| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yheT [H]
Identifier: 157963319
GI number: 157963319
Start: 4284889
End: 4285869
Strand: Direct
Name: yheT [H]
Synonym: Spea_3505
Alternate gene names: 157963319
Gene position: 4284889-4285869 (Clockwise)
Preceding gene: 157963316
Following gene: 157963320
Centisome position: 82.81
GC content: 47.81
Gene sequence:
>981_bases ATGAGCCAGATATTTTCTCCCCCTTGGTGGGCTAAAAACCCCCATATTCAAACGATTCTTCCGGTACTGACCAAAGTGGA CAAACCACAGCTGCGACGTGAGAGGTTGGAACTCAGCGATGGTGATTTTATCGATCTAGACTGGCAAGGTTCGCCTAAAG ACAATCAGCCAATACTGGTGATCATCCACGGCTTGGAGGGTAGCGCTCAATCCCATTACGCTCGTCGTATGTTAGCCGCC TGTAAGGCACTAGACTTATGCGCTGTGGTGCATCACCACCGTAGCTGTTCAGGTGAGCTCAATCGACTCGTTAGGGGTTA TCACAGTGGCGATACTCAAGATTTGCAAACCAGCTTGAGTCACTTAAAGACCCAGTACCCCGGCAGTCGCCTACTTGCGG CAGGCTATAGCCTAGGTGGCAATGTGCTGGTCAAATATCAAGGCGAGCAACAAGAACGTAGCCTAATTGATAGAGGCGTT GCCATCTCGGCACCACTGCAACTCGGTTCCTGTGCCAATAGATTAGAGAAAGGCTTCTCTAAAGTTTACCAAAGCTATCT AATTAAACAGTTACAAGAAAAAATGCGTGGAAAGATAGCGAGGCCAGAGCTGCAAGCCTTAATGCCAATAAGTAAGAGGG ATATTGAGCAGCTCACCACCTTTTATCTATTCGACGATAAGATCACCGCGCCGCTACATGGCTTTACCGATGTCGATGAC TATTACACCCGCGCCAGTGGCTTGCCTTACTTAAGTCAGATCACTAAACCGACCTTAGTGATCCACGCTAAAGATGATCC CTTTATGACTCATGCGGTGATCCCGACGCCACTGCAGCTGTCGGCTCAAGTGCAATATGAACTGCACGATAATGGTGGTC ATGTGGGCTTTATCGAAGGTGGTAGCCCTTGGCGTCCGCAGTATTATCTTGAAAAACGTGTATTAAACTTTTTAACCTCA ATGGAAACATCAGTATGTTAG
Upstream 100 bases:
>100_bases GGAAACAAAGCGAATAAAAGACCAGTTTAAAATCTATGTTACACTCTGCTGACAATAACAATTAAACACACGTTTTAATT TTCAGCAATAGCCAATTATT
Downstream 100 bases:
>100_bases TGCCTTATGAGTCTTTAACCCAGTTACCTAGCGACACTTTTGACAACCTAGTTAAAGAGTATCTGATTAGCCAAGTCGAA GATGGCAGTTTTTCTGGCGA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSQIFSPPWWAKNPHIQTILPVLTKVDKPQLRRERLELSDGDFIDLDWQGSPKDNQPILVIIHGLEGSAQSHYARRMLAA CKALDLCAVVHHHRSCSGELNRLVRGYHSGDTQDLQTSLSHLKTQYPGSRLLAAGYSLGGNVLVKYQGEQQERSLIDRGV AISAPLQLGSCANRLEKGFSKVYQSYLIKQLQEKMRGKIARPELQALMPISKRDIEQLTTFYLFDDKITAPLHGFTDVDD YYTRASGLPYLSQITKPTLVIHAKDDPFMTHAVIPTPLQLSAQVQYELHDNGGHVGFIEGGSPWRPQYYLEKRVLNFLTS METSVC
Sequences:
>Translated_326_residues MSQIFSPPWWAKNPHIQTILPVLTKVDKPQLRRERLELSDGDFIDLDWQGSPKDNQPILVIIHGLEGSAQSHYARRMLAA CKALDLCAVVHHHRSCSGELNRLVRGYHSGDTQDLQTSLSHLKTQYPGSRLLAAGYSLGGNVLVKYQGEQQERSLIDRGV AISAPLQLGSCANRLEKGFSKVYQSYLIKQLQEKMRGKIARPELQALMPISKRDIEQLTTFYLFDDKITAPLHGFTDVDD YYTRASGLPYLSQITKPTLVIHAKDDPFMTHAVIPTPLQLSAQVQYELHDNGGHVGFIEGGSPWRPQYYLEKRVLNFLTS METSVC >Mature_325_residues SQIFSPPWWAKNPHIQTILPVLTKVDKPQLRRERLELSDGDFIDLDWQGSPKDNQPILVIIHGLEGSAQSHYARRMLAAC KALDLCAVVHHHRSCSGELNRLVRGYHSGDTQDLQTSLSHLKTQYPGSRLLAAGYSLGGNVLVKYQGEQQERSLIDRGVA ISAPLQLGSCANRLEKGFSKVYQSYLIKQLQEKMRGKIARPELQALMPISKRDIEQLTTFYLFDDKITAPLHGFTDVDDY YTRASGLPYLSQITKPTLVIHAKDDPFMTHAVIPTPLQLSAQVQYELHDNGGHVGFIEGGSPWRPQYYLEKRVLNFLTSM ETSVC
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=331, Percent_Identity=27.190332326284, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI194578891, Length=327, Percent_Identity=27.82874617737, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI23397659, Length=346, Percent_Identity=24.8554913294798, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI23397661, Length=346, Percent_Identity=24.8554913294798, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI269315865, Length=304, Percent_Identity=25, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1789752, Length=318, Percent_Identity=44.3396226415094, Blast_Score=256, Evalue=1e-69, Organism=Caenorhabditis elegans, GI17566110, Length=312, Percent_Identity=26.6025641025641, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71985405, Length=312, Percent_Identity=26.2820512820513, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71985413, Length=203, Percent_Identity=26.1083743842365, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323866, Length=260, Percent_Identity=26.5384615384615, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6325162, Length=300, Percent_Identity=26, Blast_Score=97, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6319655, Length=293, Percent_Identity=24.2320819112628, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI281398151, Length=329, Percent_Identity=28.2674772036474, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24652003, Length=329, Percent_Identity=28.2674772036474, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24581365, Length=336, Percent_Identity=27.3809523809524, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 36739; Mature: 36608
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS01133 UPF0017
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIFSPPWWAKNPHIQTILPVLTKVDKPQLRRERLELSDGDFIDLDWQGSPKDNQPILV CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEE IIHGLEGSAQSHYARRMLAACKALDLCAVVHHHRSCSGELNRLVRGYHSGDTQDLQTSLS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH HLKTQYPGSRLLAAGYSLGGNVLVKYQGEQQERSLIDRGVAISAPLQLGSCANRLEKGFS HHHHCCCCCCEEEECCCCCCCEEEEECCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH KVYQSYLIKQLQEKMRGKIARPELQALMPISKRDIEQLTTFYLFDDKITAPLHGFTDVDD HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHH YYTRASGLPYLSQITKPTLVIHAKDDPFMTHAVIPTPLQLSAQVQYELHDNGGHVGFIEG HHHHHCCCCHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEEEECCCCEEEEECC GSPWRPQYYLEKRVLNFLTSMETSVC CCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQIFSPPWWAKNPHIQTILPVLTKVDKPQLRRERLELSDGDFIDLDWQGSPKDNQPILV CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEE IIHGLEGSAQSHYARRMLAACKALDLCAVVHHHRSCSGELNRLVRGYHSGDTQDLQTSLS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH HLKTQYPGSRLLAAGYSLGGNVLVKYQGEQQERSLIDRGVAISAPLQLGSCANRLEKGFS HHHHCCCCCCEEEECCCCCCCEEEEECCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH KVYQSYLIKQLQEKMRGKIARPELQALMPISKRDIEQLTTFYLFDDKITAPLHGFTDVDD HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHH YYTRASGLPYLSQITKPTLVIHAKDDPFMTHAVIPTPLQLSAQVQYELHDNGGHVGFIEG HHHHHCCCCHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEEEECCCCEEEEECC GSPWRPQYYLEKRVLNFLTSMETSVC CCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]