Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is ycjY [C]

Identifier: 158423505

GI number: 158423505

Start: 2155061

End: 2155972

Strand: Direct

Name: ycjY [C]

Synonym: AZC_1881

Alternate gene names: 158423505

Gene position: 2155061-2155972 (Clockwise)

Preceding gene: 158423504

Following gene: 158423506

Centisome position: 40.13

GC content: 67.11

Gene sequence:

>912_bases
TTGATCGAGGCCCGGGACAGGACCATGCAAGAGAAACTCACCTTCATGTCGGACGGCCTCAAGCTGTCCGCGGTGCTTCA
CGTGCCCGAAGGCCGCCGGCCCGACGAGCGCCTGCCGGCTTTCATCGTCCTGCACGGCTTCGTCGGCTCGAAGGACGAAT
CCCACGCCGAGATTCAGGCCCGGATGCTGGAAGATTTCGGCTATGTGGCGCTGCGCTTCGATTTCCGCTGCTGCGGCGAG
AGCGAAGGCGAGCGGGCGCAGGTGCGCTGTTTCGATCAGGTGGCGGACGCCAAGAATGCGCTGACCTTCCTGGCGGGACG
CCCGGAAGTGGACCCGGCCCGCATCGGCGTGGTCGGCCATTCCTTCGGCGCGGCGGTCGCGGTCTATTCGGCGGGCGTGG
ATAGCCGCTTTGCCTGCGTCATCTCCTCCTGCGGCTGGGGCGACGGGGAACGCAAGTTCCGCGGCCAGCACCCGACGCCG
GAAGCCTGGGCGCGCTTCACCGGGCTGCTGGAGGCTGGCCGCAAGCACAAGCGCGAGACCGGGCAGAGCATGTGGATCTC
CCGCTTCGACGCGGTGCCGATCCCCGAGCCGCTGCGCCGCAATCTCTCGCCCAAGGCCATCATGGAGATCCCGGTCGAGA
CCGCGATCAGCATGTATGAGTTCCGGGCTGATGACGTGGTGGGCAACATCGCCCCACGTCCGGCGCTGTTCTTCCACACG
GCGGACGACGGCATCACCCCCACCGAGCAGTCCATCCGGATGTTCGAGAAGGCCGGCCAGCCGGCGGAACTGATGCTCAT
CACCGGAACGTCGCACTTCCCGCTGTCGGAGCAGGATGCGCCGCGCACCAAGCTGATGATCAGGGGCTGGCTGGACAAGT
TCTTCCCTTCGCCGCTCGGGGGGGCGGCATGA

Upstream 100 bases:

>100_bases
CCAATCTCCAGCGCCCCGGAAATGTACGGCAAATGAACGTGTGGGGCACACCCGCGCCGCTGGAGTGGCGCACTCATCAC
TTCCCCTTCGCCGCCATCGG

Downstream 100 bases:

>100_bases
GCGGCACGCCGCTCACCCTCGCGCCGGAGGCGCTCTCGGCCTTTGCGGCGGGCCTGCTGGAGGCGGGCGGGTTCCGCCCC
GCCGATGCGAAGAAATCCGC

Product: dienelactone hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQARMLEDFGYVALRFDFRCCGE
SEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGHSFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTP
EAWARFTGLLEAGRKHKRETGQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT
ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLGGAA

Sequences:

>Translated_303_residues
MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQARMLEDFGYVALRFDFRCCGE
SEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGHSFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTP
EAWARFTGLLEAGRKHKRETGQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT
ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLGGAA
>Mature_303_residues
MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQARMLEDFGYVALRFDFRCCGE
SEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGHSFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTP
EAWARFTGLLEAGRKHKRETGQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT
ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLGGAA

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 33569; Mature: 33569

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQA
CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCCCCCHHHHHHH
RMLEDFGYVALRFDFRCCGESEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGH
HHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHEEEEEC
SFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTPEAWARFTGLLEAGRKHKRET
CHHHHHHHEECCCCCCEEEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT
CHHHHHHHCCCCCCCHHHHHCCCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLG
CCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
GAA
CCC
>Mature Secondary Structure
MIEARDRTMQEKLTFMSDGLKLSAVLHVPEGRRPDERLPAFIVLHGFVGSKDESHAEIQA
CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCCCCCHHHHHHH
RMLEDFGYVALRFDFRCCGESEGERAQVRCFDQVADAKNALTFLAGRPEVDPARIGVVGH
HHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHEEEEEC
SFGAAVAVYSAGVDSRFACVISSCGWGDGERKFRGQHPTPEAWARFTGLLEAGRKHKRET
CHHHHHHHEECCCCCCEEEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GQSMWISRFDAVPIPEPLRRNLSPKAIMEIPVETAISMYEFRADDVVGNIAPRPALFFHT
CHHHHHHHCCCCCCCHHHHHCCCCHHEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
ADDGITPTEQSIRMFEKAGQPAELMLITGTSHFPLSEQDAPRTKLMIRGWLDKFFPSPLG
CCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
GAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916281 [H]