| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963283
Identifier: 157963283
GI number: 157963283
Start: 4239880
End: 4240752
Strand: Direct
Name: 157963283
Synonym: Spea_3469
Alternate gene names: NA
Gene position: 4239880-4240752 (Clockwise)
Preceding gene: 157963282
Following gene: 157963288
Centisome position: 81.94
GC content: 43.07
Gene sequence:
>873_bases ATGCTGCTTGGGCTTTCTATGACAGAAAGCTCAGCGCATCAAGCCGAGTTAACACTAAGTCCTACGACTAAAGCTACAAC TACAACAACTACAACTACAACAAAAAGAGAATTAACAGTGAGCCAGCCACATACCCTTACATTAGATGACGTCTCATTTG ATAAAAAACAAGGCAGGATTGATGTTTACAAGGGCAAGCATAAACATATCATCATCCCTGATAATTTTGACGGTATCCCC GTCACCAAGATCTGGGATTATGCTTTTTCAGAGGTTGAGGAGTTAAGCGAAGAATTCGAAGAGGTCCCAGAGAACCTAAT AGCCAGCGTGGTTATCCCTAATACAGTCACCGAAATTGGTGAAGGCGCATTTCAGCGTAACGCCCTTACCGAGGTAGTGA TCCCAAGTTCTGTGACTCGTATTGGTTACAAGGCCTTTGCTGAAAACGCACTTACCAGCGTGGACATCCCAGATTCAGTG ACTGAAATTGCAGAAAGAGCATTTGCCAAAAATGCATTAACTCAGCTGAGCCTGCCAAATGCATTGACTAAAATTAATGA TCGAGTGTTTCAATTTAATGCGTTAACCAGCATCACTATTCCTGATTCCGTGACTGAAATCGGTTTAGGCGCATTTAGGG GGAATGAACTTCAAAGCATCACAATTCCTGACTCTGTAACTGACATAGGTTCAGAAGCGTTTGCAGATAATGTCATAACC AATGTATTCATTCCGACTTCGGTCACTTACATGGGTAATGACGCTTTTACCGGTAACCCATTAAGGGGCAGGATTATCAA AGGCTTTGGCAACAAAAAGCCGCCCAAAGAACTCACTGACGAAGAGTGGCTCGAAGCCTATGGTGACTTATAA
Upstream 100 bases:
>100_bases TAGATGCCATGCCAAATTTGGATTGGATGGAAGACTGATTTTTAAAATCAATCGCTTTAGCAGCAACTTATCTCACAGGT TAAGTGCTGCTCTAGTTACC
Downstream 100 bases:
>100_bases GCTAAAGCATTGCTGCGCGCACATCTAACATCTGATAGCGCGTAACCTTGTGAGCTTACTGCTCACAAGGTTTACAGCAG AGAAGTAACTGTCCCCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Surface Leucine-Rich Repeat-Containing Protein; Surface Antigen BspA; Fibronectin Type III Domain-Containing Protein; Surface Protein; TPR Repeat-Containing Protein; Adhesion Exoprotein; Ig Domain-Containing Domain-Containing Protein; Ig Domain Domain Protein; Subtilisin-Like Serine Protease; Type 1 Dockerin; Surface Antigen BspA-Like Protein; Peptidoglycan Bound Protein; Surface Antigen BspA Like Protein; Fibronectin Type III Domain Protein; Leucine-Rich Repeat-Containing Protein; Leucine Rich Repeat Domain Protein; N-Acetylmuramoyl-L-Alanine Amidase; Ig Domain Protein; Cell Surface Antigen; Secreted Protein; Lipoprotein
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MLLGLSMTESSAHQAELTLSPTTKATTTTTTTTTKRELTVSQPHTLTLDDVSFDKKQGRIDVYKGKHKHIIIPDNFDGIP VTKIWDYAFSEVEELSEEFEEVPENLIASVVIPNTVTEIGEGAFQRNALTEVVIPSSVTRIGYKAFAENALTSVDIPDSV TEIAERAFAKNALTQLSLPNALTKINDRVFQFNALTSITIPDSVTEIGLGAFRGNELQSITIPDSVTDIGSEAFADNVIT NVFIPTSVTYMGNDAFTGNPLRGRIIKGFGNKKPPKELTDEEWLEAYGDL
Sequences:
>Translated_290_residues MLLGLSMTESSAHQAELTLSPTTKATTTTTTTTTKRELTVSQPHTLTLDDVSFDKKQGRIDVYKGKHKHIIIPDNFDGIP VTKIWDYAFSEVEELSEEFEEVPENLIASVVIPNTVTEIGEGAFQRNALTEVVIPSSVTRIGYKAFAENALTSVDIPDSV TEIAERAFAKNALTQLSLPNALTKINDRVFQFNALTSITIPDSVTEIGLGAFRGNELQSITIPDSVTDIGSEAFADNVIT NVFIPTSVTYMGNDAFTGNPLRGRIIKGFGNKKPPKELTDEEWLEAYGDL >Mature_290_residues MLLGLSMTESSAHQAELTLSPTTKATTTTTTTTTKRELTVSQPHTLTLDDVSFDKKQGRIDVYKGKHKHIIIPDNFDGIP VTKIWDYAFSEVEELSEEFEEVPENLIASVVIPNTVTEIGEGAFQRNALTEVVIPSSVTRIGYKAFAENALTSVDIPDSV TEIAERAFAKNALTQLSLPNALTKINDRVFQFNALTSITIPDSVTEIGLGAFRGNELQSITIPDSVTDIGSEAFADNVIT NVFIPTSVTYMGNDAFTGNPLRGRIIKGFGNKKPPKELTDEEWLEAYGDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31702; Mature: 31702
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGLSMTESSAHQAELTLSPTTKATTTTTTTTTKRELTVSQPHTLTLDDVSFDKKQGRI CEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCCCCCCE DVYKGKHKHIIIPDNFDGIPVTKIWDYAFSEVEELSEEFEEVPENLIASVVIPNTVTEIG EEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EGAFQRNALTEVVIPSSVTRIGYKAFAENALTSVDIPDSVTEIAERAFAKNALTQLSLPN CCHHHHCCHHEEECCCHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHCCCH ALTKINDRVFQFNALTSITIPDSVTEIGLGAFRGNELQSITIPDSVTDIGSEAFADNVIT HHHHHHHHEEEEECEEEEECCCCHHHHCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHH NVFIPTSVTYMGNDAFTGNPLRGRIIKGFGNKKPPKELTDEEWLEAYGDL EEEECCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MLLGLSMTESSAHQAELTLSPTTKATTTTTTTTTKRELTVSQPHTLTLDDVSFDKKQGRI CEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCCCCCCE DVYKGKHKHIIIPDNFDGIPVTKIWDYAFSEVEELSEEFEEVPENLIASVVIPNTVTEIG EEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EGAFQRNALTEVVIPSSVTRIGYKAFAENALTSVDIPDSVTEIAERAFAKNALTQLSLPN CCHHHHCCHHEEECCCHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHCCCH ALTKINDRVFQFNALTSITIPDSVTEIGLGAFRGNELQSITIPDSVTDIGSEAFADNVIT HHHHHHHHEEEEECEEEEECCCCHHHHCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHH NVFIPTSVTYMGNDAFTGNPLRGRIIKGFGNKKPPKELTDEEWLEAYGDL EEEECCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA