Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is yjcK [H]
Identifier: 158423865
GI number: 158423865
Start: 2560628
End: 2561293
Strand: Direct
Name: yjcK [H]
Synonym: AZC_2241
Alternate gene names: 158423865
Gene position: 2560628-2561293 (Clockwise)
Preceding gene: 158423864
Following gene: 158423867
Centisome position: 47.69
GC content: 68.62
Gene sequence:
>666_bases ATGTGGCTGTTCAAGTCGGTCTTCGCGTCGGATCAGATCCCCGTCGTTCATGGCGACGGGGTATATCTGCGCGTGCCGCA GGCCTCCGATTTCGCGGACTGGCGCGATCTGCGCGAAGCGAGCCGCGATTTCCTCACGCCCTGGGAGCCGGTCTGGCCGG CCGATGATCTCACCCGCGGCTCCTATCGGCGGCGCATGCGGCGCTATGCCCGCGACATGATGGCGGACGAGGCCTATCCG CTCTTCCTGTTTCGGACCCACGACCATGCCCTGCTGGGCGGCATGACGCTCTCCAACGTCCGGCGCGGCGTGTGCCAGTC GGCGAGCCTCGGTTACTGGATGGGCGCGGCCTTTGCGGGGCAGGGCTATATGGGGGCGGGCGTCGCCGCCTTGCTTCCGC TGGCCTATGACGTGTTGCGGCTGCGGCGCATCGAGGCCGCCTGCATGGTCCGCAACACGCCCTCAATCCGGCTGCTGGAG CGTCTCGGCTTCATGCACGAGGGCTATGCCCGACAGTATCTGTGCATCAACGGCCGCTGGGAGGACCACCTTCTGTTTGC CCGTCTGCGCACCGACAGGGCGAAGCCGCGCGAGGCCCGGCCGGACGCTGCCACCCAGTGGGGCGTCGTTCCGGGTGGCC GGGCGGAACGGCCCCTCGTGCGCTGA
Upstream 100 bases:
>100_bases GCGCCTGATCGGGTTTCTCCTGATTTGAGGTGCGGCGCAAACAGGTTCTAGAATGAGACTGCCGTGCGCCCCCGGGAGCA CGGCAGGGGTTATTGCCGTC
Downstream 100 bases:
>100_bases AGCGGCAGGCAGGATCGCGCCTGGAGGTGGCCGTCAGTTGGCGGTCTTGGCGCCGGTCGGAAGGAGCGGGCTCGGCTTGG AGATCTGCTCGATCACGGAC
Product: ribosomal-protein-alanine N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MWLFKSVFASDQIPVVHGDGVYLRVPQASDFADWRDLREASRDFLTPWEPVWPADDLTRGSYRRRMRRYARDMMADEAYP LFLFRTHDHALLGGMTLSNVRRGVCQSASLGYWMGAAFAGQGYMGAGVAALLPLAYDVLRLRRIEAACMVRNTPSIRLLE RLGFMHEGYARQYLCINGRWEDHLLFARLRTDRAKPREARPDAATQWGVVPGGRAERPLVR
Sequences:
>Translated_221_residues MWLFKSVFASDQIPVVHGDGVYLRVPQASDFADWRDLREASRDFLTPWEPVWPADDLTRGSYRRRMRRYARDMMADEAYP LFLFRTHDHALLGGMTLSNVRRGVCQSASLGYWMGAAFAGQGYMGAGVAALLPLAYDVLRLRRIEAACMVRNTPSIRLLE RLGFMHEGYARQYLCINGRWEDHLLFARLRTDRAKPREARPDAATQWGVVPGGRAERPLVR >Mature_221_residues MWLFKSVFASDQIPVVHGDGVYLRVPQASDFADWRDLREASRDFLTPWEPVWPADDLTRGSYRRRMRRYARDMMADEAYP LFLFRTHDHALLGGMTLSNVRRGVCQSASLGYWMGAAFAGQGYMGAGVAALLPLAYDVLRLRRIEAACMVRNTPSIRLLE RLGFMHEGYARQYLCINGRWEDHLLFARLRTDRAKPREARPDAATQWGVVPGGRAERPLVR
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5 [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787305, Length=161, Percent_Identity=34.1614906832298, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 25320; Mature: 25320
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLFKSVFASDQIPVVHGDGVYLRVPQASDFADWRDLREASRDFLTPWEPVWPADDLTRG CCCHHHHHCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH SYRRRMRRYARDMMADEAYPLFLFRTHDHALLGGMTLSNVRRGVCQSASLGYWMGAAFAG HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCC QGYMGAGVAALLPLAYDVLRLRRIEAACMVRNTPSIRLLERLGFMHEGYARQYLCINGRW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHCCCCCEEEEECCCC EDHLLFARLRTDRAKPREARPDAATQWGVVPGGRAERPLVR CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MWLFKSVFASDQIPVVHGDGVYLRVPQASDFADWRDLREASRDFLTPWEPVWPADDLTRG CCCHHHHHCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH SYRRRMRRYARDMMADEAYPLFLFRTHDHALLGGMTLSNVRRGVCQSASLGYWMGAAFAG HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCC QGYMGAGVAALLPLAYDVLRLRRIEAACMVRNTPSIRLLERLGFMHEGYARQYLCINGRW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHCCCCCEEEEECCCC EDHLLFARLRTDRAKPREARPDAATQWGVVPGGRAERPLVR CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]