| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963396
Identifier: 157963396
GI number: 157963396
Start: 4373668
End: 4375899
Strand: Direct
Name: 157963396
Synonym: Spea_3582
Alternate gene names: NA
Gene position: 4373668-4375899 (Clockwise)
Preceding gene: 157963387
Following gene: 157963401
Centisome position: 84.52
GC content: 47.63
Gene sequence:
>2232_bases ATGCGCAATGCATTGATTGCCGCCATCGCTCTATCTTCGGGGATGCTGCCATCAGCCGTAGCATTGGCTGATGAAGGACA GTGGCAACCCTATCAAATGCCATCCATCGCCGATAAGCTCAGCGAACGTGGCATCGATATTCCGGCTAAACAGTTAGCAG ACTTAACCAGCTACCCTATGAATGCTGTAGTCGGACTGGGCTATTGTACCGCCAGTTTTGTTTCGCCCCAAGGCTTAGTT GTGACAAACCATCATTGTGCCTATCGCGCCATTCAATATAACAGCAAAAAAGAGCATAACTATCTGGCAGATGGCTTTTT AGCGACCAGTAAAGATAAAGAACCGACAGCGGGGCCAAACGAGCGCCTTTATATCACCGAAGTGGTTACCGATGTATCAG AGCGAGTCAAAAAACAGATTGGTGACGATCCGCTTAAGCGTTATGAGAATATCCAAGCCAATCGCAAAGCCTTAATCAAA GAGTGCGAAAGCGATGATAACTATCGCTGCTCGGTAAGAAGCTTCCATAACGGTCTTGAGTATTACCTGATCAAGCAGCT CATTATTCGTGACGTGCGCTTAGTGTACGCGCCACCAGAAAGTGCAGGCGCCTTTGGTGGTGATATCGACAACTACGAAT ATCCACGCCACTCTGCTGATTTTACCTTTCTGCGTGCCTACGTTGGTAAAGACGGCAAACCAGCAGCTTTTGCTGAAGAC AACGTACCTTACGTGCCTAAGAGCTATTTAAAGATTAATGCCGACGGTGTAAAAGCCGGTGACGGTGTATTTGTGGCAGG CTACCCAGGTTCAACCAGCCGCTACCGCTTAACCAGCGAACTTAAGTTTGCTAGCGATTGGCTATATCCAACGCTTGCGA CGCGTTATCAGCTACGCATCGATACTATCGAAGCCATGAGCACAAACAATAAAGACGTTAAAATCAAGTACGCGGGCACG CTTGCTGGTATGGCAAACCGTATGAAGAAGTACAACGGTTTGTTAGATGGCTTTAAAGCGACTGATATAACGGGCATTAA GCAAAGCCGTGAGGATGATTTTAGCGCATGGCTTGCAAAAGACCCCGAGTACCAATCTTTCCAAACTCAATTTGATGAGC TTGAAACCCTGTTGGTCCAGCAACGCCAGCTACGCCAAGGCCGTTACTACTTTGAAAACGCCCAAAGCAGTGCACTGCTC GCTACCGCTAACAAGCTTTACCGCTTAGCCAAAGAGAAGCAAAAGAGCGATGCTGAACGTGAGGAGGGTTATCAAGAGCG CGACATGAAGATGTTTAAAGCGCGCCTTAAGCGTTTAGACTCGAGCTTTGCCATCAGCGTCGATAAAACCCTGTGGATGC AGGACTTAAAAGCCTACCTTGCCCAAGACAATCGCGTAGCAGAGCTTGATGCCATGCTCAATGAAGGTGATAGTGATAGT GATAGCGAGATCAGCCTGAGCGAAAAGCTTGATGCACTGTACGCGCTTAGCTCGCTAACAGAGAAAGACAAGCGTCTTGC CTGGATGAACGCCGATGCAGCAGAGTTTGAGACTAGCGCCGATCCATTTATCCGCCTTGCTGTTGCCCTGTACCCGCAAA ATATGCAGGCAGAGAAAGATGCTAAGACGTTAGCAGGTAAGCTATCCAAAGCTCGTCCTGACTATATGAAGGCCATTATC GCTTACAACAAGGCCAATGGCTGGCCAGTCTACCCTGATGCTAACGGTACGCTACGTATCACCTATGGTATGGTAGACGG TTACCAATCAACTGATGCGCTTTATAAGCAGCCCTTTACTCGCTTAGAAGGCATTGTAGCTAAGCATACTGGTGTAGAGC CGTTTAACGCGCCAACAAAACTACTAGAGGCGATTGAGGCTAAGCGTTTTGGTAGCCACGCGGTAGAAACCGTTTATCAA GATCCTGCTTCTTGGTTATGCCGCCTATTCTCTTGTTTAGATAAGCCTGAGAACTTTGGTTCAGTGCCTGTTAACTTCTT ATCGAGCGTTGACACCACTGGCGGTAACTCTGGCTCTCCAGTATTTAATGGAAAAGGCGAGCTAGTCGGCCTTAACTTTG ACTCGACTTACGAAGCAATTACTAAAGACTGGTTCTTTAATCCAACCATCACCCGCGCCGTACACGTGGATATTCGCTAT ATCCTCTGGATGATGGATGAGGTAGATAACGCACAAAATCTGATTGAAGAGCTAGACTTAGTGAACAACTAA
Upstream 100 bases:
>100_bases TAAGCAAAATGTGGTATAAAACCGTGGTAAAACAGAGCAGGCTTTTAACATCATACGACCTGCAACTAAAAATAAACTAT AACAATATTAAGGAAAGAAC
Downstream 100 bases:
>100_bases TTCGGCTAGGCGACATACTTAAAAGGCATATGAGTTCTGCTCATATGCCTTTTTACTTGAACAGCTACTCATGCTCTACC TTGCTACTTTTCCTCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MRNALIAAIALSSGMLPSAVALADEGQWQPYQMPSIADKLSERGIDIPAKQLADLTSYPMNAVVGLGYCTASFVSPQGLV VTNHHCAYRAIQYNSKKEHNYLADGFLATSKDKEPTAGPNERLYITEVVTDVSERVKKQIGDDPLKRYENIQANRKALIK ECESDDNYRCSVRSFHNGLEYYLIKQLIIRDVRLVYAPPESAGAFGGDIDNYEYPRHSADFTFLRAYVGKDGKPAAFAED NVPYVPKSYLKINADGVKAGDGVFVAGYPGSTSRYRLTSELKFASDWLYPTLATRYQLRIDTIEAMSTNNKDVKIKYAGT LAGMANRMKKYNGLLDGFKATDITGIKQSREDDFSAWLAKDPEYQSFQTQFDELETLLVQQRQLRQGRYYFENAQSSALL ATANKLYRLAKEKQKSDAEREEGYQERDMKMFKARLKRLDSSFAISVDKTLWMQDLKAYLAQDNRVAELDAMLNEGDSDS DSEISLSEKLDALYALSSLTEKDKRLAWMNADAAEFETSADPFIRLAVALYPQNMQAEKDAKTLAGKLSKARPDYMKAII AYNKANGWPVYPDANGTLRITYGMVDGYQSTDALYKQPFTRLEGIVAKHTGVEPFNAPTKLLEAIEAKRFGSHAVETVYQ DPASWLCRLFSCLDKPENFGSVPVNFLSSVDTTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRY ILWMMDEVDNAQNLIEELDLVNN
Sequences:
>Translated_743_residues MRNALIAAIALSSGMLPSAVALADEGQWQPYQMPSIADKLSERGIDIPAKQLADLTSYPMNAVVGLGYCTASFVSPQGLV VTNHHCAYRAIQYNSKKEHNYLADGFLATSKDKEPTAGPNERLYITEVVTDVSERVKKQIGDDPLKRYENIQANRKALIK ECESDDNYRCSVRSFHNGLEYYLIKQLIIRDVRLVYAPPESAGAFGGDIDNYEYPRHSADFTFLRAYVGKDGKPAAFAED NVPYVPKSYLKINADGVKAGDGVFVAGYPGSTSRYRLTSELKFASDWLYPTLATRYQLRIDTIEAMSTNNKDVKIKYAGT LAGMANRMKKYNGLLDGFKATDITGIKQSREDDFSAWLAKDPEYQSFQTQFDELETLLVQQRQLRQGRYYFENAQSSALL ATANKLYRLAKEKQKSDAEREEGYQERDMKMFKARLKRLDSSFAISVDKTLWMQDLKAYLAQDNRVAELDAMLNEGDSDS DSEISLSEKLDALYALSSLTEKDKRLAWMNADAAEFETSADPFIRLAVALYPQNMQAEKDAKTLAGKLSKARPDYMKAII AYNKANGWPVYPDANGTLRITYGMVDGYQSTDALYKQPFTRLEGIVAKHTGVEPFNAPTKLLEAIEAKRFGSHAVETVYQ DPASWLCRLFSCLDKPENFGSVPVNFLSSVDTTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRY ILWMMDEVDNAQNLIEELDLVNN >Mature_743_residues MRNALIAAIALSSGMLPSAVALADEGQWQPYQMPSIADKLSERGIDIPAKQLADLTSYPMNAVVGLGYCTASFVSPQGLV VTNHHCAYRAIQYNSKKEHNYLADGFLATSKDKEPTAGPNERLYITEVVTDVSERVKKQIGDDPLKRYENIQANRKALIK ECESDDNYRCSVRSFHNGLEYYLIKQLIIRDVRLVYAPPESAGAFGGDIDNYEYPRHSADFTFLRAYVGKDGKPAAFAED NVPYVPKSYLKINADGVKAGDGVFVAGYPGSTSRYRLTSELKFASDWLYPTLATRYQLRIDTIEAMSTNNKDVKIKYAGT LAGMANRMKKYNGLLDGFKATDITGIKQSREDDFSAWLAKDPEYQSFQTQFDELETLLVQQRQLRQGRYYFENAQSSALL ATANKLYRLAKEKQKSDAEREEGYQERDMKMFKARLKRLDSSFAISVDKTLWMQDLKAYLAQDNRVAELDAMLNEGDSDS DSEISLSEKLDALYALSSLTEKDKRLAWMNADAAEFETSADPFIRLAVALYPQNMQAEKDAKTLAGKLSKARPDYMKAII AYNKANGWPVYPDANGTLRITYGMVDGYQSTDALYKQPFTRLEGIVAKHTGVEPFNAPTKLLEAIEAKRFGSHAVETVYQ DPASWLCRLFSCLDKPENFGSVPVNFLSSVDTTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRY ILWMMDEVDNAQNLIEELDLVNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83309; Mature: 83309
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00673 V8_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNALIAAIALSSGMLPSAVALADEGQWQPYQMPSIADKLSERGIDIPAKQLADLTSYPM CCCCEEEHHHHHCCCCCHHHEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCH NAVVGLGYCTASFVSPQGLVVTNHHCAYRAIQYNSKKEHNYLADGFLATSKDKEPTAGPN HHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCHHHCCCEECCCCCCCCCCCC ERLYITEVVTDVSERVKKQIGDDPLKRYENIQANRKALIKECESDDNYRCSVRSFHNGLE CCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCHH YYLIKQLIIRDVRLVYAPPESAGAFGGDIDNYEYPRHSADFTFLRAYVGKDGKPAAFAED HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC NVPYVPKSYLKINADGVKAGDGVFVAGYPGSTSRYRLTSELKFASDWLYPTLATRYQLRI CCCCCCCCCEEEECCCEECCCCEEEEECCCCCCCEEEHHHHHHHHHHCCHHHHCEEEEEE DTIEAMSTNNKDVKIKYAGTLAGMANRMKKYNGLLDGFKATDITGIKQSREDDFSAWLAK EEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHCC DPEYQSFQTQFDELETLLVQQRQLRQGRYYFENAQSSALLATANKLYRLAKEKQKSDAER CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHH EEGYQERDMKMFKARLKRLDSSFAISVDKTLWMQDLKAYLAQDNRVAELDAMLNEGDSDS HCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC DSEISLSEKLDALYALSSLTEKDKRLAWMNADAAEFETSADPFIRLAVALYPQNMQAEKD CCCEEHHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCCHHHEEHHHHCCCCCCHHHH AKTLAGKLSKARPDYMKAIIAYNKANGWPVYPDANGTLRITYGMVDGYQSTDALYKQPFT HHHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCHHH RLEGIVAKHTGVEPFNAPTKLLEAIEAKRFGSHAVETVYQDPASWLCRLFSCLDKPENFG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCC SVPVNFLSSVDTTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRY CCCHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEEHHHHH ILWMMDEVDNAQNLIEELDLVNN HHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MRNALIAAIALSSGMLPSAVALADEGQWQPYQMPSIADKLSERGIDIPAKQLADLTSYPM CCCCEEEHHHHHCCCCCHHHEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCH NAVVGLGYCTASFVSPQGLVVTNHHCAYRAIQYNSKKEHNYLADGFLATSKDKEPTAGPN HHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCHHHCCCEECCCCCCCCCCCC ERLYITEVVTDVSERVKKQIGDDPLKRYENIQANRKALIKECESDDNYRCSVRSFHNGLE CCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCHH YYLIKQLIIRDVRLVYAPPESAGAFGGDIDNYEYPRHSADFTFLRAYVGKDGKPAAFAED HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC NVPYVPKSYLKINADGVKAGDGVFVAGYPGSTSRYRLTSELKFASDWLYPTLATRYQLRI CCCCCCCCCEEEECCCEECCCCEEEEECCCCCCCEEEHHHHHHHHHHCCHHHHCEEEEEE DTIEAMSTNNKDVKIKYAGTLAGMANRMKKYNGLLDGFKATDITGIKQSREDDFSAWLAK EEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHCC DPEYQSFQTQFDELETLLVQQRQLRQGRYYFENAQSSALLATANKLYRLAKEKQKSDAER CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHH EEGYQERDMKMFKARLKRLDSSFAISVDKTLWMQDLKAYLAQDNRVAELDAMLNEGDSDS HCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC DSEISLSEKLDALYALSSLTEKDKRLAWMNADAAEFETSADPFIRLAVALYPQNMQAEKD CCCEEHHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCCHHHEEHHHHCCCCCCHHHH AKTLAGKLSKARPDYMKAIIAYNKANGWPVYPDANGTLRITYGMVDGYQSTDALYKQPFT HHHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCHHH RLEGIVAKHTGVEPFNAPTKLLEAIEAKRFGSHAVETVYQDPASWLCRLFSCLDKPENFG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCC SVPVNFLSSVDTTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRY CCCHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEEHHHHH ILWMMDEVDNAQNLIEELDLVNN HHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA