Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963241

Identifier: 157963241

GI number: 157963241

Start: 4189078

End: 4190148

Strand: Direct

Name: 157963241

Synonym: Spea_3427

Alternate gene names: NA

Gene position: 4189078-4190148 (Clockwise)

Preceding gene: 157963236

Following gene: 157963244

Centisome position: 80.95

GC content: 45.0

Gene sequence:

>1071_bases
ATGACTCCTGAAATCATGGCAATGGCCAAAGATACTGCCGGCATGTTTCTATTTCTCGCGGCTGAATTAACTCTGCTGTT
TCTAGCGATTAGTTATATTGTCGGCATACTACAAGAATACATTCCGCCTGAAAAAATCCAGTCGATTCTGAGTTCGAAGA
AAGGCAAAGGCTATATTATTGCGGCCCTACTCGGCGCTATAACACCATTCTGCTCATGCTCAACGATTCCTTTCTTGAAA
GGCTTATTAAGAGCTAAAGCAGGCTTCGGCCCTATGATGGTATTCCTGTTCTCTAGCCCGCTATTGAACCCAATTATCAT
AGGCCTGTTTATCGTGACCTTCGGTTTTAAAGTGGCACTGTTTTACTTCGCCGTTGCTATGGTTGTTTCAGTCACTGCGG
GTTATGTGCTGGAGAAACTAGGATTTGAGCGTTACGTTAAGCCTGAAGCTTATGAAGCAGCTGATAGCGCTAGTTGTGGT
ACTAGCTGTGGCGATAGTGCAAAAGTAGAAGCGAAAGCTGAAACGAGTTGCTGCACTGCGCCAAATAAAGAAGTGGCTCC
AATTGCGAACACAAGCTGCTGCTCAGCTCCTGCCGAACCAGTTAGCTGCTGTGGTACAGCAACAAGCACTTGTGGCTCAA
CAGCAGTCGTAAAGGAAGACAGCCGTTGGATGCGTGTATGGCGAGCAACCTGGAAAGACTTTAAACAAGTTCTGCCTTAC
TTAATGCTGGGTATTTTGCTTGGATCATTTATCTATGGCTTTATACCAACAGATCTAATCGCTAAATATGCGGGTGAAGG
CACCTGGTATGCGATCCCGATTGCAGCTGTAATTGGTATCCCACTGTACATTCGTGCAGAAGCGGTTATCCCATTAAGCT
CAGCGTTAGTGGCTAAAGGTATGGCGTTAGGTTCAGTTATGGCACTGATTATTGGTAGTGCGGGCGCAAGTTTAACGGAA
GTGATCTTGCTGAAATCTATCTTTAAGAATCAGATGATTGCCGCATTCTTAGCTGTCATCTTAGGTATGGCGATTACTGC
AGGTTATCTATACACAGTTCTTTTTGCCTAA

Upstream 100 bases:

>100_bases
AATAATGGTTGACTATTTTATGAATCGGACTATTATCTCTGCAAATTCGTTATTTCGATAAAACCAGAAATAACAAACAA
AGCTTATTAAGGTAAATATT

Downstream 100 bases:

>100_bases
GTCTATAGTATCTCCTAACAACTAGCTTGCGAACATGCTTAATGCTCGCAAGCTCCCTTAACACTTATTTGAATTTACTA
TTAACACAGTCAATCACACA

Product: permease

Products: NA

Alternate protein names: Permease Family Protein; Permease Superfamily; Permease-Like Protein; Integral Membrane Protein

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYIIAALLGAITPFCSCSTIPFLK
GLLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVALFYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCG
TSCGDSAKVEAKAETSCCTAPNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPY
LMLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKGMALGSVMALIIGSAGASLTE
VILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA

Sequences:

>Translated_356_residues
MTPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYIIAALLGAITPFCSCSTIPFLK
GLLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVALFYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCG
TSCGDSAKVEAKAETSCCTAPNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPY
LMLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKGMALGSVMALIIGSAGASLTE
VILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA
>Mature_355_residues
TPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYIIAALLGAITPFCSCSTIPFLKG
LLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVALFYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCGT
SCGDSAKVEAKAETSCCTAPNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPYL
MLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKGMALGSVMALIIGSAGASLTEV
ILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37773; Mature: 37642

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHH
AALLGAITPFCSCSTIPFLKGLLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVAL
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCGTSCGDSAKVEAKAETSCCTA
HHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCC
PNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPY
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
LMLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHEEEEECCCHHHHHHHHH
MALGSVMALIIGSAGASLTEVILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPEIMAMAKDTAGMFLFLAAELTLLFLAISYIVGILQEYIPPEKIQSILSSKKGKGYII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHH
AALLGAITPFCSCSTIPFLKGLLRAKAGFGPMMVFLFSSPLLNPIIIGLFIVTFGFKVAL
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FYFAVAMVVSVTAGYVLEKLGFERYVKPEAYEAADSASCGTSCGDSAKVEAKAETSCCTA
HHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCCC
PNKEVAPIANTSCCSAPAEPVSCCGTATSTCGSTAVVKEDSRWMRVWRATWKDFKQVLPY
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
LMLGILLGSFIYGFIPTDLIAKYAGEGTWYAIPIAAVIGIPLYIRAEAVIPLSSALVAKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCHHEEEEECCCHHHHHHHHH
MALGSVMALIIGSAGASLTEVILLKSIFKNQMIAAFLAVILGMAITAGYLYTVLFA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA