Click here to switch to the map view.

The map label for this gene is tetR [C]

Identifier: 158423969

GI number: 158423969

Start: 2670378

End: 2671127

Strand: Reverse

Name: tetR [C]

Synonym: AZC_2345

Alternate gene names: 158423969

Gene position: 2671127-2670378 (Counterclockwise)

Preceding gene: 158423970

Following gene: 158423961

Centisome position: 49.74

GC content: 65.87

Gene sequence:

>750_bases
ATGGGGGCGGGTGCGCCGGAAACGCCCAGCCGTGCCCGTGCGCCGGCGAAGTCCAAGGCCGCGGAGGGGGGACGCGTGGT
ACGGACCCGCGACCCGGAGCGCACCAAGGCAAGCATCCTCTCCGCTGCCACCGCCGAATTTTCCGCCCGCGGTTTCGCCG
GGGCGGGCATCGACGCCATCGCCTCGCGCTCGGGCGCCAACCGGCGGATGATCTATCATTATTTCGGCTCCAAGCGCGGA
CTTTGGCTGGCCGTGCTGGAGGCCGCCTACGAGCGAGCGCGCACCTCGGAACTGAAGCTCAATCTCGAAAGCCTCTCTCC
CGAGGACGCCATGCGGCGGCTCGTGACCTTCACGTTCGACAGCTTCATCGGCGAGCGCACCTTCATCAACCTGCTGAACA
GCGAAAACCTGCATCAGGCCCGGCACCTGAAGGAATCCGAGCGGGTGAAGGACATGCATTCACCGCTTATCGGCATGATC
AGCGCCATCGTCGAGCGGGGCGTGAAGGAGGGCGTGTTCCGGGACGGACACGATCCGGCGCAGCTCTGGATCTCCATTGC
CGGCCTGTCCTATTTCTATTTCTCGAACATCTTCACGCTGTCGGTCATCCTCAACCGCGACCTGGCGTCCAAGAAGGAAC
TGGCCGCCCGCCGCGCCCATGTGGCCGAACTGGTCCTCAATGCCCTGCGTCTGCCGCCGCAGGAGGCGACCCTGTCGGCG
CTCGGCTCGGATCCGGTCCAGAGGACCTGA

Upstream 100 bases:

>100_bases
GTATCTCCCGTCACCGCTCCGTCGTATAAGCGGCAAAACGGCTGGAGCGAGGGGCAAAGTGGCACGCGTGGCTGGTGCGA
GCGGGCTGGACGAGCAGGAC

Downstream 100 bases:

>100_bases
GCCGCGGGCAGCGTCACCCCCCTTTCACCGCTTGATCTTCGCGGTGTTGAATTCGACCGCTGCGTGGACCAGTTCAGCAA
ACGCGCCCGGGTCGATGACG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator TetR/ArcR Family; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Tetr Family; TetR-Family Transcriptional Regulator; TetR-Family Transcriptional Regulatory Protein; TRANSCRIPTIONal REGULATOR TetR Family; Transcription Regulator Protein Tetr-Like; Transcription Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MGAGAPETPSRARAPAKSKAAEGGRVVRTRDPERTKASILSAATAEFSARGFAGAGIDAIASRSGANRRMIYHYFGSKRG
LWLAVLEAAYERARTSELKLNLESLSPEDAMRRLVTFTFDSFIGERTFINLLNSENLHQARHLKESERVKDMHSPLIGMI
SAIVERGVKEGVFRDGHDPAQLWISIAGLSYFYFSNIFTLSVILNRDLASKKELAARRAHVAELVLNALRLPPQEATLSA
LGSDPVQRT

Sequences:

>Translated_249_residues
MGAGAPETPSRARAPAKSKAAEGGRVVRTRDPERTKASILSAATAEFSARGFAGAGIDAIASRSGANRRMIYHYFGSKRG
LWLAVLEAAYERARTSELKLNLESLSPEDAMRRLVTFTFDSFIGERTFINLLNSENLHQARHLKESERVKDMHSPLIGMI
SAIVERGVKEGVFRDGHDPAQLWISIAGLSYFYFSNIFTLSVILNRDLASKKELAARRAHVAELVLNALRLPPQEATLSA
LGSDPVQRT
>Mature_248_residues
GAGAPETPSRARAPAKSKAAEGGRVVRTRDPERTKASILSAATAEFSARGFAGAGIDAIASRSGANRRMIYHYFGSKRGL
WLAVLEAAYERARTSELKLNLESLSPEDAMRRLVTFTFDSFIGERTFINLLNSENLHQARHLKESERVKDMHSPLIGMIS
AIVERGVKEGVFRDGHDPAQLWISIAGLSYFYFSNIFTLSVILNRDLASKKELAARRAHVAELVLNALRLPPQEATLSAL
GSDPVQRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27352; Mature: 27220

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGAPETPSRARAPAKSKAAEGGRVVRTRDPERTKASILSAATAEFSARGFAGAGIDAI
CCCCCCCCCHHHCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ASRSGANRRMIYHYFGSKRGLWLAVLEAAYERARTSELKLNLESLSPEDAMRRLVTFTFD
HHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHH
SFIGERTFINLLNSENLHQARHLKESERVKDMHSPLIGMISAIVERGVKEGVFRDGHDPA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QLWISIAGLSYFYFSNIFTLSVILNRDLASKKELAARRAHVAELVLNALRLPPQEATLSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGSDPVQRT
HCCCCCCCC
>Mature Secondary Structure 
GAGAPETPSRARAPAKSKAAEGGRVVRTRDPERTKASILSAATAEFSARGFAGAGIDAI
CCCCCCCCHHHCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ASRSGANRRMIYHYFGSKRGLWLAVLEAAYERARTSELKLNLESLSPEDAMRRLVTFTFD
HHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHH
SFIGERTFINLLNSENLHQARHLKESERVKDMHSPLIGMISAIVERGVKEGVFRDGHDPA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QLWISIAGLSYFYFSNIFTLSVILNRDLASKKELAARRAHVAELVLNALRLPPQEATLSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGSDPVQRT
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA