Definition | Frankia sp. EAN1pec chromosome, complete genome. |
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Accession | NC_009921 |
Length | 8,982,042 |
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The map label for this gene is cyp123 [H]
Identifier: 158318131
GI number: 158318131
Start: 7762944
End: 7764143
Strand: Reverse
Name: cyp123 [H]
Synonym: Franean1_6395
Alternate gene names: 158318131
Gene position: 7764143-7762944 (Counterclockwise)
Preceding gene: 158318132
Following gene: 158318130
Centisome position: 86.44
GC content: 69.08
Gene sequence:
>1200_bases GTGCAGGACGAGAGCGTCTACTACGACCCGTACGACTTCGAGATCGACGCGAACCCCTACCCGGTGTGGCGGCGGCTGCG GGATTCCGCGCCGCTGTACTACAACGAGAAGTACGACTTCTACGCGCTGAGCCGGTTCGAGGACGTCGAGAAGGCGTTGA CGGACTTCGGGACGTACACCTCGGGCAAGGGTTTCATCCTCGAAGTGATCAAAGCCGGTATCAGGCTGCCGCCCGGCAAC CTCCTGGCGGAGGACCCGCCGCTGCACGACATCCACCGCGGTCTGCTGTCGCGGGTGTTCACGCCGCGGAAGATGGCCGC GCTCGAGCCGCAGGTGCGCGAGCTGTGCGCCCGCATCCTCGACGAGCTGGTCGGCACCGACGGCTTCGACTTCGTCGCCG ATCTCGGCGCGATCGTTCCGATGCGGGTCATCGGCATGATGCTCGGCATCCCGGAGAGCGACCAGGTGGCGATCCGTGAC GCCGGTACGCGGCGGCACCAGCTCACCGAGGGTGAGGCGCCGGCGCCGACCGACGCCCGGTCGACGGCGCAGCCGTTCGC CGACTACATCGACTGGCGGGCCACCCATCCCTCCGACGACCTGATGACCGAGCTGCTGCGGGCCGAGTTCGAGGACGAGA CCGGCACCACCCGCCGGCTCACCCGCGACGAGGTCCTGACGTACACCTCGGTGCTGGCCGGTGCCGGCAACGAGACCACC CGCCGGCTCATCGGCTGGACGGGACAGCTGCTCGGCGAGCACCCGGACCAGTGCCGGGAGCTCGCCGCGGACCACTCGAA CGTCCCGCAGGCGATCGAGGAGATCCTCCGGTTCGAGTCGCCGTCTCCGGTGCAGGGCCGGGTGGTCTCCCGCGACGTCG AGCACCATGGCGGCACCATCCCGGGCACCATCCCGGAGGGGAGCGCGGTGATTCTGCTCAACGCCTCCGCGAACCGTGAC GAGCGGCACTTCGCCGACCCGGACACCTTCGACATCCACCGCCGGATCGACCGGCATCTCGCCTTCGGGCACGGCCTGCA CTTCTGCCTCGGCGCCTCGCTGGCCCGGATGGAAGGCCGGGTCGTGCTCGATGAGGTGCTGAAGCGGTGGAGCAGCTGGG AGGTCGACCGCGACAACTCCGTGCTCGACCACACCTCCACGACGCGAGGGTGGATGAACCTGCCGGTGGTCACGTCGTGA
Upstream 100 bases:
>100_bases GTATCGACGTCGACCGGATCCGCCCGCTGTTCGCCGACTACACCGCGCGTGCGGCGGCCTGGACCGCGCACTAGCTCGAC CGCTCATCGAAAGGAAAGCA
Downstream 100 bases:
>100_bases GGAACAACTCCTAGGCAAGCAGAAGTTGCGCAGGACGGCCGGCCCGGCGGGAGGATGAGCAGGATGCACCGAGAGCGGAC ACACGGAGTTCGGGCGCGCC
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MQDESVYYDPYDFEIDANPYPVWRRLRDSAPLYYNEKYDFYALSRFEDVEKALTDFGTYTSGKGFILEVIKAGIRLPPGN LLAEDPPLHDIHRGLLSRVFTPRKMAALEPQVRELCARILDELVGTDGFDFVADLGAIVPMRVIGMMLGIPESDQVAIRD AGTRRHQLTEGEAPAPTDARSTAQPFADYIDWRATHPSDDLMTELLRAEFEDETGTTRRLTRDEVLTYTSVLAGAGNETT RRLIGWTGQLLGEHPDQCRELAADHSNVPQAIEEILRFESPSPVQGRVVSRDVEHHGGTIPGTIPEGSAVILLNASANRD ERHFADPDTFDIHRRIDRHLAFGHGLHFCLGASLARMEGRVVLDEVLKRWSSWEVDRDNSVLDHTSTTRGWMNLPVVTS
Sequences:
>Translated_399_residues MQDESVYYDPYDFEIDANPYPVWRRLRDSAPLYYNEKYDFYALSRFEDVEKALTDFGTYTSGKGFILEVIKAGIRLPPGN LLAEDPPLHDIHRGLLSRVFTPRKMAALEPQVRELCARILDELVGTDGFDFVADLGAIVPMRVIGMMLGIPESDQVAIRD AGTRRHQLTEGEAPAPTDARSTAQPFADYIDWRATHPSDDLMTELLRAEFEDETGTTRRLTRDEVLTYTSVLAGAGNETT RRLIGWTGQLLGEHPDQCRELAADHSNVPQAIEEILRFESPSPVQGRVVSRDVEHHGGTIPGTIPEGSAVILLNASANRD ERHFADPDTFDIHRRIDRHLAFGHGLHFCLGASLARMEGRVVLDEVLKRWSSWEVDRDNSVLDHTSTTRGWMNLPVVTS >Mature_399_residues MQDESVYYDPYDFEIDANPYPVWRRLRDSAPLYYNEKYDFYALSRFEDVEKALTDFGTYTSGKGFILEVIKAGIRLPPGN LLAEDPPLHDIHRGLLSRVFTPRKMAALEPQVRELCARILDELVGTDGFDFVADLGAIVPMRVIGMMLGIPESDQVAIRD AGTRRHQLTEGEAPAPTDARSTAQPFADYIDWRATHPSDDLMTELLRAEFEDETGTTRRLTRDEVLTYTSVLAGAGNETT RRLIGWTGQLLGEHPDQCRELAADHSNVPQAIEEILRFESPSPVQGRVVSRDVEHHGGTIPGTIPEGSAVILLNASANRD ERHFADPDTFDIHRRIDRHLAFGHGLHFCLGASLARMEGRVVLDEVLKRWSSWEVDRDNSVLDHTSTTRGWMNLPVVTS
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44850; Mature: 44850
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDESVYYDPYDFEIDANPYPVWRRLRDSAPLYYNEKYDFYALSRFEDVEKALTDFGTYT CCCCCEEECCCCEEECCCCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCC SGKGFILEVIKAGIRLPPGNLLAEDPPLHDIHRGLLSRVFTPRKMAALEPQVRELCARIL CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH DELVGTDGFDFVADLGAIVPMRVIGMMLGIPESDQVAIRDAGTRRHQLTEGEAPAPTDAR HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCH STAQPFADYIDWRATHPSDDLMTELLRAEFEDETGTTRRLTRDEVLTYTSVLAGAGNETT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH RRLIGWTGQLLGEHPDQCRELAADHSNVPQAIEEILRFESPSPVQGRVVSRDVEHHGGTI HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC PGTIPEGSAVILLNASANRDERHFADPDTFDIHRRIDRHLAFGHGLHFCLGASLARMEGR CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VVLDEVLKRWSSWEVDRDNSVLDHTSTTRGWMNLPVVTS HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQDESVYYDPYDFEIDANPYPVWRRLRDSAPLYYNEKYDFYALSRFEDVEKALTDFGTYT CCCCCEEECCCCEEECCCCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCC SGKGFILEVIKAGIRLPPGNLLAEDPPLHDIHRGLLSRVFTPRKMAALEPQVRELCARIL CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH DELVGTDGFDFVADLGAIVPMRVIGMMLGIPESDQVAIRDAGTRRHQLTEGEAPAPTDAR HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCH STAQPFADYIDWRATHPSDDLMTELLRAEFEDETGTTRRLTRDEVLTYTSVLAGAGNETT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH RRLIGWTGQLLGEHPDQCRELAADHSNVPQAIEEILRFESPSPVQGRVVSRDVEHHGGTI HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC PGTIPEGSAVILLNASANRDERHFADPDTFDIHRRIDRHLAFGHGLHFCLGASLARMEGR CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VVLDEVLKRWSSWEVDRDNSVLDHTSTTRGWMNLPVVTS HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]