Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963387

Identifier: 157963387

GI number: 157963387

Start: 4359631

End: 4361781

Strand: Direct

Name: 157963387

Synonym: Spea_3573

Alternate gene names: NA

Gene position: 4359631-4361781 (Clockwise)

Preceding gene: 157963381

Following gene: 157963396

Centisome position: 84.25

GC content: 46.82

Gene sequence:

>2151_bases
ATGATGATAATGACAAAAAAAACATCACTAGCTTTACTGATTGGCTCAGCGCTATTTATAGGCGGTTGCTCAGATGGTAA
AGATGGCAAAGATGGAGAAGATGGCACACCTGGTGGCGGCGGAGAACCTGGCACTTCAGGCCTACACATAGATATGGCCG
CTGAAGCCATCGCAACAATCAATAATGCCGTATATGCAGACGGTATCATCACCCTTGATTTTGAACTTGAAAACAAACAA
GGCGTTGGCTTATACGGTTTAAGCTCAGACAACAAGTTTCACGATTTCCGCTTCTCACTCGCCCAACTACAAACCAACGA
TGGAGCAGAGCTAAAACAGTGGTTTTCACTATTAAACGCAGCAACAAATGACGCAGGAACCACCTTCGAGCAAGGGTTCG
AATCAATTAAAGATTGCGCTGATTGCTTAGTTGACCATAAAGACGGTACTTACACTTATACTTTCAAGACTAATCTCACA
ACAGCTGACGACGCTGCAGGCATCGTTTTCGATCCAGCATTAACCCAGCGTATTGCAATGGAAATGCAGTTTGAATATGA
CTCAGGTCATGAGCTAGCAGAAAACGCCCATTACGATTGGATCCCTGCGACAAACGCAACTGACGGTGTTGAGACTCGCG
ATCTTGTGACCTTAGAGACATGTTACTCTTGTCACCAACCTGCTAGCCTAAAAGCGCACGGCGGCCGCCGCTTAGACATG
GAAAACTGCCAATCTTGTCATAACGGTCTTGTTACCGATCCTAAGGCTATCTCGGTAGAGCTAGGCCATATGGTGCATGC
TATTCATATGGGCGAAAACCGTGAAGGCAAAGATGCTGAAGGTAATGTAGTGCCTATGCCATACACCATTGCTGGCTACG
GCGGCGATCATGCATTCGACTACCCAGCATTCCCAACTAAGCCTGTTATGGACTGTACAACCTGTCACGTTGAAGATGAA
ACCCTAGCAGATAAAGATCTGTGGTTGGCCAACGCCAATACCAATTCCTGTACAGGCTGTCATACAGACTCTCCTGCACA
GCACAAATCGGATAAGAATCCTGAACTTGCTTGTACCGATTGCCACCAAGTTGACCACCGCAAGTTTAATAAGCCATACG
AGTCAGCAGCCGCTTATGACGTGAAATTTGAAAATGTTAAAGTAGAAAACGGTGCTATTAGTTTCGAAGCAAAAGCCCTG
GATAGTGAAGGCGCGATTGTTTCAGGCTTAAGTCACAAAGTTTATAAATATACCGCACCTGTGGTACAGGTTTCTTGGAA
TGTTGAGAACGACGGCGCAATTGGTGATGCAACAGCAGACTCTAGCCCATGGGCTCGCGAAATTGAGTTCCTTCGTCCAA
CAACGACTAACCCAACGCCAGATCATGTATTACCAGACAATGGTGTGATGACGGTTGATACGAAGGATATGGGTATTCCA
GACGGCGTGTCTGTAGAGCTTATGCCAATCTTCAGCATCTGTTTCGATGCGCAAGGCGTTGATATTGACTGCGCTTCAGA
TAAAGTTGCAGGCAGTGCTTATATCAAATCAGAGCCACACCGCATCAATATGCCAACCGATGACAAAGGCGATGTCGTTG
CACGTCGCGCCATCTTAGATGAAGCTAAGTGCCGCGATTGTCACAGCGCTGAAATTCGTCATAAAGATAACGGTCTTGTC
GCCTGTGAGGCTTGTCATACCAGCGATCAAGGCTTACAAGATGATACGGTAGATGGCGTAAAACAGTTCCGTGGTGCAGG
TTTTGCTTGGAAGGTACACAAAGCATCTGGTCACTATATGAATAAGAAATATGGTGGTTCAGGTACGGTAATGAAGACCG
ACTGTGCAACTTGTCACGTGACAGATGAAAGCGGCAATGTCGACGGTATCGAGTTAGGCCGTGCTAGCGAAGGCCGTACC
TACGTATTCCCAACCACTAAGACTGATGGCACAGCTATGTACGCTTCTGCTGACGCTGGTGCTTGTATGACTTGTCACTG
GGGTCATGAGAGTGACGCCATGCTAAGCCACTTCAAGAGCAATGGCGGCTACTATGGTCCAGATAAGGCTGATGCAATAA
AAGGTACAGCTGAAGAAGCTTGCGCCGTTTGTCATAGCCCAGCCAAGTTGATGGAAGTACACAATAAGTAA

Upstream 100 bases:

>100_bases
CTAATAAAGCAAGAATTCATCAAGTGATCCACTTCATATCAAAGGCCAAGCAAGATTAATAACATTTCAGCAACCGAGAA
TGGTTACCTTTAAGGAATGT

Downstream 100 bases:

>100_bases
ACTGATTCAGCTTACTTAAGCAGTCTGAGGCGCCCTCGGGAGCCTCATCTGTTTACCTGATAAAGAGAAACGTCAGGTAA
ACACCACCTAGGATAAAGGG

Product: decaheme cytochrome c

Products: NA

Alternate protein names: Decaheme C-Type Cytochrome OmcA/MtrC Family; Decaheme Cytochrome C MtrF; Decaheme Cytochrome C-Like Protein

Number of amino acids: Translated: 716; Mature: 716

Protein sequence:

>716_residues
MMIMTKKTSLALLIGSALFIGGCSDGKDGKDGEDGTPGGGGEPGTSGLHIDMAAEAIATINNAVYADGIITLDFELENKQ
GVGLYGLSSDNKFHDFRFSLAQLQTNDGAELKQWFSLLNAATNDAGTTFEQGFESIKDCADCLVDHKDGTYTYTFKTNLT
TADDAAGIVFDPALTQRIAMEMQFEYDSGHELAENAHYDWIPATNATDGVETRDLVTLETCYSCHQPASLKAHGGRRLDM
ENCQSCHNGLVTDPKAISVELGHMVHAIHMGENREGKDAEGNVVPMPYTIAGYGGDHAFDYPAFPTKPVMDCTTCHVEDE
TLADKDLWLANANTNSCTGCHTDSPAQHKSDKNPELACTDCHQVDHRKFNKPYESAAAYDVKFENVKVENGAISFEAKAL
DSEGAIVSGLSHKVYKYTAPVVQVSWNVENDGAIGDATADSSPWAREIEFLRPTTTNPTPDHVLPDNGVMTVDTKDMGIP
DGVSVELMPIFSICFDAQGVDIDCASDKVAGSAYIKSEPHRINMPTDDKGDVVARRAILDEAKCRDCHSAEIRHKDNGLV
ACEACHTSDQGLQDDTVDGVKQFRGAGFAWKVHKASGHYMNKKYGGSGTVMKTDCATCHVTDESGNVDGIELGRASEGRT
YVFPTTKTDGTAMYASADAGACMTCHWGHESDAMLSHFKSNGGYYGPDKADAIKGTAEEACAVCHSPAKLMEVHNK

Sequences:

>Translated_716_residues
MMIMTKKTSLALLIGSALFIGGCSDGKDGKDGEDGTPGGGGEPGTSGLHIDMAAEAIATINNAVYADGIITLDFELENKQ
GVGLYGLSSDNKFHDFRFSLAQLQTNDGAELKQWFSLLNAATNDAGTTFEQGFESIKDCADCLVDHKDGTYTYTFKTNLT
TADDAAGIVFDPALTQRIAMEMQFEYDSGHELAENAHYDWIPATNATDGVETRDLVTLETCYSCHQPASLKAHGGRRLDM
ENCQSCHNGLVTDPKAISVELGHMVHAIHMGENREGKDAEGNVVPMPYTIAGYGGDHAFDYPAFPTKPVMDCTTCHVEDE
TLADKDLWLANANTNSCTGCHTDSPAQHKSDKNPELACTDCHQVDHRKFNKPYESAAAYDVKFENVKVENGAISFEAKAL
DSEGAIVSGLSHKVYKYTAPVVQVSWNVENDGAIGDATADSSPWAREIEFLRPTTTNPTPDHVLPDNGVMTVDTKDMGIP
DGVSVELMPIFSICFDAQGVDIDCASDKVAGSAYIKSEPHRINMPTDDKGDVVARRAILDEAKCRDCHSAEIRHKDNGLV
ACEACHTSDQGLQDDTVDGVKQFRGAGFAWKVHKASGHYMNKKYGGSGTVMKTDCATCHVTDESGNVDGIELGRASEGRT
YVFPTTKTDGTAMYASADAGACMTCHWGHESDAMLSHFKSNGGYYGPDKADAIKGTAEEACAVCHSPAKLMEVHNK
>Mature_716_residues
MMIMTKKTSLALLIGSALFIGGCSDGKDGKDGEDGTPGGGGEPGTSGLHIDMAAEAIATINNAVYADGIITLDFELENKQ
GVGLYGLSSDNKFHDFRFSLAQLQTNDGAELKQWFSLLNAATNDAGTTFEQGFESIKDCADCLVDHKDGTYTYTFKTNLT
TADDAAGIVFDPALTQRIAMEMQFEYDSGHELAENAHYDWIPATNATDGVETRDLVTLETCYSCHQPASLKAHGGRRLDM
ENCQSCHNGLVTDPKAISVELGHMVHAIHMGENREGKDAEGNVVPMPYTIAGYGGDHAFDYPAFPTKPVMDCTTCHVEDE
TLADKDLWLANANTNSCTGCHTDSPAQHKSDKNPELACTDCHQVDHRKFNKPYESAAAYDVKFENVKVENGAISFEAKAL
DSEGAIVSGLSHKVYKYTAPVVQVSWNVENDGAIGDATADSSPWAREIEFLRPTTTNPTPDHVLPDNGVMTVDTKDMGIP
DGVSVELMPIFSICFDAQGVDIDCASDKVAGSAYIKSEPHRINMPTDDKGDVVARRAILDEAKCRDCHSAEIRHKDNGLV
ACEACHTSDQGLQDDTVDGVKQFRGAGFAWKVHKASGHYMNKKYGGSGTVMKTDCATCHVTDESGNVDGIELGRASEGRT
YVFPTTKTDGTAMYASADAGACMTCHWGHESDAMLSHFKSNGGYYGPDKADAIKGTAEEACAVCHSPAKLMEVHNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77085; Mature: 77085

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIMTKKTSLALLIGSALFIGGCSDGKDGKDGEDGTPGGGGEPGTSGLHIDMAAEAIATI
CEEEECCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHH
NNAVYADGIITLDFELENKQGVGLYGLSSDNKFHDFRFSLAQLQTNDGAELKQWFSLLNA
CCCEEECCEEEEEEEECCCCCCEEEEECCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHH
ATNDAGTTFEQGFESIKDCADCLVDHKDGTYTYTFKTNLTTADDAAGIVFDPALTQRIAM
CCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCCEEECHHHHHHEEE
EMQFEYDSGHELAENAHYDWIPATNATDGVETRDLVTLETCYSCHQPASLKAHGGRRLDM
EEEEECCCCCHHHHCCCCCEECCCCCCCCCCCCCEEEHHHHHCCCCCCCEECCCCCEECH
ENCQSCHNGLVTDPKAISVELGHMVHAIHMGENREGKDAEGNVVPMPYTIAGYGGDHAFD
HHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEECCEEEEECCCCCCCC
YPAFPTKPVMDCTTCHVEDETLADKDLWLANANTNSCTGCHTDSPAQHKSDKNPELACTD
CCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCEEECC
CHQVDHRKFNKPYESAAAYDVKFENVKVENGAISFEAKALDSEGAIVSGLSHKVYKYTAP
HHHHHHHHCCCCHHHCCEEEEEEEEEEEECCEEEEEEEECCCCCCEEECCCCCEEEEECC
VVQVSWNVENDGAIGDATADSSPWAREIEFLRPTTTNPTPDHVLPDNGVMTVDTKDMGIP
EEEEEEECCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCEEEECCCCCCCC
DGVSVELMPIFSICFDAQGVDIDCASDKVAGSAYIKSEPHRINMPTDDKGDVVARRAILD
CCCCEEEEEHHHHHCCCCCCEEECCCCCCCCCEEECCCCCEECCCCCCCCCHHHHHHHHH
EAKCRDCHSAEIRHKDNGLVACEACHTSDQGLQDDTVDGVKQFRGAGFAWKVHKASGHYM
HHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCC
NKKYGGSGTVMKTDCATCHVTDESGNVDGIELGRASEGRTYVFPTTKTDGTAMYASADAG
CCEECCCCCEEEECCCEEEEECCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEEECCCC
ACMTCHWGHESDAMLSHFKSNGGYYGPDKADAIKGTAEEACAVCHSPAKLMEVHNK
CEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MMIMTKKTSLALLIGSALFIGGCSDGKDGKDGEDGTPGGGGEPGTSGLHIDMAAEAIATI
CEEEECCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHH
NNAVYADGIITLDFELENKQGVGLYGLSSDNKFHDFRFSLAQLQTNDGAELKQWFSLLNA
CCCEEECCEEEEEEEECCCCCCEEEEECCCCCCHHHEEEEEEEECCCCHHHHHHHHHHHH
ATNDAGTTFEQGFESIKDCADCLVDHKDGTYTYTFKTNLTTADDAAGIVFDPALTQRIAM
CCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCCEEECHHHHHHEEE
EMQFEYDSGHELAENAHYDWIPATNATDGVETRDLVTLETCYSCHQPASLKAHGGRRLDM
EEEEECCCCCHHHHCCCCCEECCCCCCCCCCCCCEEEHHHHHCCCCCCCEECCCCCEECH
ENCQSCHNGLVTDPKAISVELGHMVHAIHMGENREGKDAEGNVVPMPYTIAGYGGDHAFD
HHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEECCEEEEECCCCCCCC
YPAFPTKPVMDCTTCHVEDETLADKDLWLANANTNSCTGCHTDSPAQHKSDKNPELACTD
CCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCEEECC
CHQVDHRKFNKPYESAAAYDVKFENVKVENGAISFEAKALDSEGAIVSGLSHKVYKYTAP
HHHHHHHHCCCCHHHCCEEEEEEEEEEEECCEEEEEEEECCCCCCEEECCCCCEEEEECC
VVQVSWNVENDGAIGDATADSSPWAREIEFLRPTTTNPTPDHVLPDNGVMTVDTKDMGIP
EEEEEEECCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCEEEECCCCCCCC
DGVSVELMPIFSICFDAQGVDIDCASDKVAGSAYIKSEPHRINMPTDDKGDVVARRAILD
CCCCEEEEEHHHHHCCCCCCEEECCCCCCCCCEEECCCCCEECCCCCCCCCHHHHHHHHH
EAKCRDCHSAEIRHKDNGLVACEACHTSDQGLQDDTVDGVKQFRGAGFAWKVHKASGHYM
HHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCC
NKKYGGSGTVMKTDCATCHVTDESGNVDGIELGRASEGRTYVFPTTKTDGTAMYASADAG
CCEECCCCCEEEECCCEEEEECCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEEECCCC
ACMTCHWGHESDAMLSHFKSNGGYYGPDKADAIKGTAEEACAVCHSPAKLMEVHNK
CEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA