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The map label for this gene is recO [H]

Identifier: 158423630

GI number: 158423630

Start: 2312121

End: 2312858

Strand: Direct

Name: recO [H]

Synonym: AZC_2006

Alternate gene names: 158423630

Gene position: 2312121-2312858 (Clockwise)

Preceding gene: 158423629

Following gene: 158423631

Centisome position: 43.06

GC content: 69.78

Gene sequence:

>738_bases
GTGGAATGGACCGACGCGGGCATCGTTCTTGGCGTGCGTCGCCACGGGGAAACGAGTGCCATCGTCGATCTGATGACGCG
GGAGCGGGGCCGTCACGCCGGCCTCGTGCGCGGCGGGGGCTCCCGCCGCCTTGCCGCCTTGCTCCAGCCGGGCAATACGC
TGCACGCCACATGGCGGGCCCGCCTCGAAGGCCAGCTCGGCCTCATGACCGTGGAGCCGCTGACGCTGCGCTCCGATGCG
ATCATGCGCAGCGCGCACGGCAGCTTTGGCGTGACCCATCTCGTGGGCCTGATGCGCCTGTTGCCCGAGCGCGATCCGCA
TCCCGGCCTTTTCGCCAGCCTCGACGCCATTCTGGACGCCTTCGACGAGCCCGCCCACGCGGGTGAGCTTCTGGCGCGCT
TCGAGATGGCATTGCTCGTGGAACTGGGGTTCGGTCTCGACCTCACCACCTGCGCGGCCACCGGCGGCAACAATGATCTC
GCCTATGTTTCGCCGCGCAGCGGCCGGGCTGTTTCCCGCAGCGCAGGCGAGCCCTATGCGGACAAGCTGTTCGGCCTGCC
CACCTTCCTCATCGGCGGCATCGTGCCGCCGAGCCTGCCGGACATGGAGGAAGCCCTGCGCATGACGGGCTTCTTCCTCT
CGACACGTGTTCTGGAGCCGCGCGGCCTCGCGCTGGGCGAGGCGCGCGCCTCATTTCTAGCGGCACTGCGCCGCGCGCTT
CACCAGCCCCGGCCGTAG

Upstream 100 bases:

>100_bases
CATCTCTTCCTGTTCGTGAAGGTGCGCGAGAACTGGGCCGATGATCCGGAGCGCTATCGCGAGATGGGGCTCGAATTCCC
GCACGGAGACTGACACCGCC

Downstream 100 bases:

>100_bases
CCATAGCCCCAGGCGGGCGGGGGAGGCGGGGGCGGGGCACCGTAGAAGCCGGGACGGGGGCCATAGCCGCCACCGCCCCA
ACCGCCGCCGCCCCAGCCGC

Product: recombination protein O

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MEWTDAGIVLGVRRHGETSAIVDLMTRERGRHAGLVRGGGSRRLAALLQPGNTLHATWRARLEGQLGLMTVEPLTLRSDA
IMRSAHGSFGVTHLVGLMRLLPERDPHPGLFASLDAILDAFDEPAHAGELLARFEMALLVELGFGLDLTTCAATGGNNDL
AYVSPRSGRAVSRSAGEPYADKLFGLPTFLIGGIVPPSLPDMEEALRMTGFFLSTRVLEPRGLALGEARASFLAALRRAL
HQPRP

Sequences:

>Translated_245_residues
MEWTDAGIVLGVRRHGETSAIVDLMTRERGRHAGLVRGGGSRRLAALLQPGNTLHATWRARLEGQLGLMTVEPLTLRSDA
IMRSAHGSFGVTHLVGLMRLLPERDPHPGLFASLDAILDAFDEPAHAGELLARFEMALLVELGFGLDLTTCAATGGNNDL
AYVSPRSGRAVSRSAGEPYADKLFGLPTFLIGGIVPPSLPDMEEALRMTGFFLSTRVLEPRGLALGEARASFLAALRRAL
HQPRP
>Mature_245_residues
MEWTDAGIVLGVRRHGETSAIVDLMTRERGRHAGLVRGGGSRRLAALLQPGNTLHATWRARLEGQLGLMTVEPLTLRSDA
IMRSAHGSFGVTHLVGLMRLLPERDPHPGLFASLDAILDAFDEPAHAGELLARFEMALLVELGFGLDLTTCAATGGNNDL
AYVSPRSGRAVSRSAGEPYADKLFGLPTFLIGGIVPPSLPDMEEALRMTGFFLSTRVLEPRGLALGEARASFLAALRRAL
HQPRP

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26346; Mature: 26346

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWTDAGIVLGVRRHGETSAIVDLMTRERGRHAGLVRGGGSRRLAALLQPGNTLHATWRA
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHEEECCCCEEEHHHHE
RLEGQLGLMTVEPLTLRSDAIMRSAHGSFGVTHLVGLMRLLPERDPHPGLFASLDAILDA
EECCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
FDEPAHAGELLARFEMALLVELGFGLDLTTCAATGGNNDLAYVSPRSGRAVSRSAGEPYA
HCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHH
DKLFGLPTFLIGGIVPPSLPDMEEALRMTGFFLSTRVLEPRGLALGEARASFLAALRRAL
HHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH
HQPRP
CCCCC
>Mature Secondary Structure
MEWTDAGIVLGVRRHGETSAIVDLMTRERGRHAGLVRGGGSRRLAALLQPGNTLHATWRA
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHEEECCCCEEEHHHHE
RLEGQLGLMTVEPLTLRSDAIMRSAHGSFGVTHLVGLMRLLPERDPHPGLFASLDAILDA
EECCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
FDEPAHAGELLARFEMALLVELGFGLDLTTCAATGGNNDLAYVSPRSGRAVSRSAGEPYA
HCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHH
DKLFGLPTFLIGGIVPPSLPDMEEALRMTGFFLSTRVLEPRGLALGEARASFLAALRRAL
HHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH
HQPRP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA