| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963316
Identifier: 157963316
GI number: 157963316
Start: 4281835
End: 4282308
Strand: Direct
Name: 157963316
Synonym: Spea_3502
Alternate gene names: NA
Gene position: 4281835-4282308 (Clockwise)
Preceding gene: 157963315
Following gene: 157963319
Centisome position: 82.75
GC content: 44.09
Gene sequence:
>474_bases ATGACATTGTCTAACCGTTTATCTCTTAGCTTGTGGAGTGATTGCGACCCCCTCTATATGCAGCATCAGAGTCTGTGTTT ACAATTGCAAGATGACCACCAGCTCAATGTCAATTTGCTGCTATTAGCCCTTTGGCTCGATATGCATCACTACTTACTGC CCAAGCTACAATGGCGTCAACTACAGCAAGACACTCACAGCTGGGAAAGGAAGCTGTTACTGCCCTACAGACAATTAAGA CGCCAAAGCAAAGCCTGTCTTGCAACAGGCGAATACCGACAGATGTTAGAGCTAGAGCTGATGTTGGAGCGAAAATCTCA GGCGATGATTTTAACTGCACTCAAACTTATGCCGCTAGAAGAGCAAACAAGCACTAGTACTAATATAAGTAGTTACCATA ACCTCAGCCATTATTTAGCCCTGTTTAATTTAGATAGCCGCAATTACCCCTCATTGCAGAGCGCTTCACAATAG
Upstream 100 bases:
>100_bases GCCAAAGTTTTAGGCTGAATTAGACAAATGGGGAGCACGGCTCCCCATTTTGTTATCATGGCTTAATAATGAGTGAAACG ATAATCAGAAGGTTCACCCT
Downstream 100 bases:
>100_bases AAAAGCCAGCCCTAGCTTTTCTTCGCGTCCTCCGTGTAGCAAACCAAGTGAGCACTTCATGGTTTATCGCTTTTAAAGCA AAGAACTCAGTTTGTGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTLSNRLSLSLWSDCDPLYMQHQSLCLQLQDDHQLNVNLLLLALWLDMHHYLLPKLQWRQLQQDTHSWERKLLLPYRQLR RQSKACLATGEYRQMLELELMLERKSQAMILTALKLMPLEEQTSTSTNISSYHNLSHYLALFNLDSRNYPSLQSASQ
Sequences:
>Translated_157_residues MTLSNRLSLSLWSDCDPLYMQHQSLCLQLQDDHQLNVNLLLLALWLDMHHYLLPKLQWRQLQQDTHSWERKLLLPYRQLR RQSKACLATGEYRQMLELELMLERKSQAMILTALKLMPLEEQTSTSTNISSYHNLSHYLALFNLDSRNYPSLQSASQ >Mature_156_residues TLSNRLSLSLWSDCDPLYMQHQSLCLQLQDDHQLNVNLLLLALWLDMHHYLLPKLQWRQLQQDTHSWERKLLLPYRQLRR QSKACLATGEYRQMLELELMLERKSQAMILTALKLMPLEEQTSTSTNISSYHNLSHYLALFNLDSRNYPSLQSASQ
Specific function: Unknown
COG id: COG5589
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18586; Mature: 18455
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSNRLSLSLWSDCDPLYMQHQSLCLQLQDDHQLNVNLLLLALWLDMHHYLLPKLQWRQ CCCCCCCEEEECCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH LQQDTHSWERKLLLPYRQLRRQSKACLATGEYRQMLELELMLERKSQAMILTALKLMPLE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC EQTSTSTNISSYHNLSHYLALFNLDSRNYPSLQSASQ CCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCC >Mature Secondary Structure TLSNRLSLSLWSDCDPLYMQHQSLCLQLQDDHQLNVNLLLLALWLDMHHYLLPKLQWRQ CCCCCCEEEECCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH LQQDTHSWERKLLLPYRQLRRQSKACLATGEYRQMLELELMLERKSQAMILTALKLMPLE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC EQTSTSTNISSYHNLSHYLALFNLDSRNYPSLQSASQ CCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA