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The map label for this gene is ureD

Identifier: 158423387

GI number: 158423387

Start: 2015422

End: 2016237

Strand: Direct

Name: ureD

Synonym: AZC_1763

Alternate gene names: 158423387

Gene position: 2015422-2016237 (Clockwise)

Preceding gene: 158423386

Following gene: 158423388

Centisome position: 37.53

GC content: 71.45

Gene sequence:

>816_bases
GTGGCCGGTGCCCCGCGCCGGCAGCGGGCGGTGGGGCGCGTGCGCCTCGGCGTCAACGCCATCGCCGGCAAAAGCCGCGT
CAGCGATGTGGCGGAAGCCGGCTCCCTGCGGGTGCGGATGCCGCGCGTCGACGGCCCGGCGGTGGAAGGCGTGCTCGTCA
ACACGGCGGGGGGCGTTGCCTGCGGCGATCATTTCACCATCGAGGTGAAGGCCGAGGCGGGTGCCCACGCGGTTGTCGCG
ACCCCCGCCGCCGAAAAGATCTATCGGTCCGACGGCGAGACCGCCCGCATCGACGTGGCGATCACGGTGGAAGCTGGCGC
GCAGGTGGACTGGCTGCCGCAGGAAACCCTGCTCTATGACGCCGCACGCCTCGCCCGCCGTTTCACCGTGGATCTCGCAC
CCGACGCCACCTTTCTCGCCTTCGAGGCGATCGCCTTCGGCCGCGTGGCGCGGGGCGAGGAGATGCGCACCGGGCATCTG
GAGGACCACTGGCAGGTCACCCGCGGCGGCGGCCTCATCTATGCCGATGCGGTGCGCGTGTCCGGCCCCTTGGGCGAGCT
GCTGCGCCGCCCCACGGTTGCGGCTGGCAACCGGGCGTGGGCGACTTTGCTTTATGTGGCACCCGATGCCGAAGCGCGAC
TGGACGAAGCGCGTGCGCTCATGGAATCTGCGCGCAGTGAATGCGGTGCCAGCGCGTGGAACGGCCTTCTGGCCGCCCGC
TGGCTGGCGCCCGATATCGAAACCCTGCGACGGGACGCCGTCGCATTCCTGAATGCCTTTCGGGGGGCGCCGCTGCCCCG
CGTCTGGGCCCTGTGA

Upstream 100 bases:

>100_bases
ATCCTGATGGAGCGCGGCGAAGTGGTGGCGCGCGGCGACAGGAGCGGGCTTGATGGGGACGACGTCCGCCGCCTCATGGC
CATCTGAGGCGGCAGCAGGA

Downstream 100 bases:

>100_bases
GGAGACTGCCGTGCTGCTGACGCCGCGGGAGAAGGACAAGCTCTTTATCGCCATGGCCGCCGAAGTGGCGCGCAAGCGCC
TCGCGCGCGGCGTGAAGCTC

Product: urease accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MAGAPRRQRAVGRVRLGVNAIAGKSRVSDVAEAGSLRVRMPRVDGPAVEGVLVNTAGGVACGDHFTIEVKAEAGAHAVVA
TPAAEKIYRSDGETARIDVAITVEAGAQVDWLPQETLLYDAARLARRFTVDLAPDATFLAFEAIAFGRVARGEEMRTGHL
EDHWQVTRGGGLIYADAVRVSGPLGELLRRPTVAAGNRAWATLLYVAPDAEARLDEARALMESARSECGASAWNGLLAAR
WLAPDIETLRRDAVAFLNAFRGAPLPRVWAL

Sequences:

>Translated_271_residues
MAGAPRRQRAVGRVRLGVNAIAGKSRVSDVAEAGSLRVRMPRVDGPAVEGVLVNTAGGVACGDHFTIEVKAEAGAHAVVA
TPAAEKIYRSDGETARIDVAITVEAGAQVDWLPQETLLYDAARLARRFTVDLAPDATFLAFEAIAFGRVARGEEMRTGHL
EDHWQVTRGGGLIYADAVRVSGPLGELLRRPTVAAGNRAWATLLYVAPDAEARLDEARALMESARSECGASAWNGLLAAR
WLAPDIETLRRDAVAFLNAFRGAPLPRVWAL
>Mature_270_residues
AGAPRRQRAVGRVRLGVNAIAGKSRVSDVAEAGSLRVRMPRVDGPAVEGVLVNTAGGVACGDHFTIEVKAEAGAHAVVAT
PAAEKIYRSDGETARIDVAITVEAGAQVDWLPQETLLYDAARLARRFTVDLAPDATFLAFEAIAFGRVARGEEMRTGHLE
DHWQVTRGGGLIYADAVRVSGPLGELLRRPTVAAGNRAWATLLYVAPDAEARLDEARALMESARSECGASAWNGLLAARW
LAPDIETLRRDAVAFLNAFRGAPLPRVWAL

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_AZOC5 (A8I4R6)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001524679.1
- GeneID:   5688492
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_1763
- HOGENOM:   HBG711156
- OMA:   QETILFD
- ProtClustDB:   CLSK980186
- BioCyc:   ACAU438753:AZC_1763-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 28912; Mature: 28781

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAPRRQRAVGRVRLGVNAIAGKSRVSDVAEAGSLRVRMPRVDGPAVEGVLVNTAGGVA
CCCCCHHHHHHHHHEECHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEE
CGDHFTIEVKAEAGAHAVVATPAAEKIYRSDGETARIDVAITVEAGAQVDWLPQETLLYD
ECCEEEEEEEECCCCEEEEECCHHHHHHHCCCCEEEEEEEEEEECCCEEECCCHHHHHHH
AARLARRFTVDLAPDATFLAFEAIAFGRVARGEEMRTGHLEDHWQVTRGGGLIYADAVRV
HHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEEEC
SGPLGELLRRPTVAAGNRAWATLLYVAPDAEARLDEARALMESARSECGASAWNGLLAAR
CCCHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
WLAPDIETLRRDAVAFLNAFRGAPLPRVWAL
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AGAPRRQRAVGRVRLGVNAIAGKSRVSDVAEAGSLRVRMPRVDGPAVEGVLVNTAGGVA
CCCCHHHHHHHHHEECHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEE
CGDHFTIEVKAEAGAHAVVATPAAEKIYRSDGETARIDVAITVEAGAQVDWLPQETLLYD
ECCEEEEEEEECCCCEEEEECCHHHHHHHCCCCEEEEEEEEEEECCCEEECCCHHHHHHH
AARLARRFTVDLAPDATFLAFEAIAFGRVARGEEMRTGHLEDHWQVTRGGGLIYADAVRV
HHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEEEC
SGPLGELLRRPTVAAGNRAWATLLYVAPDAEARLDEARALMESARSECGASAWNGLLAAR
CCCHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
WLAPDIETLRRDAVAFLNAFRGAPLPRVWAL
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA