Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423740
Identifier: 158423740
GI number: 158423740
Start: 2432876
End: 2434588
Strand: Direct
Name: 158423740
Synonym: AZC_2116
Alternate gene names: NA
Gene position: 2432876-2434588 (Clockwise)
Preceding gene: 158423739
Following gene: 158423741
Centisome position: 45.31
GC content: 67.89
Gene sequence:
>1713_bases ATGACCGCCATCGACCCCGTCACACTCGCCGTCCTGAAGGGGCGGCTGGAGCAGATCGCCGACGAGATGGATGCGACGCT CTACCGCTCCGCTTTCAATCCCATCATCGCCGAGGCCCGTGACGCCTGCCACGGCCTCTATCATGCGGAAACCGGCGACA CGCTGGTGCAGGGCACCAAGGGCCTGCCGATCTTCGTGGGCGCGATGGCCTTCGCGGTGCGGGCGGTGATCGAGAAGGTG GCGCGCGACGGCGACCTCCAGCCGGGCGACAGCTTCCTGTTCAACGACCCCTATGCGGGCGGCACGCATCTGAACGATTT CCGCCTCGTGCGGCCGATCTTCCGGGGCGGCAAGCTCTATTGCTGGCTGGCCTCCGTGGGCCACTGGCTGGACATCGGCG GCAATGTCCCCGGCGGCTTCAACGCGCGGGCGACGGAGAGCTTCCAGGAAGGCGTGCGCATTCCGCCCGTGAAGCTGTTC AAGGCCGGCGTGCTCAATCACGACATCATCGAGATACTCTCGGCCAATTCCCGCGTGCCGGTCTCCAACTATGGCGACCT CAACGGCCAATTGAACGCGCTCGATCTCGGTGAGCGGCGGCTGGCGGAACTGCTCGACGCCTATGGCGAGAACATCGTGG CGCAGGCCTTCGATGCCTTCTCCGACCGCGCCGAGGCCATGATGCGCGCCGCCATCCGCGCCCTGCCGGACGGCATCTAT TCGTTCGAGGATTATCTCGACAATGACGGCATCACGCCGGACCGCCTGACCATCGCCCTCGACCTGACGGTGGACGGCGA AAAGATGACGCTCGATTTCTCGCGCTCCTCCGCCCCCTGCGCAGGGCCGCTCAACATCGCCTATTCCACGGCGGCGGCCT GCTGCTATGTGGCGCTGAAGCACGTCTTCACCGACGTTCCGGCCAATGCCGGGTGCCTCAGGCCCATCACCTTCGTCATC CCCGAGACGACGCTGCTGGGTGTGAAGCCGCCCAAGCCCGTGGGCGGCTATACGGAGACGATCCTGCGCGTCATCGGCGT CGTCTTCGGCGCGCTGGCCAAGGCTGACCCCGCCCGCGCCACGGCCGCGCCCTTCGGGACCATCAACGCCCTCTCGCTCG CCGGCCACCGGCCGGATGGATCGCGCTGGGTGATGTTCTCCTTCTTCGGCGGCGGCCTCGGCGGCAATCCGGAGAGCGAT GGCCTCAGCCACGCCAACAACCCCATTTCCATGGCCACCATTCCGCCGGCCGAGATTTTGGAAGCCGCCTATCCCGTGCT GTTCACCCAGTGGGCGCTGCGGCCGGATTCCGCTGGCGCTGGCGCCCATCGCGGCGGCCTCGGCGCGGTCTATGAGATCG AGCCGCTCACCGATGCGGATGTGTTTCTGCTCGGCGAGCGCGGCATCTATCCCCCCTTCGGGGTGGCTGGCGGCACGCCC GCCGCGCTGAACGTCTTCTCGTGGGAGACCGAGGATGGCGAGCGCTCGCCCCCGCTCGCCTCCAAGGTGACGGACGTGAA GGTGCGCGCCGGCCAGCGCGTGCGCCTGGAAACCCCCGGCGGTGGCGGCTACGGCGACCCCAAGGACCGCAAGCGCGAGG ATGTGGAGCGCGATGTCCGGCAGGGCCTCGTGAGCGTTGAAGCCGCCCGCACCCTCTATGGCGTCGAGATCACGCCGGAC ACCACCATTCCGGCGCAGGGAGCAGCCGCATGA
Upstream 100 bases:
>100_bases ACGGCCTCATCGGCACCGCCGACCTGCTGGCCCAAGGGCGTGAGTATGATGTCTTCGGCGCGGCTCTGGCCGATGCGCCG CTCACCAGGAAAGCCGCGCG
Downstream 100 bases:
>100_bases ACGCCCATACCGCAACCCCTGAGGCCAAGCCCGCGCCGGTGGTCGGCGTGGATGTGGGCGGCACCTTCACCGACCTCTTC TTCTTCGATGCCGCCGCCGG
Product: hydantoin utilization protein B
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MTAIDPVTLAVLKGRLEQIADEMDATLYRSAFNPIIAEARDACHGLYHAETGDTLVQGTKGLPIFVGAMAFAVRAVIEKV ARDGDLQPGDSFLFNDPYAGGTHLNDFRLVRPIFRGGKLYCWLASVGHWLDIGGNVPGGFNARATESFQEGVRIPPVKLF KAGVLNHDIIEILSANSRVPVSNYGDLNGQLNALDLGERRLAELLDAYGENIVAQAFDAFSDRAEAMMRAAIRALPDGIY SFEDYLDNDGITPDRLTIALDLTVDGEKMTLDFSRSSAPCAGPLNIAYSTAAACCYVALKHVFTDVPANAGCLRPITFVI PETTLLGVKPPKPVGGYTETILRVIGVVFGALAKADPARATAAPFGTINALSLAGHRPDGSRWVMFSFFGGGLGGNPESD GLSHANNPISMATIPPAEILEAAYPVLFTQWALRPDSAGAGAHRGGLGAVYEIEPLTDADVFLLGERGIYPPFGVAGGTP AALNVFSWETEDGERSPPLASKVTDVKVRAGQRVRLETPGGGGYGDPKDRKREDVERDVRQGLVSVEAARTLYGVEITPD TTIPAQGAAA
Sequences:
>Translated_570_residues MTAIDPVTLAVLKGRLEQIADEMDATLYRSAFNPIIAEARDACHGLYHAETGDTLVQGTKGLPIFVGAMAFAVRAVIEKV ARDGDLQPGDSFLFNDPYAGGTHLNDFRLVRPIFRGGKLYCWLASVGHWLDIGGNVPGGFNARATESFQEGVRIPPVKLF KAGVLNHDIIEILSANSRVPVSNYGDLNGQLNALDLGERRLAELLDAYGENIVAQAFDAFSDRAEAMMRAAIRALPDGIY SFEDYLDNDGITPDRLTIALDLTVDGEKMTLDFSRSSAPCAGPLNIAYSTAAACCYVALKHVFTDVPANAGCLRPITFVI PETTLLGVKPPKPVGGYTETILRVIGVVFGALAKADPARATAAPFGTINALSLAGHRPDGSRWVMFSFFGGGLGGNPESD GLSHANNPISMATIPPAEILEAAYPVLFTQWALRPDSAGAGAHRGGLGAVYEIEPLTDADVFLLGERGIYPPFGVAGGTP AALNVFSWETEDGERSPPLASKVTDVKVRAGQRVRLETPGGGGYGDPKDRKREDVERDVRQGLVSVEAARTLYGVEITPD TTIPAQGAAA >Mature_569_residues TAIDPVTLAVLKGRLEQIADEMDATLYRSAFNPIIAEARDACHGLYHAETGDTLVQGTKGLPIFVGAMAFAVRAVIEKVA RDGDLQPGDSFLFNDPYAGGTHLNDFRLVRPIFRGGKLYCWLASVGHWLDIGGNVPGGFNARATESFQEGVRIPPVKLFK AGVLNHDIIEILSANSRVPVSNYGDLNGQLNALDLGERRLAELLDAYGENIVAQAFDAFSDRAEAMMRAAIRALPDGIYS FEDYLDNDGITPDRLTIALDLTVDGEKMTLDFSRSSAPCAGPLNIAYSTAAACCYVALKHVFTDVPANAGCLRPITFVIP ETTLLGVKPPKPVGGYTETILRVIGVVFGALAKADPARATAAPFGTINALSLAGHRPDGSRWVMFSFFGGGLGGNPESDG LSHANNPISMATIPPAEILEAAYPVLFTQWALRPDSAGAGAHRGGLGAVYEIEPLTDADVFLLGERGIYPPFGVAGGTPA ALNVFSWETEDGERSPPLASKVTDVKVRAGQRVRLETPGGGGYGDPKDRKREDVERDVRQGLVSVEAARTLYGVEITPDT TIPAQGAAA
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=548, Percent_Identity=33.2116788321168, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI133901900, Length=556, Percent_Identity=30.7553956834532, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI133901902, Length=520, Percent_Identity=30.3846153846154, Blast_Score=177, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6322634, Length=551, Percent_Identity=25.9528130671506, Blast_Score=167, Evalue=5e-42, Organism=Drosophila melanogaster, GI45550492, Length=575, Percent_Identity=29.5652173913043, Blast_Score=176, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 60567; Mature: 60436
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIDPVTLAVLKGRLEQIADEMDATLYRSAFNPIIAEARDACHGLYHAETGDTLVQGTK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHCCCC GLPIFVGAMAFAVRAVIEKVARDGDLQPGDSFLFNDPYAGGTHLNDFRLVRPIFRGGKLY CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCEE CWLASVGHWLDIGGNVPGGFNARATESFQEGVRIPPVKLFKAGVLNHDIIEILSANSRVP EECCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCC VSNYGDLNGQLNALDLGERRLAELLDAYGENIVAQAFDAFSDRAEAMMRAAIRALPDGIY CCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SFEDYLDNDGITPDRLTIALDLTVDGEKMTLDFSRSSAPCAGPLNIAYSTAAACCYVALK HHHHHHCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH HVFTDVPANAGCLRPITFVIPETTLLGVKPPKPVGGYTETILRVIGVVFGALAKADPARA HHHHCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC TAAPFGTINALSLAGHRPDGSRWVMFSFFGGGLGGNPESDGLSHANNPISMATIPPAEIL CCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHH EAAYPVLFTQWALRPDSAGAGAHRGGLGAVYEIEPLTDADVFLLGERGIYPPFGVAGGTP HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCC AALNVFSWETEDGERSPPLASKVTDVKVRAGQRVRLETPGGGGYGDPKDRKREDVERDVR CEEEEEEECCCCCCCCCCHHHHCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHH QGLVSVEAARTLYGVEITPDTTIPAQGAAA HHHHHHHHHHHEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TAIDPVTLAVLKGRLEQIADEMDATLYRSAFNPIIAEARDACHGLYHAETGDTLVQGTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHCCCC GLPIFVGAMAFAVRAVIEKVARDGDLQPGDSFLFNDPYAGGTHLNDFRLVRPIFRGGKLY CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCEE CWLASVGHWLDIGGNVPGGFNARATESFQEGVRIPPVKLFKAGVLNHDIIEILSANSRVP EECCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHCCCCCCC VSNYGDLNGQLNALDLGERRLAELLDAYGENIVAQAFDAFSDRAEAMMRAAIRALPDGIY CCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SFEDYLDNDGITPDRLTIALDLTVDGEKMTLDFSRSSAPCAGPLNIAYSTAAACCYVALK HHHHHHCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH HVFTDVPANAGCLRPITFVIPETTLLGVKPPKPVGGYTETILRVIGVVFGALAKADPARA HHHHCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC TAAPFGTINALSLAGHRPDGSRWVMFSFFGGGLGGNPESDGLSHANNPISMATIPPAEIL CCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHH EAAYPVLFTQWALRPDSAGAGAHRGGLGAVYEIEPLTDADVFLLGERGIYPPFGVAGGTP HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCC AALNVFSWETEDGERSPPLASKVTDVKVRAGQRVRLETPGGGGYGDPKDRKREDVERDVR CEEEEEEECCCCCCCCCCHHHHCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHH QGLVSVEAARTLYGVEITPDTTIPAQGAAA HHHHHHHHHHHEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]