Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423978
Identifier: 158423978
GI number: 158423978
Start: 2680293
End: 2681912
Strand: Reverse
Name: 158423978
Synonym: AZC_2354
Alternate gene names: NA
Gene position: 2681912-2680293 (Counterclockwise)
Preceding gene: 158423979
Following gene: 158423977
Centisome position: 49.94
GC content: 67.22
Gene sequence:
>1620_bases ATGAGCGAAATCGACGACATCCGTATGCAGGTGATGTGGAATCGCCTGATCTCGGTGGTGGAAGAGCAGGCGATGACCCT GCTGCGCACGGCCTTCTCGACCTCGGTGCGCGAGGCGGGCGACCTGTCCGCCGGAGTGTTCGACCCGATGGGCCGCATGC TGGCGCAGGCGGTCACCGGAACACCGGGCCATGTGAACACCATGGCCGAGGCGGTGGGGAACTTCATGGCGGAGATCCCC CGCGCCGAGATGTACGAGGGCGACACCTATGTCACCAACGACCCGTGGAAGGGCACCGGGCATCTGCACGACATCACCAT GGTGTCCCCATCCTTCCTCGACGGGGAGCTGGTCGGCTTCTTCGCCTGCACCGCCCATGTGGTGGATGTTGGCGGGCGTG GTTTCGGGGCGGACGGCAAGTCCGTCTATGAGGAAGGCATCCAGATCCCGATCATGAAGTTCGCCGAGCGCGGCACGGTG AACCGGGACCTCGTCCGCATCCTGCGCCAGAATGTGCGTGAGCCCAATCAGGTGGTCGGCGATTTCTATTCGCTCGCAGC GTGTAACGACGTGGGCCATCGTCGCCTCGTGGAGATGATGCGCGAAGTGGGCCTCGCCAGCCTCGATCCGCTGGCGGATT TCATCTTCACGCGCACCAGCAGCGCCATGGCCGAACGCATCCGCGCCCTGCCCAAGGGCTCTTGGTCCAACACCATGGTC ACTGATGGCTATGATGAGGCGATCCCGCTTGCCGCTTGCGTCACCATTCGGGACGAGAGCGTGCATGTGGACTTCACCGG CAGCGCGCCGGTGAGCCGATGGGGCATCAACGTGCCCATCAGCTACACCAAGGCCTATGCCTCCTATGCGCTGAAGTGCG TGGTGGCCCCGGACATTCCGAACAACTGGGCCTCGCTCGGCTTCTTCACCGTGTCCTCGCCGGTGAACATCCTCAATGCG GAGCGTCCGGCGCCCGTGAGCTTGCGCCATGTGCTCGGCCACCTCGTGCCGGATCTGGTGCTCGGCGCCGTCGCGGATGC CCTGCCGGGGCAGGTGCTCGCGGAAGGCGCGGCCTCGCTGTGGAACATCCATCTCTCGCTGCGGCCGGTGGCGGGCGGGG CCGGCCGCCGCGCGGAAGTGCTGATGTTCAACTCGGGGGGCATGGGCGCGCGCCCCGGGCTCGACGGGCTCTCGGCCACG GCCTTCCCCTCGGGCGTCCACACCATGCCCATCGAGGCCACGGAACAGACCGGCCCGGTGGTGATCTGGCGCAAGGAACT GCGGCCCGATTCCGGCGGCGACGGCACCTATCGGGGCGGCCTTGGCCAGATCATCGAGATCGCCGCCGCCGAGGGGCATG AGTTCGATTTCTCGGCCATGTTCGATCGCATCACCTATCCCGCCCGAGGCCGCGCCGGGGGAGGGCAGGGCGCGCCTGGC GGCGTCCGCCTTGACGACGGCACGAAGATGCGCGGCAAGGGCTGGCAGCATGTGCCAGCGGGCCGCCGGCTCATTCTCAC CCTGCCGGGTGGCGGCGGCTACGGGCCGCCCGAGGGACGTTCGGATGCGGCGCGGCATGACGATGCCATCAAGGGGTATG TGACGGAAAGCGAGCACTGA
Upstream 100 bases:
>100_bases TGATCGTGGAGCGGGAGACCGCCACGGTCATCACCTCTCTCTTCGATGCCGTGCTGCAGAGCGACGGCTCCATCCTCCTC GTCCGCAAGGGCCGCCACTG
Downstream 100 bases:
>100_bases ACGGGAGCCCGCCCGGCTTAAGGCGTTCTGTCCGGTCGGCTCTCGCCTCACCGGGAGGCCTGAGACGCGCCCCTGCACGG AGGCGGGGGCACCTTCCCGT
Product: hydantoinase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MSEIDDIRMQVMWNRLISVVEEQAMTLLRTAFSTSVREAGDLSAGVFDPMGRMLAQAVTGTPGHVNTMAEAVGNFMAEIP RAEMYEGDTYVTNDPWKGTGHLHDITMVSPSFLDGELVGFFACTAHVVDVGGRGFGADGKSVYEEGIQIPIMKFAERGTV NRDLVRILRQNVREPNQVVGDFYSLAACNDVGHRRLVEMMREVGLASLDPLADFIFTRTSSAMAERIRALPKGSWSNTMV TDGYDEAIPLAACVTIRDESVHVDFTGSAPVSRWGINVPISYTKAYASYALKCVVAPDIPNNWASLGFFTVSSPVNILNA ERPAPVSLRHVLGHLVPDLVLGAVADALPGQVLAEGAASLWNIHLSLRPVAGGAGRRAEVLMFNSGGMGARPGLDGLSAT AFPSGVHTMPIEATEQTGPVVIWRKELRPDSGGDGTYRGGLGQIIEIAAAEGHEFDFSAMFDRITYPARGRAGGGQGAPG GVRLDDGTKMRGKGWQHVPAGRRLILTLPGGGGYGPPEGRSDAARHDDAIKGYVTESEH
Sequences:
>Translated_539_residues MSEIDDIRMQVMWNRLISVVEEQAMTLLRTAFSTSVREAGDLSAGVFDPMGRMLAQAVTGTPGHVNTMAEAVGNFMAEIP RAEMYEGDTYVTNDPWKGTGHLHDITMVSPSFLDGELVGFFACTAHVVDVGGRGFGADGKSVYEEGIQIPIMKFAERGTV NRDLVRILRQNVREPNQVVGDFYSLAACNDVGHRRLVEMMREVGLASLDPLADFIFTRTSSAMAERIRALPKGSWSNTMV TDGYDEAIPLAACVTIRDESVHVDFTGSAPVSRWGINVPISYTKAYASYALKCVVAPDIPNNWASLGFFTVSSPVNILNA ERPAPVSLRHVLGHLVPDLVLGAVADALPGQVLAEGAASLWNIHLSLRPVAGGAGRRAEVLMFNSGGMGARPGLDGLSAT AFPSGVHTMPIEATEQTGPVVIWRKELRPDSGGDGTYRGGLGQIIEIAAAEGHEFDFSAMFDRITYPARGRAGGGQGAPG GVRLDDGTKMRGKGWQHVPAGRRLILTLPGGGGYGPPEGRSDAARHDDAIKGYVTESEH >Mature_538_residues SEIDDIRMQVMWNRLISVVEEQAMTLLRTAFSTSVREAGDLSAGVFDPMGRMLAQAVTGTPGHVNTMAEAVGNFMAEIPR AEMYEGDTYVTNDPWKGTGHLHDITMVSPSFLDGELVGFFACTAHVVDVGGRGFGADGKSVYEEGIQIPIMKFAERGTVN RDLVRILRQNVREPNQVVGDFYSLAACNDVGHRRLVEMMREVGLASLDPLADFIFTRTSSAMAERIRALPKGSWSNTMVT DGYDEAIPLAACVTIRDESVHVDFTGSAPVSRWGINVPISYTKAYASYALKCVVAPDIPNNWASLGFFTVSSPVNILNAE RPAPVSLRHVLGHLVPDLVLGAVADALPGQVLAEGAASLWNIHLSLRPVAGGAGRRAEVLMFNSGGMGARPGLDGLSATA FPSGVHTMPIEATEQTGPVVIWRKELRPDSGGDGTYRGGLGQIIEIAAAEGHEFDFSAMFDRITYPARGRAGGGQGAPGG VRLDDGTKMRGKGWQHVPAGRRLILTLPGGGGYGPPEGRSDAARHDDAIKGYVTESEH
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=547, Percent_Identity=28.8848263254113, Blast_Score=124, Evalue=3e-28, Organism=Caenorhabditis elegans, GI133901900, Length=553, Percent_Identity=26.0397830018083, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI133901902, Length=542, Percent_Identity=25.4612546125461, Blast_Score=111, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6322634, Length=553, Percent_Identity=25.6781193490054, Blast_Score=136, Evalue=8e-33, Organism=Drosophila melanogaster, GI45550492, Length=566, Percent_Identity=27.3851590106007, Blast_Score=121, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: NA
Molecular weight: Translated: 57660; Mature: 57529
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIDDIRMQVMWNRLISVVEEQAMTLLRTAFSTSVREAGDLSAGVFDPMGRMLAQAVTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC TPGHVNTMAEAVGNFMAEIPRAEMYEGDTYVTNDPWKGTGHLHDITMVSPSFLDGELVGF CCCHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHH FACTAHVVDVGGRGFGADGKSVYEEGIQIPIMKFAERGTVNRDLVRILRQNVREPNQVVG HHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH DFYSLAACNDVGHRRLVEMMREVGLASLDPLADFIFTRTSSAMAERIRALPKGSWSNTMV HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEE TDGYDEAIPLAACVTIRDESVHVDFTGSAPVSRWGINVPISYTKAYASYALKCVVAPDIP ECCCCCCCCEEEEEEEECCEEEEEECCCCCHHHCCCCCCHHHHHHHHHHEEEEEECCCCC NNWASLGFFTVSSPVNILNAERPAPVSLRHVLGHLVPDLVLGAVADALPGQVLAEGAASL CCCHHEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEE WNIHLSLRPVAGGAGRRAEVLMFNSGGMGARPGLDGLSATAFPSGVHTMPIEATEQTGPV EEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCE VIWRKELRPDSGGDGTYRGGLGQIIEIAAAEGHEFDFSAMFDRITYPARGRAGGGQGAPG EEEHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC GVRLDDGTKMRGKGWQHVPAGRRLILTLPGGGGYGPPEGRSDAARHDDAIKGYVTESEH CEEECCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHCCCEECCCC >Mature Secondary Structure SEIDDIRMQVMWNRLISVVEEQAMTLLRTAFSTSVREAGDLSAGVFDPMGRMLAQAVTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC TPGHVNTMAEAVGNFMAEIPRAEMYEGDTYVTNDPWKGTGHLHDITMVSPSFLDGELVGF CCCHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHH FACTAHVVDVGGRGFGADGKSVYEEGIQIPIMKFAERGTVNRDLVRILRQNVREPNQVVG HHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHH DFYSLAACNDVGHRRLVEMMREVGLASLDPLADFIFTRTSSAMAERIRALPKGSWSNTMV HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEE TDGYDEAIPLAACVTIRDESVHVDFTGSAPVSRWGINVPISYTKAYASYALKCVVAPDIP ECCCCCCCCEEEEEEEECCEEEEEECCCCCHHHCCCCCCHHHHHHHHHHEEEEEECCCCC NNWASLGFFTVSSPVNILNAERPAPVSLRHVLGHLVPDLVLGAVADALPGQVLAEGAASL CCCHHEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEE WNIHLSLRPVAGGAGRRAEVLMFNSGGMGARPGLDGLSATAFPSGVHTMPIEATEQTGPV EEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCE VIWRKELRPDSGGDGTYRGGLGQIIEIAAAEGHEFDFSAMFDRITYPARGRAGGGQGAPG EEEHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC GVRLDDGTKMRGKGWQHVPAGRRLILTLPGGGGYGPPEGRSDAARHDDAIKGYVTESEH CEEECCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]