Definition | Azorhizobium caulinodans ORS 571, complete genome. |
---|---|
Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is ureAB [H]
Identifier: 158423388
GI number: 158423388
Start: 2016248
End: 2016868
Strand: Direct
Name: ureAB [H]
Synonym: AZC_1764
Alternate gene names: 158423388
Gene position: 2016248-2016868 (Clockwise)
Preceding gene: 158423387
Following gene: 158423389
Centisome position: 37.55
GC content: 67.31
Gene sequence:
>621_bases GTGCTGCTGACGCCGCGGGAGAAGGACAAGCTCTTTATCGCCATGGCCGCCGAAGTGGCGCGCAAGCGCCTCGCGCGCGG CGTGAAGCTCAACCATCCGGAGGCGGTGGCGCTCATCACCGATTTCGTGGTGGAAGGCGCCCGCGACGGTCGCACCGTCG CGGAGCTGATGGAGGCGGGTGCCCGCGTCATCACCGCAGATCAGGTGATGGAGGGCATCGCCGAGATGATCCATGACATC CAGGTGGAGGCGACCTTCCCGGATGGGACGAAGCTGGTCACGGTGCACAACCCCATTCGCGGACAGGCGTCCGAGGACGT GCCCGGCGAATTTGTGACGCCGGACGGCGAGATCGTCTTCAATGAGGGCGCCGAGCGGGTGACGCTCTCGGTGGCCAATA CGGGCGACCGCCCCATCCAAGTGGGCAGCCACTACCATTTCTATGAGACCAATCCGGGCCTTGCCTTCGAGCGCGAGAAG GCGCGCGGGATGCGCCTCGACATCGCGCCCGGCACGGCCGTGCGCTTCGAGCCCGGCGCCACCCGCGAGGTCACGCTGGT GCCGCTGGGCGGCAAGCGTGAGGTCTATGGGTTCCGTGGCGACGTGATGGGCAAGCTCTGA
Upstream 100 bases:
>100_bases GCGCCCGATATCGAAACCCTGCGACGGGACGCCGTCGCATTCCTGAATGCCTTTCGGGGGGCGCCGCTGCCCCGCGTCTG GGCCCTGTGAGGAGACTGCC
Downstream 100 bases:
>100_bases TGGCACTCCAGCATTATTCCGGCAGCTGCCAGTGCGGCGCGGTGGCCTTCGAGGCCGATCTTGATCTGGACCGCACGGCC ACCTGCAACTGCTCCCGCTG
Product: urease subunit beta
Products: NA
Alternate protein names: Urea amidohydrolase subunit gamma/beta [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLLTPREKDKLFIAMAAEVARKRLARGVKLNHPEAVALITDFVVEGARDGRTVAELMEAGARVITADQVMEGIAEMIHDI QVEATFPDGTKLVTVHNPIRGQASEDVPGEFVTPDGEIVFNEGAERVTLSVANTGDRPIQVGSHYHFYETNPGLAFEREK ARGMRLDIAPGTAVRFEPGATREVTLVPLGGKREVYGFRGDVMGKL
Sequences:
>Translated_206_residues MLLTPREKDKLFIAMAAEVARKRLARGVKLNHPEAVALITDFVVEGARDGRTVAELMEAGARVITADQVMEGIAEMIHDI QVEATFPDGTKLVTVHNPIRGQASEDVPGEFVTPDGEIVFNEGAERVTLSVANTGDRPIQVGSHYHFYETNPGLAFEREK ARGMRLDIAPGTAVRFEPGATREVTLVPLGGKREVYGFRGDVMGKL >Mature_206_residues MLLTPREKDKLFIAMAAEVARKRLARGVKLNHPEAVALITDFVVEGARDGRTVAELMEAGARVITADQVMEGIAEMIHDI QVEATFPDGTKLVTVHNPIRGQASEDVPGEFVTPDGEIVFNEGAERVTLSVANTGDRPIQVGSHYHFYETNPGLAFEREK ARGMRLDIAPGTAVRFEPGATREVTLVPLGGKREVYGFRGDVMGKL
Specific function: Unknown
COG id: COG0831
COG function: function code E; Urea amidohydrolase (urease) gamma subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the urease beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002026 - InterPro: IPR002019 - InterPro: IPR012010 - InterPro: IPR008223 - ProDom: PD002319 [H]
Pfam domain/function: PF00699 Urease_beta; PF00547 Urease_gamma [H]
EC number: =3.5.1.5 [H]
Molecular weight: Translated: 22452; Mature: 22452
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTPREKDKLFIAMAAEVARKRLARGVKLNHPEAVALITDFVVEGARDGRTVAELMEAG CCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCC ARVITADQVMEGIAEMIHDIQVEATFPDGTKLVTVHNPIRGQASEDVPGEFVTPDGEIVF CEEEEHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCEEE NEGAERVTLSVANTGDRPIQVGSHYHFYETNPGLAFEREKARGMRLDIAPGTAVRFEPGA CCCCCEEEEEEECCCCCCEEECCEEEEEECCCCCEEEHHHCCCCEEEECCCCEEEECCCC TREVTLVPLGGKREVYGFRGDVMGKL CCEEEEEEECCCEEEEEECCCCCCCC >Mature Secondary Structure MLLTPREKDKLFIAMAAEVARKRLARGVKLNHPEAVALITDFVVEGARDGRTVAELMEAG CCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCC ARVITADQVMEGIAEMIHDIQVEATFPDGTKLVTVHNPIRGQASEDVPGEFVTPDGEIVF CEEEEHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCEEE NEGAERVTLSVANTGDRPIQVGSHYHFYETNPGLAFEREKARGMRLDIAPGTAVRFEPGA CCCCCEEEEEEECCCCCCEEECCEEEEEECCCCCEEEHHHCCCCEEEECCCCEEEECCCC TREVTLVPLGGKREVYGFRGDVMGKL CCEEEEEEECCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]