Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318132

Identifier: 158318132

GI number: 158318132

Start: 7764170

End: 7765315

Strand: Reverse

Name: 158318132

Synonym: Franean1_6396

Alternate gene names: NA

Gene position: 7765315-7764170 (Counterclockwise)

Preceding gene: 158318133

Following gene: 158318131

Centisome position: 86.45

GC content: 69.02

Gene sequence:

>1146_bases
GTGGGAGCGCATCACGAACTGCTCGACGCCGCACGCGCCGAGACCGGACTTACCGACTTCGGTGAGGACACGTTCCTGGA
GGGCCTGGAGGTGCTCGTCCGCGCTCTCCAGCAGGAGGCCGCGCTGAACAGCACCGGCCAGGCGGCGTTACGCAAAATGA
TCGTCGGCCTGTTGAGCCAGCGGCTGCAGATCGAGGACTGGTACCGGCGCCAGCCCGAGATCGACGACGAGCGGATCACC
GCGCCGCTGATCGGGCTCGGCCTGCCGCGCACCGGGTCGACGGCGCTGTCGTTCCTGCTGGCCGAGGACCCGAACGCCCG
GTCGCTGCGGATGTGGGAGGCGACGGCGCCCTGCCCGCCGCCGTCCACGGTCCACGGTGACGACAAGAGGATCGAGGACG
GCCGGGCCGACGTGGCGGAACGGAAGCGGACCTCGCCGCGCCGGCTCGCGCTCGTCCCGGCCAGCGCGACCGGCCCGACG
GAGTGCCAGAGCCTGATGGCGCTCGACTTCCGGGCGCACTTCTTCCAGGCGTTCGCCTACGTACCGTCCTATTCGAAGTG
GCTTCTCAATTCCGATCTCACCTCGACCTACCGGTACGAGCTGCGTGCGCTGAAACTGTTGCAGTGGGGCTTCGAGGCCC
AGCCGTGGCGGCTGAAGTGCCCGACCCACCTGCTCTTCCTGGACGATCTCGACAAGGTGTTCCCGGACGCCCGGTTCGTG
ATGACGCACCGCGATCCCGCCGAGGTCATGGTGTCGGTGGCCGACCTCTACGCCGCGGTGGCCCGTTCGTACTGCGACGA
CATCGACGAGCGCTATCTCGGCCAGCTCAACATCGAGCACTGGTCGGTCGGCATGGAGCGGGCGCTGGCGTTCCGCCAGA
AGGCCGGCGACGACCGGTTCTACGACATCGACTTCCGGGCGATGCAGCGTGATCCGCTCGGCGAGATCCGCGGGCTCTAC
GCCTGGCTCGGCGAGTCCGTCACCCCGGAGTTCGAGGCCGGAATGCAGGGATGGTGGCGGGAGAACGCGGAGAAGCGCGA
GCGCAACGTCCACCCGGACCCGTCGACGTTCGGTATCGACGTCGACCGGATCCGCCCGCTGTTCGCCGACTACACCGCGC
GTGCGGCGGCCTGGACCGCGCACTAG

Upstream 100 bases:

>100_bases
ATCCCCAGTCGCCCAGTCGCCCAATCGCATAGCCGCCTGGGCCCATAGTCACCCGCGACGTACGCCGCGGGTGGCGGCCC
ACGTCCGAAGGGGAGAAACC

Downstream 100 bases:

>100_bases
CTCGACCGCTCATCGAAAGGAAAGCAGTGCAGGACGAGAGCGTCTACTACGACCCGTACGACTTCGAGATCGACGCGAAC
CCCTACCCGGTGTGGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MGAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQRLQIEDWYRRQPEIDDERIT
APLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPPPSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPT
ECQSLMALDFRAHFFQAFAYVPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFV
MTHRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRFYDIDFRAMQRDPLGEIRGLY
AWLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGIDVDRIRPLFADYTARAAAWTAH

Sequences:

>Translated_381_residues
MGAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQRLQIEDWYRRQPEIDDERIT
APLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPPPSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPT
ECQSLMALDFRAHFFQAFAYVPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFV
MTHRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRFYDIDFRAMQRDPLGEIRGLY
AWLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGIDVDRIRPLFADYTARAAAWTAH
>Mature_380_residues
GAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQRLQIEDWYRRQPEIDDERITA
PLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPPPSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPTE
CQSLMALDFRAHFFQAFAYVPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFVM
THRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRFYDIDFRAMQRDPLGEIRGLYA
WLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGIDVDRIRPLFADYTARAAAWTAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43305; Mature: 43174

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQ
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RLQIEDWYRRQPEIDDERITAPLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPP
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCC
PSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPTECQSLMALDFRAHFFQAFAY
CCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFV
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEHHHHHHHCCCCEEE
MTHRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRF
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE
YDIDFRAMQRDPLGEIRGLYAWLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGID
EECCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCC
VDRIRPLFADYTARAAAWTAH
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQ
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RLQIEDWYRRQPEIDDERITAPLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPP
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCC
PSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPTECQSLMALDFRAHFFQAFAY
CCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFV
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEHHHHHHHCCCCEEE
MTHRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRF
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE
YDIDFRAMQRDPLGEIRGLYAWLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGID
EECCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCC
VDRIRPLFADYTARAAAWTAH
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA