Definition | Frankia sp. EAN1pec chromosome, complete genome. |
---|---|
Accession | NC_009921 |
Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318130
Identifier: 158318130
GI number: 158318130
Start: 7761974
End: 7762816
Strand: Reverse
Name: 158318130
Synonym: Franean1_6394
Alternate gene names: NA
Gene position: 7762816-7761974 (Counterclockwise)
Preceding gene: 158318131
Following gene: 158318129
Centisome position: 86.43
GC content: 74.97
Gene sequence:
>843_bases ATGTGCGCTGACAGCTCCGACGCGGCGCGGGAGCTGGCGGCGGTGCTCCCCGCGGACACGGTGGGCCTGCTGGAGGGCCT GACCACGACCCGGGCCATCCGCCGTTACACCGACGAGCCGGTGCCCCGCGAAGCGCTGCGCGCCATGCTCTTCGCGGCCA CCAGGGCACCCAGCGGCTCCAACCGGCAGCCGTTCCGGTTCATCGTGCTGACCGACGGCCCGAAGGCCGGGGCGGCGAAG AAGCTGATCGGTGACGCCGCGCGGCGGACCTGGGGCGGCAAGCGCCAGGTGGACCGGTACGACAGCGGGACGGGGACGGT CGCGGACTCGCCCAAGGCCCGGATGGCCGCGGCGATGCAGCAGTTCGTCGACGGGTTCGAGCGGGTGCCCGTGCTGATCC TGCCGTGCCTGGTGCGCTACCGGGACCCGACTCCGTCCGAGGGGGCGTCGGTGTATCCGGCGTGCCAGAACCTGCTGCTG GCGGCCCGCGCGCTCGGCTACGGCGGGGCGTTCACCGGCTGGAACTTCGCCGTCGACGCGCAACTGCGCGAGCTGCTCGG CGTGCCCGAGGGCACGTTCGTTGCCGGCACCATCACTCTGGGCCGGCCGGCGGGCCGGCACGGCCCGGTGCGCCGCCGCC CGATGGCCGAGCTTGTGTTCGAGGAGGAATGGGGAGCGCCGGCGGACTGGGCGCTCGACCCACCCGGCACCGCGTTCACC TCCGCCGGCCCGCCCCGGCCCCCGGCCGTAGCGGGCAACGGCACTGCGGGCGGGAGCACTGCGGGCGGCGGCATCACCGG CGGCATCACCGGCGGCAACGACGAGGAAAGGCCCCGGTCATGA
Upstream 100 bases:
>100_bases GCGCAGGACGGCCGGCCCGGCGGGAGGATGAGCAGGATGCACCGAGAGCGGACACACGGAGTTCGGGCGCGCCCGAACCA GGTGAGGACCCGGCGGACCG
Downstream 100 bases:
>100_bases CGCCGGTCGACGGTACGGACACACCGGTACGGACGCAGAAGGGTAGCCCTGGCATGGGCCGACTGACACATCTGCAGCGC CTGGAGGCGGAGAGCATCCA
Product: nitroreductase
Products: NA
Alternate protein names: NADH Dehydrogenase; Oxidoreductase; Nitroreductase Family Protein; Ribonuclease BN
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MCADSSDAARELAAVLPADTVGLLEGLTTTRAIRRYTDEPVPREALRAMLFAATRAPSGSNRQPFRFIVLTDGPKAGAAK KLIGDAARRTWGGKRQVDRYDSGTGTVADSPKARMAAAMQQFVDGFERVPVLILPCLVRYRDPTPSEGASVYPACQNLLL AARALGYGGAFTGWNFAVDAQLRELLGVPEGTFVAGTITLGRPAGRHGPVRRRPMAELVFEEEWGAPADWALDPPGTAFT SAGPPRPPAVAGNGTAGGSTAGGGITGGITGGNDEERPRS
Sequences:
>Translated_280_residues MCADSSDAARELAAVLPADTVGLLEGLTTTRAIRRYTDEPVPREALRAMLFAATRAPSGSNRQPFRFIVLTDGPKAGAAK KLIGDAARRTWGGKRQVDRYDSGTGTVADSPKARMAAAMQQFVDGFERVPVLILPCLVRYRDPTPSEGASVYPACQNLLL AARALGYGGAFTGWNFAVDAQLRELLGVPEGTFVAGTITLGRPAGRHGPVRRRPMAELVFEEEWGAPADWALDPPGTAFT SAGPPRPPAVAGNGTAGGSTAGGGITGGITGGNDEERPRS >Mature_280_residues MCADSSDAARELAAVLPADTVGLLEGLTTTRAIRRYTDEPVPREALRAMLFAATRAPSGSNRQPFRFIVLTDGPKAGAAK KLIGDAARRTWGGKRQVDRYDSGTGTVADSPKARMAAAMQQFVDGFERVPVLILPCLVRYRDPTPSEGASVYPACQNLLL AARALGYGGAFTGWNFAVDAQLRELLGVPEGTFVAGTITLGRPAGRHGPVRRRPMAELVFEEEWGAPADWALDPPGTAFT SAGPPRPPAVAGNGTAGGSTAGGGITGGITGGNDEERPRS
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29302; Mature: 29302
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCADSSDAARELAAVLPADTVGLLEGLTTTRAIRRYTDEPVPREALRAMLFAATRAPSGS CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC NRQPFRFIVLTDGPKAGAAKKLIGDAARRTWGGKRQVDRYDSGTGTVADSPKARMAAAMQ CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH QFVDGFERVPVLILPCLVRYRDPTPSEGASVYPACQNLLLAARALGYGGAFTGWNFAVDA HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHH QLRELLGVPEGTFVAGTITLGRPAGRHGPVRRRPMAELVFEEEWGAPADWALDPPGTAFT HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC SAGPPRPPAVAGNGTAGGSTAGGGITGGITGGNDEERPRS CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MCADSSDAARELAAVLPADTVGLLEGLTTTRAIRRYTDEPVPREALRAMLFAATRAPSGS CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC NRQPFRFIVLTDGPKAGAAKKLIGDAARRTWGGKRQVDRYDSGTGTVADSPKARMAAAMQ CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH QFVDGFERVPVLILPCLVRYRDPTPSEGASVYPACQNLLLAARALGYGGAFTGWNFAVDA HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHH QLRELLGVPEGTFVAGTITLGRPAGRHGPVRRRPMAELVFEEEWGAPADWALDPPGTAFT HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC SAGPPRPPAVAGNGTAGGSTAGGGITGGITGGNDEERPRS CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA