Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is livK [C]
Identifier: 158423733
GI number: 158423733
Start: 2425904
End: 2427127
Strand: Direct
Name: livK [C]
Synonym: AZC_2109
Alternate gene names: 158423733
Gene position: 2425904-2427127 (Clockwise)
Preceding gene: 158423732
Following gene: 158423734
Centisome position: 45.18
GC content: 67.97
Gene sequence:
>1224_bases ATGACCATCTGGACGACGCCTCTCGGCCGTCGTGCGGTCCTGAAGGGCAGCACGGCAGCGCTTGCGACCCTCGCCATGCC CGCCATCGTGCGCGGTGCTGAGCCCGCGCCCATCAAGGTGGGCGTGCTCCAGCCGGTCACCGGCGCGCTGGCCATGGATG GTGAATATGGCCGCACCGGTGCCGAATTCGCCATCGCCGCCGTGAACGCGGCGGGCGGCATCAAGTCGCTCGGCGGCGCC AAGCTTGAGATGGTGTTCGGCGATGCCCGATCGAACCCCGAGGCGGGCACGCAGGAAGTGGAGCGGATGCAGGGCGAGGG CGTGGTGGCCGTCGTCGGCGGCTTCGCCAGCGGCATCTGCCTTGCCGCCAGCCAGACCGCTGCGCGCTATGACCTGCCCT ATCTCGTGGACGTGGGCGTCTCGGATCAGATCGTCCAGCGCGGCCTCAAGAACACCTTCCGCTTCGGCCCCGGCTTCGGC GTCTGCACACGGTCGGCCCTCGATAATCTCGCCCGCATCAACGAGGCCGCCGGCAAGCCGGCCAAGACCGTCGTGCTGGT GCACGAGGATGGCTTGTTCGGCAGTGGCCTCGCCAAGGTGATGCAGGCGGAACTGCCCAAGCTCGGCTTCGAGATCCTCG ACACCATTCCGGTGCCGACCCCCTCGCGTGATCTGTCCAACGTGGTGCTGCGCCTGCGCTCGCTGAACCCGGACATCGTG ATGCCGAGCACCTACTACGGCGAGACGGTGCTGCTCGCCCGCACCATGCAGCAGCAGCGCGTGCGGCCGAAGGCGGTCTA TGGCGTGCTGAACGGCGCCGCCTCCAACATGCGCTTCGTGAAGGAATTCCCCGAAGCCGCCGACAAGATCATGGACTGCA ATCACTGGTACGACCCGCGCAAGGCAGGCGCCCAGGCGCTGCTGAAGGCGGTGGCGGATGCCGGCAAGGGCTGGAACTAC AACCTGCCCATGAACTATTCCTGCGTCGGCCTGCTGGCGGACGCGCTGGAGCGCGCCGGCTCCACGGACCGCGCCAAGGT GATCGACGCGCTTGCCGCCTCCACCTGGGCGGACCATGTGATGCCCTACGGCCCCACCAAGTTCGTGGACGGCCAGAACC AGGGCGCGGCTCCGGTCTCGCTTCAGGTGCAGAACGGTGCCATCCGCGTCGTCTATCCGGAGGCCTTCTCCGACGCCAAG GCCATCTTCCCGGTCCGGTCCTGA
Upstream 100 bases:
>100_bases TCGCCGTTCCGCGCGGTCTCGAAACCAAGGCCGCAGCCAAAGCACCGGCCAATCAGAAAAGACGCCCGAAAAGGGCCGAT CCTCAGAGGAGAACTGCGAG
Downstream 100 bases:
>100_bases TCCCCGTGGCGCCGGAGCGATCCGGCGCCGTCCCCTCGATGCACCGGCCCATGGGCCGGTCAGCGAGCGCTGGATGATTT GATGTATTCGCTCCCCATCC
Product: branched-chain amino acid transporter substrate-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTIWTTPLGRRAVLKGSTAALATLAMPAIVRGAEPAPIKVGVLQPVTGALAMDGEYGRTGAEFAIAAVNAAGGIKSLGGA KLEMVFGDARSNPEAGTQEVERMQGEGVVAVVGGFASGICLAASQTAARYDLPYLVDVGVSDQIVQRGLKNTFRFGPGFG VCTRSALDNLARINEAAGKPAKTVVLVHEDGLFGSGLAKVMQAELPKLGFEILDTIPVPTPSRDLSNVVLRLRSLNPDIV MPSTYYGETVLLARTMQQQRVRPKAVYGVLNGAASNMRFVKEFPEAADKIMDCNHWYDPRKAGAQALLKAVADAGKGWNY NLPMNYSCVGLLADALERAGSTDRAKVIDALAASTWADHVMPYGPTKFVDGQNQGAAPVSLQVQNGAIRVVYPEAFSDAK AIFPVRS
Sequences:
>Translated_407_residues MTIWTTPLGRRAVLKGSTAALATLAMPAIVRGAEPAPIKVGVLQPVTGALAMDGEYGRTGAEFAIAAVNAAGGIKSLGGA KLEMVFGDARSNPEAGTQEVERMQGEGVVAVVGGFASGICLAASQTAARYDLPYLVDVGVSDQIVQRGLKNTFRFGPGFG VCTRSALDNLARINEAAGKPAKTVVLVHEDGLFGSGLAKVMQAELPKLGFEILDTIPVPTPSRDLSNVVLRLRSLNPDIV MPSTYYGETVLLARTMQQQRVRPKAVYGVLNGAASNMRFVKEFPEAADKIMDCNHWYDPRKAGAQALLKAVADAGKGWNY NLPMNYSCVGLLADALERAGSTDRAKVIDALAASTWADHVMPYGPTKFVDGQNQGAAPVSLQVQNGAIRVVYPEAFSDAK AIFPVRS >Mature_406_residues TIWTTPLGRRAVLKGSTAALATLAMPAIVRGAEPAPIKVGVLQPVTGALAMDGEYGRTGAEFAIAAVNAAGGIKSLGGAK LEMVFGDARSNPEAGTQEVERMQGEGVVAVVGGFASGICLAASQTAARYDLPYLVDVGVSDQIVQRGLKNTFRFGPGFGV CTRSALDNLARINEAAGKPAKTVVLVHEDGLFGSGLAKVMQAELPKLGFEILDTIPVPTPSRDLSNVVLRLRSLNPDIVM PSTYYGETVLLARTMQQQRVRPKAVYGVLNGAASNMRFVKEFPEAADKIMDCNHWYDPRKAGAQALLKAVADAGKGWNYN LPMNYSCVGLLADALERAGSTDRAKVIDALAASTWADHVMPYGPTKFVDGQNQGAAPVSLQVQNGAIRVVYPEAFSDAKA IFPVRS
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=342, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI48994941, Length=245, Percent_Identity=27.3469387755102, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42992; Mature: 42861
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIWTTPLGRRAVLKGSTAALATLAMPAIVRGAEPAPIKVGVLQPVTGALAMDGEYGRTG CEEECCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCC AEFAIAAVNAAGGIKSLGGAKLEMVFGDARSNPEAGTQEVERMQGEGVVAVVGGFASGIC CCEEEEEEECCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCE LAASQTAARYDLPYLVDVGVSDQIVQRGLKNTFRFGPGFGVCTRSALDNLARINEAAGKP EECCCHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC AKTVVLVHEDGLFGSGLAKVMQAELPKLGFEILDTIPVPTPSRDLSNVVLRLRSLNPDIV CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEE MPSTYYGETVLLARTMQQQRVRPKAVYGVLNGAASNMRFVKEFPEAADKIMDCNHWYDPR CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH KAGAQALLKAVADAGKGWNYNLPMNYSCVGLLADALERAGSTDRAKVIDALAASTWADHV HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC MPYGPTKFVDGQNQGAAPVSLQVQNGAIRVVYPEAFSDAKAIFPVRS CCCCCCEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure TIWTTPLGRRAVLKGSTAALATLAMPAIVRGAEPAPIKVGVLQPVTGALAMDGEYGRTG EEECCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCC AEFAIAAVNAAGGIKSLGGAKLEMVFGDARSNPEAGTQEVERMQGEGVVAVVGGFASGIC CCEEEEEEECCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCE LAASQTAARYDLPYLVDVGVSDQIVQRGLKNTFRFGPGFGVCTRSALDNLARINEAAGKP EECCCHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC AKTVVLVHEDGLFGSGLAKVMQAELPKLGFEILDTIPVPTPSRDLSNVVLRLRSLNPDIV CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEE MPSTYYGETVLLARTMQQQRVRPKAVYGVLNGAASNMRFVKEFPEAADKIMDCNHWYDPR CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH KAGAQALLKAVADAGKGWNYNLPMNYSCVGLLADALERAGSTDRAKVIDALAASTWADHV HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC MPYGPTKFVDGQNQGAAPVSLQVQNGAIRVVYPEAFSDAKAIFPVRS CCCCCCEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA