Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is braD [H]
Identifier: 158423734
GI number: 158423734
Start: 2427206
End: 2428081
Strand: Direct
Name: braD [H]
Synonym: AZC_2110
Alternate gene names: 158423734
Gene position: 2427206-2428081 (Clockwise)
Preceding gene: 158423733
Following gene: 158423735
Centisome position: 45.2
GC content: 64.16
Gene sequence:
>876_bases TTGATGTATTCGCTCCCCATCCTTCTGGAAGCCACGGTGAACGGGCTGCTCACCGGCGCGATCTACGCGCTGGTGGCGCT CGGTCTAACGCTTGTCTATGGCGTCCTGCACATCATCAATTTCGCCCATGGCGCGTTCCTGACGCTGGCCATGTTCGCGG TATGGATCGCCTTCAGCGTCTTCGGGCTCGATCCGTATCTGGCCATTCCCGTGCTGGCGCTGCTGTTCTTCGCCGTCGGC TATGGCACGCAGCGCTATGTGATCGGCCCGGCGAGCCATGGGGATGACGGCAATATCCTGCTGGTGACGCTCGGCCTCTC CATAGTGCTGGAGAATGTGCTGCTGGCACTGTTCCGCGCCGATACGCGCACCATCGCCACCGATTATGCCTTCGACGTGT TCGAGGTGGGCCCGATGCTCATCTCCCGTGCGCGGCTCTATGGCTTCCTTGCCGCCATGGTGGTGGCGGTGCTGCTGTGG CTGCTGCTGGCCCGCACCGACACCGGCAAGGCCATCCGCGCCGTCGCCAAGGAGAAGCTGGGCGCGAGTCTCGTCGGCAT CAATGTGAAGCACATCTTCGCCGTGACCTTCGGCATCGGTTGCGCGACGCTCGCTATCGCCGCCTGCCTGCTGATGCCCA TCTTCTATGTGAACCCGCGCGTCGGTCAGGCCTTCGTGCTGGTGGCCTTCACCATCGTGGTGCTGGGCGGCATGGGCTCC ATTCCCGGCGCGGTCATCGGCGGGCTGTTCATCGGCGTGGTGGAGAGCCTCACAGGCCTCTTCCTCGGCGACAGCCTGGG CCAGATCGGCATCTTCCTCATCTTCATCCTTGTCCTGCTGCTGCGGCCCAGCGGCCTGTTCGGAGCCCGGGCCTGA
Upstream 100 bases:
>100_bases CATCTTCCCGGTCCGGTCCTGATCCCCGTGGCGCCGGAGCGATCCGGCGCCGTCCCCTCGATGCACCGGCCCATGGGCCG GTCAGCGAGCGCTGGATGAT
Downstream 100 bases:
>100_bases TGACGCGCGGCATCCTCCCCCTTCTCGCCCTTGTGGTACTCATCGCGGCGCTGCCGCTGGTGACGGCCTCCAACACGGCC ATCAATTTCGTCGTCTTCGT
Product: branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MMYSLPILLEATVNGLLTGAIYALVALGLTLVYGVLHIINFAHGAFLTLAMFAVWIAFSVFGLDPYLAIPVLALLFFAVG YGTQRYVIGPASHGDDGNILLVTLGLSIVLENVLLALFRADTRTIATDYAFDVFEVGPMLISRARLYGFLAAMVVAVLLW LLLARTDTGKAIRAVAKEKLGASLVGINVKHIFAVTFGIGCATLAIAACLLMPIFYVNPRVGQAFVLVAFTIVVLGGMGS IPGAVIGGLFIGVVESLTGLFLGDSLGQIGIFLIFILVLLLRPSGLFGARA
Sequences:
>Translated_291_residues MMYSLPILLEATVNGLLTGAIYALVALGLTLVYGVLHIINFAHGAFLTLAMFAVWIAFSVFGLDPYLAIPVLALLFFAVG YGTQRYVIGPASHGDDGNILLVTLGLSIVLENVLLALFRADTRTIATDYAFDVFEVGPMLISRARLYGFLAAMVVAVLLW LLLARTDTGKAIRAVAKEKLGASLVGINVKHIFAVTFGIGCATLAIAACLLMPIFYVNPRVGQAFVLVAFTIVVLGGMGS IPGAVIGGLFIGVVESLTGLFLGDSLGQIGIFLIFILVLLLRPSGLFGARA >Mature_291_residues MMYSLPILLEATVNGLLTGAIYALVALGLTLVYGVLHIINFAHGAFLTLAMFAVWIAFSVFGLDPYLAIPVLALLFFAVG YGTQRYVIGPASHGDDGNILLVTLGLSIVLENVLLALFRADTRTIATDYAFDVFEVGPMLISRARLYGFLAAMVVAVLLW LLLARTDTGKAIRAVAKEKLGASLVGINVKHIFAVTFGIGCATLAIAACLLMPIFYVNPRVGQAFVLVAFTIVVLGGMGS IPGAVIGGLFIGVVESLTGLFLGDSLGQIGIFLIFILVLLLRPSGLFGARA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=299, Percent_Identity=33.1103678929766, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 30709; Mature: 30709
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMYSLPILLEATVNGLLTGAIYALVALGLTLVYGVLHIINFAHGAFLTLAMFAVWIAFSV CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLDPYLAIPVLALLFFAVGYGTQRYVIGPASHGDDGNILLVTLGLSIVLENVLLALFRA HCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH DTRTIATDYAFDVFEVGPMLISRARLYGFLAAMVVAVLLWLLLARTDTGKAIRAVAKEKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GASLVGINVKHIFAVTFGIGCATLAIAACLLMPIFYVNPRVGQAFVLVAFTIVVLGGMGS CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC IPGAVIGGLFIGVVESLTGLFLGDSLGQIGIFLIFILVLLLRPSGLFGARA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMYSLPILLEATVNGLLTGAIYALVALGLTLVYGVLHIINFAHGAFLTLAMFAVWIAFSV CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLDPYLAIPVLALLFFAVGYGTQRYVIGPASHGDDGNILLVTLGLSIVLENVLLALFRA HCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH DTRTIATDYAFDVFEVGPMLISRARLYGFLAAMVVAVLLWLLLARTDTGKAIRAVAKEKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GASLVGINVKHIFAVTFGIGCATLAIAACLLMPIFYVNPRVGQAFVLVAFTIVVLGGMGS CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC IPGAVIGGLFIGVVESLTGLFLGDSLGQIGIFLIFILVLLLRPSGLFGARA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]