Definition | Frankia sp. EAN1pec chromosome, complete genome. |
---|---|
Accession | NC_009921 |
Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318132
Identifier: 158318132
GI number: 158318132
Start: 7764170
End: 7765315
Strand: Reverse
Name: 158318132
Synonym: Franean1_6396
Alternate gene names: NA
Gene position: 7765315-7764170 (Counterclockwise)
Preceding gene: 158318133
Following gene: 158318131
Centisome position: 86.45
GC content: 69.02
Gene sequence:
>1146_bases GTGGGAGCGCATCACGAACTGCTCGACGCCGCACGCGCCGAGACCGGACTTACCGACTTCGGTGAGGACACGTTCCTGGA GGGCCTGGAGGTGCTCGTCCGCGCTCTCCAGCAGGAGGCCGCGCTGAACAGCACCGGCCAGGCGGCGTTACGCAAAATGA TCGTCGGCCTGTTGAGCCAGCGGCTGCAGATCGAGGACTGGTACCGGCGCCAGCCCGAGATCGACGACGAGCGGATCACC GCGCCGCTGATCGGGCTCGGCCTGCCGCGCACCGGGTCGACGGCGCTGTCGTTCCTGCTGGCCGAGGACCCGAACGCCCG GTCGCTGCGGATGTGGGAGGCGACGGCGCCCTGCCCGCCGCCGTCCACGGTCCACGGTGACGACAAGAGGATCGAGGACG GCCGGGCCGACGTGGCGGAACGGAAGCGGACCTCGCCGCGCCGGCTCGCGCTCGTCCCGGCCAGCGCGACCGGCCCGACG GAGTGCCAGAGCCTGATGGCGCTCGACTTCCGGGCGCACTTCTTCCAGGCGTTCGCCTACGTACCGTCCTATTCGAAGTG GCTTCTCAATTCCGATCTCACCTCGACCTACCGGTACGAGCTGCGTGCGCTGAAACTGTTGCAGTGGGGCTTCGAGGCCC AGCCGTGGCGGCTGAAGTGCCCGACCCACCTGCTCTTCCTGGACGATCTCGACAAGGTGTTCCCGGACGCCCGGTTCGTG ATGACGCACCGCGATCCCGCCGAGGTCATGGTGTCGGTGGCCGACCTCTACGCCGCGGTGGCCCGTTCGTACTGCGACGA CATCGACGAGCGCTATCTCGGCCAGCTCAACATCGAGCACTGGTCGGTCGGCATGGAGCGGGCGCTGGCGTTCCGCCAGA AGGCCGGCGACGACCGGTTCTACGACATCGACTTCCGGGCGATGCAGCGTGATCCGCTCGGCGAGATCCGCGGGCTCTAC GCCTGGCTCGGCGAGTCCGTCACCCCGGAGTTCGAGGCCGGAATGCAGGGATGGTGGCGGGAGAACGCGGAGAAGCGCGA GCGCAACGTCCACCCGGACCCGTCGACGTTCGGTATCGACGTCGACCGGATCCGCCCGCTGTTCGCCGACTACACCGCGC GTGCGGCGGCCTGGACCGCGCACTAG
Upstream 100 bases:
>100_bases ATCCCCAGTCGCCCAGTCGCCCAATCGCATAGCCGCCTGGGCCCATAGTCACCCGCGACGTACGCCGCGGGTGGCGGCCC ACGTCCGAAGGGGAGAAACC
Downstream 100 bases:
>100_bases CTCGACCGCTCATCGAAAGGAAAGCAGTGCAGGACGAGAGCGTCTACTACGACCCGTACGACTTCGAGATCGACGCGAAC CCCTACCCGGTGTGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MGAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQRLQIEDWYRRQPEIDDERIT APLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPPPSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPT ECQSLMALDFRAHFFQAFAYVPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFV MTHRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRFYDIDFRAMQRDPLGEIRGLY AWLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGIDVDRIRPLFADYTARAAAWTAH
Sequences:
>Translated_381_residues MGAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQRLQIEDWYRRQPEIDDERIT APLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPPPSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPT ECQSLMALDFRAHFFQAFAYVPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFV MTHRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRFYDIDFRAMQRDPLGEIRGLY AWLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGIDVDRIRPLFADYTARAAAWTAH >Mature_380_residues GAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQRLQIEDWYRRQPEIDDERITA PLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPPPSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPTE CQSLMALDFRAHFFQAFAYVPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFVM THRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRFYDIDFRAMQRDPLGEIRGLYA WLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGIDVDRIRPLFADYTARAAAWTAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43305; Mature: 43174
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQ CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLQIEDWYRRQPEIDDERITAPLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPP HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCC PSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPTECQSLMALDFRAHFFQAFAY CCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH VPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFV CCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEHHHHHHHCCCCEEE MTHRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRF EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE YDIDFRAMQRDPLGEIRGLYAWLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGID EECCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCC VDRIRPLFADYTARAAAWTAH HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GAHHELLDAARAETGLTDFGEDTFLEGLEVLVRALQQEAALNSTGQAALRKMIVGLLSQ CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLQIEDWYRRQPEIDDERITAPLIGLGLPRTGSTALSFLLAEDPNARSLRMWEATAPCPP HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCC PSTVHGDDKRIEDGRADVAERKRTSPRRLALVPASATGPTECQSLMALDFRAHFFQAFAY CCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH VPSYSKWLLNSDLTSTYRYELRALKLLQWGFEAQPWRLKCPTHLLFLDDLDKVFPDARFV CCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEHHHHHHHCCCCEEE MTHRDPAEVMVSVADLYAAVARSYCDDIDERYLGQLNIEHWSVGMERALAFRQKAGDDRF EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE YDIDFRAMQRDPLGEIRGLYAWLGESVTPEFEAGMQGWWRENAEKRERNVHPDPSTFGID EECCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCC VDRIRPLFADYTARAAAWTAH HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA