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The map label for this gene is dadA

Identifier: 158423690

GI number: 158423690

Start: 2379625

End: 2380878

Strand: Direct

Name: dadA

Synonym: AZC_2066

Alternate gene names: 158423690

Gene position: 2379625-2380878 (Clockwise)

Preceding gene: 158423689

Following gene: 158423691

Centisome position: 44.32

GC content: 66.59

Gene sequence:

>1254_bases
ATGCGGATCATCGTTCTGGGCGCCGGCGTCATCGGCGTCACCTCCGCCTATTTCCTGGCGAAGGCCGGCCATGAGGTGAC
GGTGCTCGACCGGCAGGCCGGACCGGCGCTGGAAACGAGCTATGCCAATGCCGGCGAGGTGTCGCCGGGCTATTCCTCGC
CTTGGGCAGCGCCGGGCATTCCCATGAAGGCCGCCAAGTGGCTGTTCATGAAGCACGCCCCGCTCATCGTCCGCCCGACG
CTCGATCCGGTGACCTGGCGCTGGATGCTCCAGATGCTCGCCAACTGCACCTCGGCCCGCTATGCGGTGAACAAGGGCCG
CATGGTGCGCATCGCCGAATACAGCCGCGATGTGCTCATGCAACTGCGGGCCGATACGGGCATCCGCTATGACGAGCGCA
TGCAGGGCACGCTGGAAGTGTTCCGCAGCCAGAAGCAGCTCGACGGCATCGCCAAGGACATCGCCGTCCTGAAGGCGGAC
GGCGTGCCGTTCGAGGTTCTGGACCGCGAAGGCTGCGTGCAGGTGGAGCCGGGCCTCAAGCCCGCCGCCCACAAGATCGT
CGGCGGCCTGCGCCTGCCGGGCGACGAGACCGGCGACTGCTTCCTCTTCACCAATGCCTTGGCCAAGCTCGCTGAGGGCC
TGGGCGTGCGCTTCGTCTACAATGTGGACCTGAAGCGCCTGCGCCGGGATGGCGACCGCATCGCGGCCGTCGAGACCGCG
CAGGGCGATTACATCGCAGACAGCTATGTGGCGGCGCTCGGCAGCTACATGCCAGGCTTCCTCGCCCCGCTCGGCCTCGA
CCTGCCCATCTATCCCGTGAAGGGCTATTCCATCACCGTGCCGATCCTCGACGAGGCCAAGGCACCCGTCTCCACCGTGA
TGGACGAATATTACAAGATCGCCATCACCCGCCTCGGCTCGCGCATCCGCGTCGGCGGCATGGCGGAGATCGCCCGCTTC
AACAAGGATCTGCCGCCCGCCCGCCAGGCGACGCTCACCCTCTCGGTGGAAGACCTGTTCGGCGGCGCCGGCGACCAGAA
GAAGGCGGAGTTCTGGTGCGGCCTGCGCCCCATGACGCCGGATGGCACGCCCATCATCGGCAAGACGAAGTTCGGCAACC
TGTTCCTGAACGGTGGCCACGGCACGCTCGGCTGGACCATGTCCTGCGGGTCCGCCCGTCTCCTGTCCGACATCATCTCC
GGTGCCAAACCCGAAATCTCCACCGAAGGGCTGGATCTCTCCCGCTATCGCTGA

Upstream 100 bases:

>100_bases
CGGCACCATCTCCTACGAGATCCTGACCCGCCTCGGCCGTCGCTATCGCCGGGTCTACATCTGACTATTCCAACAAGAAC
AAAATCCTACAGAGGGTGAC

Downstream 100 bases:

>100_bases
GCCGACGCCCGGGGGGCGTTTTCCGCGCGCCGCGGTTTGGCGTAAGAGGCAGGGCCGGCATTGTCCGGCCCTGTCCTGTT
CTGACGATGCGACACGGCTG

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MRIIVLGAGVIGVTSAYFLAKAGHEVTVLDRQAGPALETSYANAGEVSPGYSSPWAAPGIPMKAAKWLFMKHAPLIVRPT
LDPVTWRWMLQMLANCTSARYAVNKGRMVRIAEYSRDVLMQLRADTGIRYDERMQGTLEVFRSQKQLDGIAKDIAVLKAD
GVPFEVLDREGCVQVEPGLKPAAHKIVGGLRLPGDETGDCFLFTNALAKLAEGLGVRFVYNVDLKRLRRDGDRIAAVETA
QGDYIADSYVAALGSYMPGFLAPLGLDLPIYPVKGYSITVPILDEAKAPVSTVMDEYYKIAITRLGSRIRVGGMAEIARF
NKDLPPARQATLTLSVEDLFGGAGDQKKAEFWCGLRPMTPDGTPIIGKTKFGNLFLNGGHGTLGWTMSCGSARLLSDIIS
GAKPEISTEGLDLSRYR

Sequences:

>Translated_417_residues
MRIIVLGAGVIGVTSAYFLAKAGHEVTVLDRQAGPALETSYANAGEVSPGYSSPWAAPGIPMKAAKWLFMKHAPLIVRPT
LDPVTWRWMLQMLANCTSARYAVNKGRMVRIAEYSRDVLMQLRADTGIRYDERMQGTLEVFRSQKQLDGIAKDIAVLKAD
GVPFEVLDREGCVQVEPGLKPAAHKIVGGLRLPGDETGDCFLFTNALAKLAEGLGVRFVYNVDLKRLRRDGDRIAAVETA
QGDYIADSYVAALGSYMPGFLAPLGLDLPIYPVKGYSITVPILDEAKAPVSTVMDEYYKIAITRLGSRIRVGGMAEIARF
NKDLPPARQATLTLSVEDLFGGAGDQKKAEFWCGLRPMTPDGTPIIGKTKFGNLFLNGGHGTLGWTMSCGSARLLSDIIS
GAKPEISTEGLDLSRYR
>Mature_417_residues
MRIIVLGAGVIGVTSAYFLAKAGHEVTVLDRQAGPALETSYANAGEVSPGYSSPWAAPGIPMKAAKWLFMKHAPLIVRPT
LDPVTWRWMLQMLANCTSARYAVNKGRMVRIAEYSRDVLMQLRADTGIRYDERMQGTLEVFRSQKQLDGIAKDIAVLKAD
GVPFEVLDREGCVQVEPGLKPAAHKIVGGLRLPGDETGDCFLFTNALAKLAEGLGVRFVYNVDLKRLRRDGDRIAAVETA
QGDYIADSYVAALGSYMPGFLAPLGLDLPIYPVKGYSITVPILDEAKAPVSTVMDEYYKIAITRLGSRIRVGGMAEIARF
NKDLPPARQATLTLSVEDLFGGAGDQKKAEFWCGLRPMTPDGTPIIGKTKFGNLFLNGGHGTLGWTMSCGSARLLSDIIS
GAKPEISTEGLDLSRYR

Specific function: Oxidative deamination of D-amino acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=416, Percent_Identity=55.2884615384615, Blast_Score=487, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA_AZOC5 (A8I711)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001524982.1
- ProteinModelPortal:   A8I711
- GeneID:   5688154
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_2066
- HOGENOM:   HBG729204
- OMA:   WQMLQNC
- ProtClustDB:   PRK00711
- BioCyc:   ACAU438753:AZC_2066-MONOMER
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 45247; Mature: 45247

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIVLGAGVIGVTSAYFLAKAGHEVTVLDRQAGPALETSYANAGEVSPGYSSPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PMKAAKWLFMKHAPLIVRPTLDPVTWRWMLQMLANCTSARYAVNKGRMVRIAEYSRDVLM
CHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCHHHEEECCCCEEEEHHHHHHHHH
QLRADTGIRYDERMQGTLEVFRSQKQLDGIAKDIAVLKADGVPFEVLDREGCVQVEPGLK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCCEEECCCCC
PAAHKIVGGLRLPGDETGDCFLFTNALAKLAEGLGVRFVYNVDLKRLRRDGDRIAAVETA
HHHHHHHCCEECCCCCCCCEEEHHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEEEEEC
QGDYIADSYVAALGSYMPGFLAPLGLDLPIYPVKGYSITVPILDEAKAPVSTVMDEYYKI
CCCCHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHH
AITRLGSRIRVGGMAEIARFNKDLPPARQATLTLSVEDLFGGAGDQKKAEFWCGLRPMTP
HHHHCCCCEEECCHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHEECCCCCCC
DGTPIIGKTKFGNLFLNGGHGTLGWTMSCGSARLLSDIISGAKPEISTEGLDLSRYR
CCCEEEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIIVLGAGVIGVTSAYFLAKAGHEVTVLDRQAGPALETSYANAGEVSPGYSSPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PMKAAKWLFMKHAPLIVRPTLDPVTWRWMLQMLANCTSARYAVNKGRMVRIAEYSRDVLM
CHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCHHHEEECCCCEEEEHHHHHHHHH
QLRADTGIRYDERMQGTLEVFRSQKQLDGIAKDIAVLKADGVPFEVLDREGCVQVEPGLK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCCEEECCCCC
PAAHKIVGGLRLPGDETGDCFLFTNALAKLAEGLGVRFVYNVDLKRLRRDGDRIAAVETA
HHHHHHHCCEECCCCCCCCEEEHHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEEEEEC
QGDYIADSYVAALGSYMPGFLAPLGLDLPIYPVKGYSITVPILDEAKAPVSTVMDEYYKI
CCCCHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHH
AITRLGSRIRVGGMAEIARFNKDLPPARQATLTLSVEDLFGGAGDQKKAEFWCGLRPMTP
HHHHCCCCEEECCHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHEECCCCCCC
DGTPIIGKTKFGNLFLNGGHGTLGWTMSCGSARLLSDIISGAKPEISTEGLDLSRYR
CCCEEEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA