| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963288
Identifier: 157963288
GI number: 157963288
Start: 4244682
End: 4244936
Strand: Direct
Name: 157963288
Synonym: Spea_3474
Alternate gene names: NA
Gene position: 4244682-4244936 (Clockwise)
Preceding gene: 157963283
Following gene: 157963292
Centisome position: 82.03
GC content: 35.29
Gene sequence:
>255_bases ATGCAAAAAAATAACTTTGATTACGATAAAGCCATAAAAAACATAACTTATTTTGAGATTCTTGTCGGAATATCACTAGC AATAGATATTGTATTTAAATTTTACGGAGCATCAAAAGGCATACTTAGCTGTGGTGCAGAACCATCACTGACTTGGCTCA CCTTTGCAGCTCTCGGTAGGCTAATAGGACATAGCGCTAAGAGCATTCTTCAAGCATTAAAATCGAATAGTGAAAATAAT AGGGAGCAAAACTGA
Upstream 100 bases:
>100_bases TGTCATTAACGGAATACGTACAATACGCTTCTCTTAATACCGCTTGTTTATCTTATTGGATTTAGATTCGACTCCGCTTT CGAGGCGCTAAAGGCTAACT
Downstream 100 bases:
>100_bases GTCAAAAACTAACAGAAAACACCTGTTCCCCATCGGAGTTGCCGAAGTACGTTGGAATAAATCGCGTGATGCCGACAGGG ATGTCGGCGTAGCTTTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MQKNNFDYDKAIKNITYFEILVGISLAIDIVFKFYGASKGILSCGAEPSLTWLTFAALGRLIGHSAKSILQALKSNSENN REQN
Sequences:
>Translated_84_residues MQKNNFDYDKAIKNITYFEILVGISLAIDIVFKFYGASKGILSCGAEPSLTWLTFAALGRLIGHSAKSILQALKSNSENN REQN >Mature_84_residues MQKNNFDYDKAIKNITYFEILVGISLAIDIVFKFYGASKGILSCGAEPSLTWLTFAALGRLIGHSAKSILQALKSNSENN REQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9299; Mature: 9299
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKNNFDYDKAIKNITYFEILVGISLAIDIVFKFYGASKGILSCGAEPSLTWLTFAALGR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHH LIGHSAKSILQALKSNSENNREQN HHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQKNNFDYDKAIKNITYFEILVGISLAIDIVFKFYGASKGILSCGAEPSLTWLTFAALGR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHH LIGHSAKSILQALKSNSENNREQN HHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA