Definition | Frankia sp. EAN1pec chromosome, complete genome. |
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Accession | NC_009921 |
Length | 8,982,042 |
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The map label for this gene is 158313681
Identifier: 158313681
GI number: 158313681
Start: 2212633
End: 2213691
Strand: Direct
Name: 158313681
Synonym: Franean1_1845
Alternate gene names: NA
Gene position: 2212633-2213691 (Clockwise)
Preceding gene: 158313680
Following gene: 158313685
Centisome position: 24.63
GC content: 76.96
Gene sequence:
>1059_bases ATGGCACAACGGATGGCGGACGAGATCAGTCCCGCTGGCCGGCACCGTTCTCCCTGGGGTCGCTCCAAACGGATCCTCCC CATCCGGTGGGGGCGGGTCGCGGCCGCGGTGGGGGCCGCGGCGGCCCTGGCCACGACCCTGTTCCTGATCCACAACAGCG GGTCGGGGCCGGCGTCCGCGGTGCGGGACCCGGCCGGTGCGCGGACCAGCATCGTCGTGTCGACCTCCGTCGCGTCCCCG CCGGTTCCCTCGCCGACGGCGAACGGCCCCGTCCCCGTCGGGGCGTTCGGGGCATCCGGGCCGCCCGGGCCCGTGGAGAG CTCCGGGGTCTCGGCGTCTCCCGAACCGTCCCAGGCGGGCGGCACGTCCGCGCCGGCTCGCCCGGGAGCGGGCACGGGCG GCCCGCGCGGGACCCCGCCGGCCGGGCCGGCGATCGGGCTGAGCCGCACCGACGTCGACTTCGGCGAGGTGGAGTCGACG ATCAGGCTCGACGTGCTCGGCGTCGGGACGTCACCGGCGCGCGTGCGCGTTGGCGGCACGCCCGGGTGGGTCAGCGTCGT CCCGGGGCAGGACGTCGTCGATCCGGGCGCGCAGGTGCCGCTCGTGGTCACCCTCGACCGGGCGGTGGCTCCGCCGGGCT CGATCGACCTGGACGTCCCGGTCTCGGCCGTCGACGGCTCCGGCGGCGGGAACCTGCGGATCACCGCGCGGGTCTCCGGG GCACCGGGGCTCAGCGGCGTCTCGGCCGCGCCGACCACGATCCTCCCCAGCGGCTGCGCCGGTGATCAGGGCGCCACGCA GGCGACAGTGACCGCCACGGTCGTCGACCCGACGGGCGTCCTCGGCGTCGAGGTGCGCACCCGGGCGCCGGACGGACAGG CCACCACCATTCCGCTCCAACTGGGCACGGCGGTGGACGACCGGTCGACCTGGTCCGGGCCGATCGGGCCGGTGCCGGCG GCGGGGACGATCACCTACACCGTGGTGGCGACCGACCTCGACGGCCGGAGCTCGACGACCGACGGGTCCGTCGAGGTGCG CCCCTGCCCCGCCGGTTGA
Upstream 100 bases:
>100_bases GGTAACCCAGACGCTGGTGTGGTGGGTTTGGTGGGGACTTCGTCACGGAAACGAGTGAATCGGGGTCCTGCATCCACTTT TGGGCCTACGCTCGGACCCG
Downstream 100 bases:
>100_bases CCGCCGGAGGCCTGCGGCTGACCGCCGGAACGGCGCCGCCCGGCTCGGGGGGTGCCGGGCGGCGCGGGCTCATGGTCTCA TCCGCCGGGCGCGGGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MAQRMADEISPAGRHRSPWGRSKRILPIRWGRVAAAVGAAAALATTLFLIHNSGSGPASAVRDPAGARTSIVVSTSVASP PVPSPTANGPVPVGAFGASGPPGPVESSGVSASPEPSQAGGTSAPARPGAGTGGPRGTPPAGPAIGLSRTDVDFGEVEST IRLDVLGVGTSPARVRVGGTPGWVSVVPGQDVVDPGAQVPLVVTLDRAVAPPGSIDLDVPVSAVDGSGGGNLRITARVSG APGLSGVSAAPTTILPSGCAGDQGATQATVTATVVDPTGVLGVEVRTRAPDGQATTIPLQLGTAVDDRSTWSGPIGPVPA AGTITYTVVATDLDGRSSTTDGSVEVRPCPAG
Sequences:
>Translated_352_residues MAQRMADEISPAGRHRSPWGRSKRILPIRWGRVAAAVGAAAALATTLFLIHNSGSGPASAVRDPAGARTSIVVSTSVASP PVPSPTANGPVPVGAFGASGPPGPVESSGVSASPEPSQAGGTSAPARPGAGTGGPRGTPPAGPAIGLSRTDVDFGEVEST IRLDVLGVGTSPARVRVGGTPGWVSVVPGQDVVDPGAQVPLVVTLDRAVAPPGSIDLDVPVSAVDGSGGGNLRITARVSG APGLSGVSAAPTTILPSGCAGDQGATQATVTATVVDPTGVLGVEVRTRAPDGQATTIPLQLGTAVDDRSTWSGPIGPVPA AGTITYTVVATDLDGRSSTTDGSVEVRPCPAG >Mature_351_residues AQRMADEISPAGRHRSPWGRSKRILPIRWGRVAAAVGAAAALATTLFLIHNSGSGPASAVRDPAGARTSIVVSTSVASPP VPSPTANGPVPVGAFGASGPPGPVESSGVSASPEPSQAGGTSAPARPGAGTGGPRGTPPAGPAIGLSRTDVDFGEVESTI RLDVLGVGTSPARVRVGGTPGWVSVVPGQDVVDPGAQVPLVVTLDRAVAPPGSIDLDVPVSAVDGSGGGNLRITARVSGA PGLSGVSAAPTTILPSGCAGDQGATQATVTATVVDPTGVLGVEVRTRAPDGQATTIPLQLGTAVDDRSTWSGPIGPVPAA GTITYTVVATDLDGRSSTTDGSVEVRPCPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34304; Mature: 34172
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRMADEISPAGRHRSPWGRSKRILPIRWGRVAAAVGAAAALATTLFLIHNSGSGPASA CCHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHEEEEEEEECCCCCCHHH VRDPAGARTSIVVSTSVASPPVPSPTANGPVPVGAFGASGPPGPVESSGVSASPEPSQAG HCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GTSAPARPGAGTGGPRGTPPAGPAIGLSRTDVDFGEVESTIRLDVLGVGTSPARVRVGGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCEEEECCC PGWVSVVPGQDVVDPGAQVPLVVTLDRAVAPPGSIDLDVPVSAVDGSGGGNLRITARVSG CCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCEEEECCCCCCEEEEEEEECC APGLSGVSAAPTTILPSGCAGDQGATQATVTATVVDPTGVLGVEVRTRAPDGQATTIPLQ CCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEE LGTAVDDRSTWSGPIGPVPAAGTITYTVVATDLDGRSSTTDGSVEVRPCPAG ECCEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCC >Mature Secondary Structure AQRMADEISPAGRHRSPWGRSKRILPIRWGRVAAAVGAAAALATTLFLIHNSGSGPASA CHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHEEEEEEEECCCCCCHHH VRDPAGARTSIVVSTSVASPPVPSPTANGPVPVGAFGASGPPGPVESSGVSASPEPSQAG HCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC GTSAPARPGAGTGGPRGTPPAGPAIGLSRTDVDFGEVESTIRLDVLGVGTSPARVRVGGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCEEEECCC PGWVSVVPGQDVVDPGAQVPLVVTLDRAVAPPGSIDLDVPVSAVDGSGGGNLRITARVSG CCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCEEEECCCCCCEEEEEEEECC APGLSGVSAAPTTILPSGCAGDQGATQATVTATVVDPTGVLGVEVRTRAPDGQATTIPLQ CCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEE LGTAVDDRSTWSGPIGPVPAAGTITYTVVATDLDGRSSTTDGSVEVRPCPAG ECCEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA