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The map label for this gene is gntR [H]

Identifier: 158423732

GI number: 158423732

Start: 2425047

End: 2425907

Strand: Direct

Name: gntR [H]

Synonym: AZC_2108

Alternate gene names: 158423732

Gene position: 2425047-2425907 (Clockwise)

Preceding gene: 158423731

Following gene: 158423733

Centisome position: 45.16

GC content: 69.34

Gene sequence:

>861_bases
ATGCCCATGTCGAGCGTCGAACCGCTGAAGGCCCGCCGGCTCTACCTGCTCTTGCGCGACCGCATCCTCAGCGGCGAGGC
GAGCCCGGAGAGCCGTCTGCCGAGCGAGCCGGCGCTGGCCTCCACCTATGGCGTGTCCCGCGTCACCGTGCGCCGCGCGC
TCGATGAACTGGCCCGCGAGGGCCTCATCGAGCGCCGCCCCGGCTCCGGCACCTTCGTCAGCGGCAATGCCGCTTCCGCG
CCCATGGTGGCGGACTTCTCCAACGTGCTCACGCATCTGGTGGAGATGGGCCGGCGCACCGGCGTGAAGCTGCTTTCCTT
CGGCTATCTCGCGCCGACGCCCGCGCTGGCGGAAGAGCTGAAGCTGGAGGCGGGCGAGCGGGTGCAGCGCTCAGTGCGCG
TGCGCCTCATCGACGGCCAGCCCTTCTCCTATCTGGTCACCCACGTTCCCGAGCGCATCGGCATTTCCTATTCGGAGGCG
GATCTGGCCTCCACCCCCCTGCTGGAACTGCTGGAACGCTCCGGCCTTGCCGCCGAGCGGGCGAGCCAGACCATCGGCGC
GGCGCTCGCCGGCCCGGAGGTGGCGCAGGCGCTGGATCTTGAGATCGGCGCGGCGCTGCTGTCCATGACCCGTGTGGTCT
ATGAGCCCTCCGGGCGCGGGATCGAGCACCTGCAGGCGCTCTACCGGCCGGACCGCTATTCCTTCCATCTCGATCTTGTC
CGCACGGGCGATGTGGGCGAGAGGCGCTGGGCGCCGGTCGCCGTTCCGCGCGGTCTCGAAACCAAGGCCGCAGCCAAAGC
ACCGGCCAATCAGAAAAGACGCCCGAAAAGGGCCGATCCTCAGAGGAGAACTGCGAGATGA

Upstream 100 bases:

>100_bases
TCCGGAATGATGCGCAAAGCTCCACCTGGGCGCTTGACAGCAGCCGGGTGGAGCGGTCTCTTAAGACAGAAACCTGTCTT
ATATTAAAGACAGATCAGGG

Downstream 100 bases:

>100_bases
CCATCTGGACGACGCCTCTCGGCCGTCGTGCGGTCCTGAAGGGCAGCACGGCAGCGCTTGCGACCCTCGCCATGCCCGCC
ATCGTGCGCGGTGCTGAGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPMSSVEPLKARRLYLLLRDRILSGEASPESRLPSEPALASTYGVSRVTVRRALDELAREGLIERRPGSGTFVSGNAASA
PMVADFSNVLTHLVEMGRRTGVKLLSFGYLAPTPALAEELKLEAGERVQRSVRVRLIDGQPFSYLVTHVPERIGISYSEA
DLASTPLLELLERSGLAAERASQTIGAALAGPEVAQALDLEIGAALLSMTRVVYEPSGRGIEHLQALYRPDRYSFHLDLV
RTGDVGERRWAPVAVPRGLETKAAAKAPANQKRRPKRADPQRRTAR

Sequences:

>Translated_286_residues
MPMSSVEPLKARRLYLLLRDRILSGEASPESRLPSEPALASTYGVSRVTVRRALDELAREGLIERRPGSGTFVSGNAASA
PMVADFSNVLTHLVEMGRRTGVKLLSFGYLAPTPALAEELKLEAGERVQRSVRVRLIDGQPFSYLVTHVPERIGISYSEA
DLASTPLLELLERSGLAAERASQTIGAALAGPEVAQALDLEIGAALLSMTRVVYEPSGRGIEHLQALYRPDRYSFHLDLV
RTGDVGERRWAPVAVPRGLETKAAAKAPANQKRRPKRADPQRRTAR
>Mature_285_residues
PMSSVEPLKARRLYLLLRDRILSGEASPESRLPSEPALASTYGVSRVTVRRALDELAREGLIERRPGSGTFVSGNAASAP
MVADFSNVLTHLVEMGRRTGVKLLSFGYLAPTPALAEELKLEAGERVQRSVRVRLIDGQPFSYLVTHVPERIGISYSEAD
LASTPLLELLERSGLAAERASQTIGAALAGPEVAQALDLEIGAALLSMTRVVYEPSGRGIEHLQALYRPDRYSFHLDLVR
TGDVGERRWAPVAVPRGLETKAAAKAPANQKRRPKRADPQRRTAR

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790118, Length=210, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1786950, Length=220, Percent_Identity=25.4545454545455, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082252, Length=241, Percent_Identity=22.8215767634855, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 31208; Mature: 31077

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSSVEPLKARRLYLLLRDRILSGEASPESRLPSEPALASTYGVSRVTVRRALDELARE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHC
GLIERRPGSGTFVSGNAASAPMVADFSNVLTHLVEMGRRTGVKLLSFGYLAPTPALAEEL
CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHH
KLEAGERVQRSVRVRLIDGQPFSYLVTHVPERIGISYSEADLASTPLLELLERSGLAAER
HHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCHHHH
ASQTIGAALAGPEVAQALDLEIGAALLSMTRVVYEPSGRGIEHLQALYRPDRYSFHLDLV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEEE
RTGDVGERRWAPVAVPRGLETKAAAKAPANQKRRPKRADPQRRTAR
EECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
PMSSVEPLKARRLYLLLRDRILSGEASPESRLPSEPALASTYGVSRVTVRRALDELARE
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHC
GLIERRPGSGTFVSGNAASAPMVADFSNVLTHLVEMGRRTGVKLLSFGYLAPTPALAEEL
CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHH
KLEAGERVQRSVRVRLIDGQPFSYLVTHVPERIGISYSEADLASTPLLELLERSGLAAER
HHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCHHHH
ASQTIGAALAGPEVAQALDLEIGAALLSMTRVVYEPSGRGIEHLQALYRPDRYSFHLDLV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEEE
RTGDVGERRWAPVAVPRGLETKAAAKAPANQKRRPKRADPQRRTAR
EECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]