| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963204
Identifier: 157963204
GI number: 157963204
Start: 4142944
End: 4143585
Strand: Direct
Name: 157963204
Synonym: Spea_3389
Alternate gene names: NA
Gene position: 4142944-4143585 (Clockwise)
Preceding gene: 157963199
Following gene: 157963205
Centisome position: 80.06
GC content: 40.19
Gene sequence:
>642_bases GTGAGTCTGGAAGTTAAGCTCAAGATGACAAGGCGACTATGGTGGCTATTCCTATTTTTATCGGTAACGCTATTCTCCTT ACCGTCAAGCAGTCAGAACCTACCTGACGCCGCTTTTTTAAAAAGTGAAATAACCCGACTGAATAGTGAATCGCCAAAAA ATGAAACCTTAATCAACCAATATGAAACTTTGCTGTCTCGAATTAATGGCTATGAAAAACAAACTGCCACGCGAGAAAAG TATCTAAACATTGTTAGCCAGTTTCCGGTACAACGAGAGCGATTACTCAAAAAGATAGATGATGTTGAGCAGTTAGATAT CTTTAATATTCGCCGTAAAGATAAGTACAGTGACCTTTCTCAATCTATCGCGACACTGCAAGCTGCGCTAATAGAGTGGC GTTCTACATATCAAACCAATAGCGATCAAAATAAGCGACTGATTAATGAGAAAACAACATTACCCCAGTCTCTCGCACAA ACGGATAAAGAAATCGAGCAAGCCTCTATCATTAAAAGTGATACTGCCAGTCAGTTAGATCAGTGGCTTGAATCAACCCA CTTAACCTCGCTAAAACTTCAACGACAAGTGACCTCTGCTCAGTTACAGAGCTTAGATGAACGCACTGAATTACTGATTT AG
Upstream 100 bases:
>100_bases TACAGTTGCATATTCTCACTACAACCATGTTTCAGGCCAATTGCCAATAAACCGTATACACTTATATCTATGGATAAGAC CGTGAAAGTGGGGAAAGCCT
Downstream 100 bases:
>100_bases AGCAGCAATTACTGAACCAAAAAATTCAATTAGCCTCGCCAATTTTGATTGAATTACAAGATAAATTAACCCGAGTCGAG CAGGCCTCAGTTAAAACACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSLEVKLKMTRRLWWLFLFLSVTLFSLPSSSQNLPDAAFLKSEITRLNSESPKNETLINQYETLLSRINGYEKQTATREK YLNIVSQFPVQRERLLKKIDDVEQLDIFNIRRKDKYSDLSQSIATLQAALIEWRSTYQTNSDQNKRLINEKTTLPQSLAQ TDKEIEQASIIKSDTASQLDQWLESTHLTSLKLQRQVTSAQLQSLDERTELLI
Sequences:
>Translated_213_residues MSLEVKLKMTRRLWWLFLFLSVTLFSLPSSSQNLPDAAFLKSEITRLNSESPKNETLINQYETLLSRINGYEKQTATREK YLNIVSQFPVQRERLLKKIDDVEQLDIFNIRRKDKYSDLSQSIATLQAALIEWRSTYQTNSDQNKRLINEKTTLPQSLAQ TDKEIEQASIIKSDTASQLDQWLESTHLTSLKLQRQVTSAQLQSLDERTELLI >Mature_212_residues SLEVKLKMTRRLWWLFLFLSVTLFSLPSSSQNLPDAAFLKSEITRLNSESPKNETLINQYETLLSRINGYEKQTATREKY LNIVSQFPVQRERLLKKIDDVEQLDIFNIRRKDKYSDLSQSIATLQAALIEWRSTYQTNSDQNKRLINEKTTLPQSLAQT DKEIEQASIIKSDTASQLDQWLESTHLTSLKLQRQVTSAQLQSLDERTELLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24798; Mature: 24667
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEVKLKMTRRLWWLFLFLSVTLFSLPSSSQNLPDAAFLKSEITRLNSESPKNETLINQ CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH YETLLSRINGYEKQTATREKYLNIVSQFPVQRERLLKKIDDVEQLDIFNIRRKDKYSDLS HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QSIATLQAALIEWRSTYQTNSDQNKRLINEKTTLPQSLAQTDKEIEQASIIKSDTASQLD HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QWLESTHLTSLKLQRQVTSAQLQSLDERTELLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLEVKLKMTRRLWWLFLFLSVTLFSLPSSSQNLPDAAFLKSEITRLNSESPKNETLINQ CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH YETLLSRINGYEKQTATREKYLNIVSQFPVQRERLLKKIDDVEQLDIFNIRRKDKYSDLS HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QSIATLQAALIEWRSTYQTNSDQNKRLINEKTTLPQSLAQTDKEIEQASIIKSDTASQLD HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH QWLESTHLTSLKLQRQVTSAQLQSLDERTELLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA