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The map label for this gene is lrp [C]

Identifier: 158423691

GI number: 158423691

Start: 2380985

End: 2381458

Strand: Direct

Name: lrp [C]

Synonym: AZC_2067

Alternate gene names: 158423691

Gene position: 2380985-2381458 (Clockwise)

Preceding gene: 158423690

Following gene: 158423697

Centisome position: 44.34

GC content: 62.87

Gene sequence:

>474_bases
ATGCACGAGATTGACGCGATCGACCGGAAGATCATCCGCCAGCTGCGGCTCGATGCCCGCATCTCCAATGTGGATCTCGG
CAAGGTGGTGGGGCTGTCCCCGTCGGCCTGTCACCGCCGCATTGCGCTGATGGAGAAGGCCGGCATCATCACCGGCTATA
CGGCGCTCACCGACATGACAGCCGGCGCCCCGTCCATCGCCGTCATCATCCAGATCACACTGGAGCGGCAGACGGAGGAA
TATCTGAACCGCTTCGAGCTCGCGGTGCGCAAGTTTCCCGAGATCCGCGAATGCCTGCTGATGACCGGCCTCTCGGACTA
TGTGCTGCGGGTGGACGTGGAGAATGCGCTGGAGTTCGAGCGCATTCACAAGGAGATCCTGTCCGTTCTTCCCGGCGTGC
TGCGCATCAATTCCAATTTCGCCATCCGCAACGTGCTCGCCGACCGGCGGGTTGCGGCGCGGCCGGAGGATTAG

Upstream 100 bases:

>100_bases
GCCCGGGGGGCGTTTTCCGCGCGCCGCGGTTTGGCGTAAGAGGCAGGGCCGGCATTGTCCGGCCCTGTCCTGTTCTGACG
ATGCGACACGGCTGAAGCCC

Downstream 100 bases:

>100_bases
CCCCGGCGTTCCAGCGCGAGGCGCAGGCCGAAGGCGACCAGCACGCACCCCGTGAGCCCGTCGAGCACCCGGCGCACGGT
GGGGCTCTGGAGCACGCGGG

Product: transcriptional regulator

Products: NA

Alternate protein names: ORF-1 [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MHEIDAIDRKIIRQLRLDARISNVDLGKVVGLSPSACHRRIALMEKAGIITGYTALTDMTAGAPSIAVIIQITLERQTEE
YLNRFELAVRKFPEIRECLLMTGLSDYVLRVDVENALEFERIHKEILSVLPGVLRINSNFAIRNVLADRRVAARPED

Sequences:

>Translated_157_residues
MHEIDAIDRKIIRQLRLDARISNVDLGKVVGLSPSACHRRIALMEKAGIITGYTALTDMTAGAPSIAVIIQITLERQTEE
YLNRFELAVRKFPEIRECLLMTGLSDYVLRVDVENALEFERIHKEILSVLPGVLRINSNFAIRNVLADRRVAARPED
>Mature_157_residues
MHEIDAIDRKIIRQLRLDARISNVDLGKVVGLSPSACHRRIALMEKAGIITGYTALTDMTAGAPSIAVIIQITLERQTEE
YLNRFELAVRKFPEIRECLLMTGLSDYVLRVDVENALEFERIHKEILSVLPGVLRINSNFAIRNVLADRRVAARPED

Specific function: Not known, symbiotically active [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=131, Percent_Identity=41.9847328244275, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI87081742, Length=142, Percent_Identity=28.169014084507, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17737; Mature: 17737

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEIDAIDRKIIRQLRLDARISNVDLGKVVGLSPSACHRRIALMEKAGIITGYTALTDMT
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCC
AGAPSIAVIIQITLERQTEEYLNRFELAVRKFPEIRECLLMTGLSDYVLRVDVENALEFE
CCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHEEEEEHHHHHHHH
RIHKEILSVLPGVLRINSNFAIRNVLADRRVAARPED
HHHHHHHHHCCHHEEECCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHEIDAIDRKIIRQLRLDARISNVDLGKVVGLSPSACHRRIALMEKAGIITGYTALTDMT
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCC
AGAPSIAVIIQITLERQTEEYLNRFELAVRKFPEIRECLLMTGLSDYVLRVDVENALEFE
CCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHEEEEEHHHHHHHH
RIHKEILSVLPGVLRINSNFAIRNVLADRRVAARPED
HHHHHHHHHCCHHEEECCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8190622; 9163424 [H]