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The map label for this gene is ycjR [C]

Identifier: 158423970

GI number: 158423970

Start: 2671199

End: 2672101

Strand: Reverse

Name: ycjR [C]

Synonym: AZC_2346

Alternate gene names: 158423970

Gene position: 2672101-2671199 (Counterclockwise)

Preceding gene: 158423971

Following gene: 158423969

Centisome position: 49.76

GC content: 68.44

Gene sequence:

>903_bases
ATGCAGGACCGTGTCGCACCCAGCGCCCTCAAGCCCGCCCTGAGGGACTTCTCGGCGGATCACCGCCTGCTCTCCATCAA
CACCGCGACGGTGCGCAGGCAGGGCGATCTTGCGACCATCATCGAGGCGTGCGCGCGGGCGCAGATCCGCGCCATCTCGC
CCTGGCGGGATCAGGTGGCCCATATCGGCCTGCCCCGCGCCGTTGAGGCGGTGAAGGCGACCGGCCTCGCGCTCTCGGGC
TATTGCCGGGGCGGCATGTTCCCGGCCGATCCCGCGCGCCTGCCGGAGGTGCGCGACGACAACCGCCGCGCGGTGGATGA
GGCGGAGGCTCTGGGCGCGTCCTGCCTCGTTCTCGTGGTGGGTGGCCTGCCGCAATATGCCCGGCCGGGCTCGGCGCCTT
CGAAGGACATCGGGGCCGCCCGTGCCATGGTGGAGGACGGCATCGGCACGCTACTGGAGTACGCCCGCAGCGCCCACATG
CCTCTCGCCATCGAGCCGCTCCATCCCATGTATGCCGCTGACCGTGCATGCGTGAACACCATGGGTCAGGCGCTCGACAT
CTGCGACCGGCTGGACCCGGAGCGGAGCGGGATGCTGGGCGTCGCGCTGGATGTATTCCATGTCTGGTGGGACCCGGACC
TGTCCGCCCAGATCGTGCGGGCGGGCCGCGATCGGCTGCTGGCCTATCACGTGTGCGACTGGCTGGTGCCCATGGCCGAC
ATGCTGAACGACCGCGGCATGATGGGTGACGGCGTGATCGACCTGAAAGCCATCCGCGCACAGGTGGAAGCCCAAGGGTA
TCAAGGCTTCGCGGAAGTGGAGATCTTCTCCGAGCACTGGTGGGCGAAGCCGATGGAGGAGGTGCTTGGCACCTGTATCT
CCCGTCACCGCTCCGTCGTATAA

Upstream 100 bases:

>100_bases
CTGTTCCGTCTTGCGGATCGGGCCGGGCTGCTGACCGATCCGGATCTGGCGGTGCAGCGGATGCGTGCCGTGCTCGCCGT
GCGTGGCGTGGAGGCCTGAG

Downstream 100 bases:

>100_bases
GCGGCAAAACGGCTGGAGCGAGGGGCAAAGTGGCACGCGTGGCTGGTGCGAGCGGGCTGGACGAGCAGGACATGGGGGCG
GGTGCGCCGGAAACGCCCAG

Product: sugar phosphate isomerases

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain-Containing Protein TIM Barrel; 3-Dehydroshikimate Dehydratase; Endonuclease Protein; Sugar Phosphate Isomerases; Xylose Isomerase-Like Protein; Endonuclease; Xlose Isomerase Domain-Containing Protein

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MQDRVAPSALKPALRDFSADHRLLSINTATVRRQGDLATIIEACARAQIRAISPWRDQVAHIGLPRAVEAVKATGLALSG
YCRGGMFPADPARLPEVRDDNRRAVDEAEALGASCLVLVVGGLPQYARPGSAPSKDIGAARAMVEDGIGTLLEYARSAHM
PLAIEPLHPMYAADRACVNTMGQALDICDRLDPERSGMLGVALDVFHVWWDPDLSAQIVRAGRDRLLAYHVCDWLVPMAD
MLNDRGMMGDGVIDLKAIRAQVEAQGYQGFAEVEIFSEHWWAKPMEEVLGTCISRHRSVV

Sequences:

>Translated_300_residues
MQDRVAPSALKPALRDFSADHRLLSINTATVRRQGDLATIIEACARAQIRAISPWRDQVAHIGLPRAVEAVKATGLALSG
YCRGGMFPADPARLPEVRDDNRRAVDEAEALGASCLVLVVGGLPQYARPGSAPSKDIGAARAMVEDGIGTLLEYARSAHM
PLAIEPLHPMYAADRACVNTMGQALDICDRLDPERSGMLGVALDVFHVWWDPDLSAQIVRAGRDRLLAYHVCDWLVPMAD
MLNDRGMMGDGVIDLKAIRAQVEAQGYQGFAEVEIFSEHWWAKPMEEVLGTCISRHRSVV
>Mature_300_residues
MQDRVAPSALKPALRDFSADHRLLSINTATVRRQGDLATIIEACARAQIRAISPWRDQVAHIGLPRAVEAVKATGLALSG
YCRGGMFPADPARLPEVRDDNRRAVDEAEALGASCLVLVVGGLPQYARPGSAPSKDIGAARAMVEDGIGTLLEYARSAHM
PLAIEPLHPMYAADRACVNTMGQALDICDRLDPERSGMLGVALDVFHVWWDPDLSAQIVRAGRDRLLAYHVCDWLVPMAD
MLNDRGMMGDGVIDLKAIRAQVEAQGYQGFAEVEIFSEHWWAKPMEEVLGTCISRHRSVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32730; Mature: 32730

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDRVAPSALKPALRDFSADHRLLSINTATVRRQGDLATIIEACARAQIRAISPWRDQVA
CCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH
HIGLPRAVEAVKATGLALSGYCRGGMFPADPARLPEVRDDNRRAVDEAEALGASCLVLVV
HCCCHHHHHHHHHHCCEEECHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHH
GGLPQYARPGSAPSKDIGAARAMVEDGIGTLLEYARSAHMPLAIEPLHPMYAADRACVNT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHH
MGQALDICDRLDPERSGMLGVALDVFHVWWDPDLSAQIVRAGRDRLLAYHVCDWLVPMAD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLNDRGMMGDGVIDLKAIRAQVEAQGYQGFAEVEIFSEHWWAKPMEEVLGTCISRHRSVV
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQDRVAPSALKPALRDFSADHRLLSINTATVRRQGDLATIIEACARAQIRAISPWRDQVA
CCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHH
HIGLPRAVEAVKATGLALSGYCRGGMFPADPARLPEVRDDNRRAVDEAEALGASCLVLVV
HCCCHHHHHHHHHHCCEEECHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHH
GGLPQYARPGSAPSKDIGAARAMVEDGIGTLLEYARSAHMPLAIEPLHPMYAADRACVNT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHH
MGQALDICDRLDPERSGMLGVALDVFHVWWDPDLSAQIVRAGRDRLLAYHVCDWLVPMAD
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLNDRGMMGDGVIDLKAIRAQVEAQGYQGFAEVEIFSEHWWAKPMEEVLGTCISRHRSVV
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA