PIYVAALAPFLLGEKVGWRRWTAIAIGFVGVLIALKPSSASLTSAALFSILGSAAFAFMMLSGRQLRNTPDTVLAFWQII GAGLAGIVAVFMTPSGWLPVQSSFDLAFLSLLGVVAMAAHVLVNRALKLADAATVAPLQYTLLLWAVIFGWLFFNDVPQT SIVVGAGLIVFSGLYIFFRENTLKRRRDAADRLAAEQV
Sequences:
>Translated_278_residues MGKWLVSTYSQGQVILIRSAAALVILVPIVWRAGLSGLVNVERPGLQVARVFFSTAELFCFYFAVASLPLADVMTYWLAA PIYVAALAPFLLGEKVGWRRWTAIAIGFVGVLIALKPSSASLTSAALFSILGSAAFAFMMLSGRQLRNTPDTVLAFWQII GAGLAGIVAVFMTPSGWLPVQSSFDLAFLSLLGVVAMAAHVLVNRALKLADAATVAPLQYTLLLWAVIFGWLFFNDVPQT SIVVGAGLIVFSGLYIFFRENTLKRRRDAADRLAAEQV >Mature_277_residues GKWLVSTYSQGQVILIRSAAALVILVPIVWRAGLSGLVNVERPGLQVARVFFSTAELFCFYFAVASLPLADVMTYWLAAP IYVAALAPFLLGEKVGWRRWTAIAIGFVGVLIALKPSSASLTSAALFSILGSAAFAFMMLSGRQLRNTPDTVLAFWQIIG AGLAGIVAVFMTPSGWLPVQSSFDLAFLSLLGVVAMAAHVLVNRALKLADAATVAPLQYTLLLWAVIFGWLFFNDVPQTS IVVGAGLIVFSGLYIFFRENTLKRRRDAADRLAAEQV
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30020; Mature: 29889
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKWLVSTYSQGQVILIRSAAALVILVPIVWRAGLSGLVNVERPGLQVARVFFSTAELFC CCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHH FYFAVASLPLADVMTYWLAAPIYVAALAPFLLGEKVGWRRWTAIAIGFVGVLIALKPSSA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC SLTSAALFSILGSAAFAFMMLSGRQLRNTPDTVLAFWQIIGAGLAGIVAVFMTPSGWLPV HHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QSSFDLAFLSLLGVVAMAAHVLVNRALKLADAATVAPLQYTLLLWAVIFGWLFFNDVPQT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SIVVGAGLIVFSGLYIFFRENTLKRRRDAADRLAAEQV HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GKWLVSTYSQGQVILIRSAAALVILVPIVWRAGLSGLVNVERPGLQVARVFFSTAELFC CCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHH FYFAVASLPLADVMTYWLAAPIYVAALAPFLLGEKVGWRRWTAIAIGFVGVLIALKPSSA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC SLTSAALFSILGSAAFAFMMLSGRQLRNTPDTVLAFWQIIGAGLAGIVAVFMTPSGWLPV HHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QSSFDLAFLSLLGVVAMAAHVLVNRALKLADAATVAPLQYTLLLWAVIFGWLFFNDVPQT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SIVVGAGLIVFSGLYIFFRENTLKRRRDAADRLAAEQV HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]