Definition | Frankia sp. EAN1pec chromosome, complete genome. |
---|---|
Accession | NC_009921 |
Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is terE [H]
Identifier: 158313685
GI number: 158313685
Start: 2221728
End: 2222345
Strand: Direct
Name: terE [H]
Synonym: Franean1_1849
Alternate gene names: 158313685
Gene position: 2221728-2222345 (Clockwise)
Preceding gene: 158313681
Following gene: 158313688
Centisome position: 24.74
GC content: 67.48
Gene sequence:
>618_bases ATGCCGCGGGCCCGAGCTCGGTACTACGCTCACGACATGTCATCGGTGTCGCTGTCCAAAGGCGGCAATGTCTCGCTCAG CAAGGTCGCGCCCAACCTGACGGCGGTTACCGTCGGTCTCGGTTGGCAGGTCCGTCAGACCACCGGCGCGCCGTACGACC TCGATGCCTCGGCGATCGTCGTGGGTGATTCGGGCCGTGTGCTGTCGGACAGCCACTTCGTGTTCTTCAACAACCTGGTC AGCCCGGACGGCGCTGTGACCCACCTGGGGGACAACCTCGTGGGCGGCGGCGGGGGCGACGACGAGCAGATCAACGTCGA TCTCCGGATCCTCTCCCCGCAGGCCAGCAAGGTGGTCTTCGCGGTGTCGATCTACGACGCGGACGCCCGGCGGCAGACCT TCGGTCAGGTCCGCGACGCCTTCATCCGGGTGGCGGACGCGACGACCGGCGCCGAGGTCGCCCGGTACGACCTCACCGAG GACGCCTCGACCGAGACCGCGATGATCTTCGGTGAGCTTTACCGCTACGGCGTTGAGTGGAAGTTCCGGGCCGTCGGGCA GGGCTACGCGTCCGGCCTGCGCGGAATCGCGCTCGACTTCGGCGTCAACGTCTCCTAG
Upstream 100 bases:
>100_bases GCCAGGGCACGCGCGGACCAACCCGCCGGTGCGTGCGCCGGCCTGAATCCGTGGCGGCACAACGAAGTGAGGCCGGAACG AGGCAAGTGCGGGGGAGGGG
Downstream 100 bases:
>100_bases CGGACCCGCCGACCGCCCTCAGAAGGACAGCCGGGATGGTGTCTGCCGCCGCCCGACGATCATCACCCGGACCATCCGGG TGTTCGCGTCGACCCGGTAC
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MPRARARYYAHDMSSVSLSKGGNVSLSKVAPNLTAVTVGLGWQVRQTTGAPYDLDASAIVVGDSGRVLSDSHFVFFNNLV SPDGAVTHLGDNLVGGGGGDDEQINVDLRILSPQASKVVFAVSIYDADARRQTFGQVRDAFIRVADATTGAEVARYDLTE DASTETAMIFGELYRYGVEWKFRAVGQGYASGLRGIALDFGVNVS
Sequences:
>Translated_205_residues MPRARARYYAHDMSSVSLSKGGNVSLSKVAPNLTAVTVGLGWQVRQTTGAPYDLDASAIVVGDSGRVLSDSHFVFFNNLV SPDGAVTHLGDNLVGGGGGDDEQINVDLRILSPQASKVVFAVSIYDADARRQTFGQVRDAFIRVADATTGAEVARYDLTE DASTETAMIFGELYRYGVEWKFRAVGQGYASGLRGIALDFGVNVS >Mature_204_residues PRARARYYAHDMSSVSLSKGGNVSLSKVAPNLTAVTVGLGWQVRQTTGAPYDLDASAIVVGDSGRVLSDSHFVFFNNLVS PDGAVTHLGDNLVGGGGGDDEQINVDLRILSPQASKVVFAVSIYDADARRQTFGQVRDAFIRVADATTGAEVARYDLTED ASTETAMIFGELYRYGVEWKFRAVGQGYASGLRGIALDFGVNVS
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 21846; Mature: 21714
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRARARYYAHDMSSVSLSKGGNVSLSKVAPNLTAVTVGLGWQVRQTTGAPYDLDASAIV CCCCCCEEECCCCCEEEECCCCCEEHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCEEE VGDSGRVLSDSHFVFFNNLVSPDGAVTHLGDNLVGGGGGDDEQINVDLRILSPQASKVVF ECCCCCEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEE AVSIYDADARRQTFGQVRDAFIRVADATTGAEVARYDLTEDASTETAMIFGELYRYGVEW EEEEECCCHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCE KFRAVGQGYASGLRGIALDFGVNVS EEEECCCCHHCCCCEEEEECCCCCC >Mature Secondary Structure PRARARYYAHDMSSVSLSKGGNVSLSKVAPNLTAVTVGLGWQVRQTTGAPYDLDASAIV CCCCCEEECCCCCEEEECCCCCEEHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCEEE VGDSGRVLSDSHFVFFNNLVSPDGAVTHLGDNLVGGGGGDDEQINVDLRILSPQASKVVF ECCCCCEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEE AVSIYDADARRQTFGQVRDAFIRVADATTGAEVARYDLTEDASTETAMIFGELYRYGVEW EEEEECCCHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCE KFRAVGQGYASGLRGIALDFGVNVS EEEECCCCHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]