Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is yegS [C]

Identifier: 158423086

GI number: 158423086

Start: 1662336

End: 1663277

Strand: Reverse

Name: yegS [C]

Synonym: AZC_1462

Alternate gene names: 158423086

Gene position: 1663277-1662336 (Counterclockwise)

Preceding gene: 158423090

Following gene: 158423084

Centisome position: 30.97

GC content: 70.91

Gene sequence:

>942_bases
ATGGGCCGCACGCTGGTTGTGTTGAACGCGAAGGCCGGGACCCTCATGGATCTCGGGCCGAAGACCACCGCCGAGGCCGT
GGACAAGGCACTCACCCGGCCCGGCCGGGACGTCACCGTGGTGCTGGCGGAGGGCAAGCAGATCCCGGGCGCCGTCCGCT
CGGCGATCGAGGGCGGATACGACACGCTGATCGTCGGGGCCGGTGATGGCACGGTGAGCTACGCCGCATCGGTGCTGGCC
GGCAGCGACGTCGCGCTCGGCGTGCTGCCGCTCGGCACCATGAACCTGCTCGCCTACGACATCGGCCTGCCGCGTGACCT
GCCCGGCGCGGTCGCGGCACTCGCCACCGCCCGGCCCATGCGCGTGGACCTGACGACGCTCAACGGTCGCGCCTTCCATG
GCGTCTCTGGGGTCGGCTTCTTCTCCCAGATGGCGCTCGCCCGCGAGCAGGTGCGCGAGCAGCGCGGCCGCATCTTCGGC
TGGCTGTGGGCGCTGTGGCGTGCGGTATTCCGTTCCGGCCGCCTGTCGCTGGAGATTGAGATCGACGGCCGGCGCGAGCC
CATTGATGCCTATGCCGCTCTCGTCACCAACAATGCCTTCGATGCGCCCGGCTGGCATCGCTCGCGCCTCGACACCGGGC
TGCTGGAAATCCACGTGGCCGAGGAGCGCGGCGCCCTGGCGCGGTTGAAGGCGGGTGCCGACCTCATCGTGGAGAACTGG
CGCAACAATCCCGGCATCCGCTCCTTCCAGGCGCACACCGTGACCATTCACGGGCTGAAGCGGCGGCGCGCCTGGGTGGC
GACCGACGGCGAAGTGACGCGGGAAACGCTGCCGTTGCGCTATGAGGTGCGGCCGAAGGCGCTGACGCTGCTCATTCCGG
AGGCCGCGATCCAGTGGGCGGAACGCCCCGACGGCGCTGCCAGCCCGGCGGCGGTGGCCTGA

Upstream 100 bases:

>100_bases
TTTCGCCGCTCAAGGCTGATCACTGGGAACATGACGTAAGGGCGCCGCCCGCCGGAACCGGAGTGGGCAGGCGGAGGTTC
TCCGCGCTGGGAGACGAGAC

Downstream 100 bases:

>100_bases
CGCCGCCGCGCCTCTTCCCAGGGTGATTCCGGCCCCTTCCGGGGCCGGCAGGCCCTCAGCGGGGCTCGATCTCATAGACG
ATGGACACCTGCGCCCGCAC

Product: sphingosine kinase and enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MGRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGYDTLIVGAGDGTVSYAASVLA
GSDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPMRVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFG
WLWALWRAVFRSGRLSLEIEIDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENW
RNNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWAERPDGAASPAAVA

Sequences:

>Translated_313_residues
MGRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGYDTLIVGAGDGTVSYAASVLA
GSDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPMRVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFG
WLWALWRAVFRSGRLSLEIEIDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENW
RNNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWAERPDGAASPAAVA
>Mature_312_residues
GRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGYDTLIVGAGDGTVSYAASVLAG
SDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPMRVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFGW
LWALWRAVFRSGRLSLEIEIDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENWR
NNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWAERPDGAASPAAVA

Specific function: Unknown

COG id: COG1597

COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DAGKc domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001206
- InterPro:   IPR004363
- InterPro:   IPR018148
- InterPro:   IPR011607 [H]

Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]

EC number: NA

Molecular weight: Translated: 33578; Mature: 33447

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGY
CCCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCC
DTLIVGAGDGTVSYAASVLAGSDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPM
EEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHEECCCCCCCCHHHHHHHCCCCE
RVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFGWLWALWRAVFRSGRLSLEIE
EEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEE
IDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENW
ECCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEECCCCCEEEHHCCCCEEEECC
RNNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWA
CCCCCCCEEEEEEEEEEECCCCCEEEECCCCHHHHCCCEEEEECCCEEEEEECHHHHHHH
ERPDGAASPAAVA
CCCCCCCCCCCCC
>Mature Secondary Structure 
GRTLVVLNAKAGTLMDLGPKTTAEAVDKALTRPGRDVTVVLAEGKQIPGAVRSAIEGGY
CCEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCC
DTLIVGAGDGTVSYAASVLAGSDVALGVLPLGTMNLLAYDIGLPRDLPGAVAALATARPM
EEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHEECCCCCCCCHHHHHHHCCCCE
RVDLTTLNGRAFHGVSGVGFFSQMALAREQVREQRGRIFGWLWALWRAVFRSGRLSLEIE
EEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEE
IDGRREPIDAYAALVTNNAFDAPGWHRSRLDTGLLEIHVAEERGALARLKAGADLIVENW
ECCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEECCCCCEEEHHCCCCEEEECC
RNNPGIRSFQAHTVTIHGLKRRRAWVATDGEVTRETLPLRYEVRPKALTLLIPEAAIQWA
CCCCCCCEEEEEEEEEEECCCCCEEEECCCCHHHHCCCEEEEECCCEEEEEECHHHHHHH
ERPDGAASPAAVA
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]