| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is maeA [H]
Identifier: 157963003
GI number: 157963003
Start: 3905579
End: 3907267
Strand: Direct
Name: maeA [H]
Synonym: Spea_3186
Alternate gene names: 157963003
Gene position: 3905579-3907267 (Clockwise)
Preceding gene: 157963002
Following gene: 157963009
Centisome position: 75.48
GC content: 49.26
Gene sequence:
>1689_bases ATGGACGATAACAAACGCCCGCTCTATCTTCCTTTTGCCGGTCCAGCCATTCTTGAAGCACCTTTGATCAACAAAGGTAG CGCTTTCACCGACGAAGAACGGATATTTTTTAATCTCGAAGGCCTACTGCCCCACGTCATCGAGACCATCGAAGAGCAAG CCTCTCGCGCTTATGATCAATACAAGAACTTCAGCAACGATCTCGACAAACATATCTACCTAAGAAACATTCAAGACACC AACGAGACTCTCTATTATCGCCTGGTGCAAAACCACATTACCGAGATGATGCCTATCATCTACACCCCTACAGTGGGGAT GGCCTGTGAGCGTTTCTCTAAAGATTACCGTCGTAACCGTGGCCTGTTTATCTCTTACGCCAATAAAGACCGTATCGACG ATATTCTTAATAACTCAACCCGCCAAAAAGTAAAAATCATCGTAGTGACCGACGGTGAGCGCATCTTAGGTCTAGGTGAT CAAGGCATTGGTGGTATGGGGATCCCGATTGGTAAGTTATCTCTATACACCAGCTGTGGCGGTATTAGCCCGGCTTACAC CTTGCCGATTACACTCGATGTAGGAACCGATAACCCACACCTACTCGAAGACCCTATGTACATGGGGATGCGTAGCCCAC GTATTGGCGGCGAAGAATACACAGAATTTGTAGAAGCCTTTATGCAAGCGGTTCACCGCCGCTGGCCCGACGCACTGATC CAGTTCGAAGACTTTGCTCAGAAGAACGCCATGCCACTGCTTGAGCGTTATAAAGATCAATACTGCTGCTTTAATGATGA CATTCAAGGCACTGCCGCAGTAACTGTTGGCTCACTGTTAGCAGCCTGTAAGGCGGCAAAAACACAGCTTAGCGAACAGC GCATCACCTTCTTAGGTGCAGGCTCAGCCGGTTGTGGTATTGCCGAGGCTATCGTGGCGCAGATGGTGTCTGAAGGGATT AGTGAAGCACAGGCACGCAAGCAAGTGTTTATGGTTGATCGCTGGGGCATGTTGCAATCAAATATGCCTAACTTGCTACC GTTCCAGCAAAAGTTAGCGCAAAATTGTGATGACATTACCAGCTGGGATAATTTCAGCGACAACATCTCACTGCTGGATG TGGTAAACAATGCCAAGCCAACGGTATTGATTGGCGTTTCAGGCGCGCCGGGTCTGTTCACCGAAGAGATCATCAAGGCG ATGCACAGCCATTGTAAGCGCCCAATCGTGTTCCCGTTGTCGAACCCAACTAGCCGCGTTGAAGCCACGCCGAAAGATAT CCTACACTGGACCCAAGGCCAGGCGCTTGTAGCAACAGGTAGCCCGTTTGAGCCAGTAGTGGTTGACGATGTGACCTATG AAATTGCCCAGTGTAATAACAGTTATATCTTCCCAGGTATTGGCCTTGGCGTATTAGCCTCTGGGGCAAAACGTGTCAGC GACGCCATGTTGATGGCATCGAGCCGCGCGTTAGCCGAGTGTTCACCACTGGCGATTGACGGTGAAGGCTCACTGCTGCC AAAGCTTGAAGATATTCATAAGGTGAGTAAGCATATTGCGTTTGCCGTTGCCAGAACTGCAATTGAAGAAGGCCATGCGT TGCCAACAACCAATGAGTTGCTGACCTATGCGATTGAGGATAACTTCTGGACCGCAGAGTATCGTAGTTATAAACGAACT GCGTTCTAG
Upstream 100 bases:
>100_bases TATTCACCTTGAAACAGTTTGCCAAAAACCGCTCTGAGCAGATAAAGTTCTTATACTGATTGGTATTACTCTACTAACAA AAACAAAGAAAAGGTTTCCA
Downstream 100 bases:
>100_bases TTCTGAACGTTAGTATTCGCAACGTTCATTAGCGAAGTTGAAACAAAAAGCAGTCATATTTGGCTGCTTTTTTGTTTTTT GGCTTTTGTGTTATCCGGTA
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MDDNKRPLYLPFAGPAILEAPLINKGSAFTDEERIFFNLEGLLPHVIETIEEQASRAYDQYKNFSNDLDKHIYLRNIQDT NETLYYRLVQNHITEMMPIIYTPTVGMACERFSKDYRRNRGLFISYANKDRIDDILNNSTRQKVKIIVVTDGERILGLGD QGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGMRSPRIGGEEYTEFVEAFMQAVHRRWPDALI QFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKTQLSEQRITFLGAGSAGCGIAEAIVAQMVSEGI SEAQARKQVFMVDRWGMLQSNMPNLLPFQQKLAQNCDDITSWDNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIIKA MHSHCKRPIVFPLSNPTSRVEATPKDILHWTQGQALVATGSPFEPVVVDDVTYEIAQCNNSYIFPGIGLGVLASGAKRVS DAMLMASSRALAECSPLAIDGEGSLLPKLEDIHKVSKHIAFAVARTAIEEGHALPTTNELLTYAIEDNFWTAEYRSYKRT AF
Sequences:
>Translated_562_residues MDDNKRPLYLPFAGPAILEAPLINKGSAFTDEERIFFNLEGLLPHVIETIEEQASRAYDQYKNFSNDLDKHIYLRNIQDT NETLYYRLVQNHITEMMPIIYTPTVGMACERFSKDYRRNRGLFISYANKDRIDDILNNSTRQKVKIIVVTDGERILGLGD QGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGMRSPRIGGEEYTEFVEAFMQAVHRRWPDALI QFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKTQLSEQRITFLGAGSAGCGIAEAIVAQMVSEGI SEAQARKQVFMVDRWGMLQSNMPNLLPFQQKLAQNCDDITSWDNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIIKA MHSHCKRPIVFPLSNPTSRVEATPKDILHWTQGQALVATGSPFEPVVVDDVTYEIAQCNNSYIFPGIGLGVLASGAKRVS DAMLMASSRALAECSPLAIDGEGSLLPKLEDIHKVSKHIAFAVARTAIEEGHALPTTNELLTYAIEDNFWTAEYRSYKRT AF >Mature_562_residues MDDNKRPLYLPFAGPAILEAPLINKGSAFTDEERIFFNLEGLLPHVIETIEEQASRAYDQYKNFSNDLDKHIYLRNIQDT NETLYYRLVQNHITEMMPIIYTPTVGMACERFSKDYRRNRGLFISYANKDRIDDILNNSTRQKVKIIVVTDGERILGLGD QGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGMRSPRIGGEEYTEFVEAFMQAVHRRWPDALI QFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKTQLSEQRITFLGAGSAGCGIAEAIVAQMVSEGI SEAQARKQVFMVDRWGMLQSNMPNLLPFQQKLAQNCDDITSWDNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIIKA MHSHCKRPIVFPLSNPTSRVEATPKDILHWTQGQALVATGSPFEPVVVDDVTYEIAQCNNSYIFPGIGLGVLASGAKRVS DAMLMASSRALAECSPLAIDGEGSLLPKLEDIHKVSKHIAFAVARTAIEEGHALPTTNELLTYAIEDNFWTAEYRSYKRT AF
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=515, Percent_Identity=43.495145631068, Blast_Score=443, Evalue=1e-124, Organism=Homo sapiens, GI62420882, Length=520, Percent_Identity=42.5, Blast_Score=431, Evalue=1e-121, Organism=Homo sapiens, GI62420880, Length=520, Percent_Identity=42.5, Blast_Score=431, Evalue=1e-121, Organism=Homo sapiens, GI239049447, Length=520, Percent_Identity=42.5, Blast_Score=431, Evalue=1e-121, Organism=Homo sapiens, GI4505145, Length=556, Percent_Identity=42.0863309352518, Blast_Score=431, Evalue=1e-121, Organism=Homo sapiens, GI270265879, Length=464, Percent_Identity=45.4741379310345, Blast_Score=400, Evalue=1e-111, Organism=Escherichia coli, GI87081919, Length=558, Percent_Identity=68.2795698924731, Blast_Score=793, Evalue=0.0, Organism=Escherichia coli, GI1788806, Length=406, Percent_Identity=24.6305418719212, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17537199, Length=550, Percent_Identity=43.6363636363636, Blast_Score=426, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6322823, Length=526, Percent_Identity=46.3878326996198, Blast_Score=450, Evalue=1e-127, Organism=Drosophila melanogaster, GI281362672, Length=516, Percent_Identity=43.2170542635659, Blast_Score=431, Evalue=1e-121, Organism=Drosophila melanogaster, GI281362674, Length=516, Percent_Identity=43.2170542635659, Blast_Score=431, Evalue=1e-121, Organism=Drosophila melanogaster, GI21356279, Length=516, Percent_Identity=43.2170542635659, Blast_Score=431, Evalue=1e-121, Organism=Drosophila melanogaster, GI24646386, Length=513, Percent_Identity=43.2748538011696, Blast_Score=424, Evalue=1e-119, Organism=Drosophila melanogaster, GI24646388, Length=513, Percent_Identity=43.2748538011696, Blast_Score=424, Evalue=1e-119, Organism=Drosophila melanogaster, GI78707242, Length=515, Percent_Identity=39.8058252427184, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI78707238, Length=515, Percent_Identity=39.8058252427184, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI78707232, Length=509, Percent_Identity=38.3104125736739, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI78707240, Length=516, Percent_Identity=39.7286821705426, Blast_Score=376, Evalue=1e-104, Organism=Drosophila melanogaster, GI281363505, Length=536, Percent_Identity=36.7537313432836, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI78707236, Length=536, Percent_Identity=36.7537313432836, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI281363503, Length=537, Percent_Identity=36.4990689013035, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI19922384, Length=544, Percent_Identity=28.8602941176471, Blast_Score=247, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 62324; Mature: 62324
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDNKRPLYLPFAGPAILEAPLINKGSAFTDEERIFFNLEGLLPHVIETIEEQASRAYDQ CCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH YKNFSNDLDKHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKDYRRNR HHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHCC GLFISYANKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCG CEEEEECCCHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEECCC GISPAYTLPITLDVGTDNPHLLEDPMYMGMRSPRIGGEEYTEFVEAFMQAVHRRWPDALI CCCCCEEEEEEEEECCCCCCEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH QFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKTQLSEQRITFLGA HHHHHHHCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GSAGCGIAEAIVAQMVSEGISEAQARKQVFMVDRWGMLQSNMPNLLPFQQKLAQNCDDIT CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCCCCHHHHHHHCCCCCCC SWDNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIIKAMHSHCKRPIVFPLSNPTSRV CCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHC EATPKDILHWTQGQALVATGSPFEPVVVDDVTYEIAQCNNSYIFPGIGLGVLASGAKRVS CCCHHHHHHHCCCCEEEECCCCCCCEEECCCHHHHHHCCCCEECCCCCHHHHHHHHHHHH DAMLMASSRALAECSPLAIDGEGSLLPKLEDIHKVSKHIAFAVARTAIEEGHALPTTNEL HHHHHHCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LTYAIEDNFWTAEYRSYKRTAF EEEEEECCEEEHHHHHHHHCCC >Mature Secondary Structure MDDNKRPLYLPFAGPAILEAPLINKGSAFTDEERIFFNLEGLLPHVIETIEEQASRAYDQ CCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH YKNFSNDLDKHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKDYRRNR HHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHCC GLFISYANKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCG CEEEEECCCHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEECCC GISPAYTLPITLDVGTDNPHLLEDPMYMGMRSPRIGGEEYTEFVEAFMQAVHRRWPDALI CCCCCEEEEEEEEECCCCCCEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH QFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKTQLSEQRITFLGA HHHHHHHCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GSAGCGIAEAIVAQMVSEGISEAQARKQVFMVDRWGMLQSNMPNLLPFQQKLAQNCDDIT CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCCCCHHHHHHHCCCCCCC SWDNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIIKAMHSHCKRPIVFPLSNPTSRV CCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHC EATPKDILHWTQGQALVATGSPFEPVVVDDVTYEIAQCNNSYIFPGIGLGVLASGAKRVS CCCHHHHHHHCCCCEEEECCCCCCCEEECCCHHHHHHCCCCEECCCCCHHHHHHHHHHHH DAMLMASSRALAECSPLAIDGEGSLLPKLEDIHKVSKHIAFAVARTAIEEGHALPTTNEL HHHHHHCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LTYAIEDNFWTAEYRSYKRTAF EEEEEECCEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA