Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is 158423389
Identifier: 158423389
GI number: 158423389
Start: 2016868
End: 2017224
Strand: Direct
Name: 158423389
Synonym: AZC_1765
Alternate gene names: NA
Gene position: 2016868-2017224 (Clockwise)
Preceding gene: 158423388
Following gene: 158423390
Centisome position: 37.56
GC content: 63.87
Gene sequence:
>357_bases ATGGCACTCCAGCATTATTCCGGCAGCTGCCAGTGCGGCGCGGTGGCCTTCGAGGCCGATCTTGATCTGGACCGCACGGC CACCTGCAACTGCTCCCGCTGCCGGCGCGTGGGCGGCATCCTCTCCTTTGCTTCGCCGGAAGGTTTCAGGCTGAATCAGG GCGAGGAAAAACTGACTGAATATCGCTTCAATACCGGGCGGATCAGCCATTTCTTCTGTGCCACCTGCGGCATCGAGCCC TTCGGCCGTGGCCTTGCGCCGACCGGTGAGTTCAAGGTGGCGGTGAACGTGCGCTGCCTCGACGGCGTGGACCTGAAAGC GCTGACCCCCCGCGAATTCGACGGCGCGAGCCTCTGA
Upstream 100 bases:
>100_bases TGCGCTTCGAGCCCGGCGCCACCCGCGAGGTCACGCTGGTGCCGCTGGGCGGCAAGCGTGAGGTCTATGGGTTCCGTGGC GACGTGATGGGCAAGCTCTG
Downstream 100 bases:
>100_bases AGGATACGCCATGACCAAGGCCCGTATGTCCCGTTCTGCTTATGCGCACATGTTCGGCCCCACGGTGGGCGACAAGGTGC GCCTCGCCGACACCGCGCTC
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MALQHYSGSCQCGAVAFEADLDLDRTATCNCSRCRRVGGILSFASPEGFRLNQGEEKLTEYRFNTGRISHFFCATCGIEP FGRGLAPTGEFKVAVNVRCLDGVDLKALTPREFDGASL
Sequences:
>Translated_118_residues MALQHYSGSCQCGAVAFEADLDLDRTATCNCSRCRRVGGILSFASPEGFRLNQGEEKLTEYRFNTGRISHFFCATCGIEP FGRGLAPTGEFKVAVNVRCLDGVDLKALTPREFDGASL >Mature_117_residues ALQHYSGSCQCGAVAFEADLDLDRTATCNCSRCRRVGGILSFASPEGFRLNQGEEKLTEYRFNTGRISHFFCATCGIEPF GRGLAPTGEFKVAVNVRCLDGVDLKALTPREFDGASL
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=118, Percent_Identity=34.7457627118644, Blast_Score=69, Evalue=9e-13, Organism=Caenorhabditis elegans, GI25149380, Length=115, Percent_Identity=38.2608695652174, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12819; Mature: 12687
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQHYSGSCQCGAVAFEADLDLDRTATCNCSRCRRVGGILSFASPEGFRLNQGEEKLTE CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCEEEECCCCCEEECCCHHHHHH YRFNTGRISHFFCATCGIEPFGRGLAPTGEFKVAVNVRCLDGVDLKALTPREFDGASL CCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCC >Mature Secondary Structure ALQHYSGSCQCGAVAFEADLDLDRTATCNCSRCRRVGGILSFASPEGFRLNQGEEKLTE CCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCEEEECCCCCEEECCCHHHHHH YRFNTGRISHFFCATCGIEPFGRGLAPTGEFKVAVNVRCLDGVDLKALTPREFDGASL CCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA