| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yehS [H]
Identifier: 157963002
GI number: 157963002
Start: 3904421
End: 3904894
Strand: Direct
Name: yehS [H]
Synonym: Spea_3185
Alternate gene names: 157963002
Gene position: 3904421-3904894 (Clockwise)
Preceding gene: 157963001
Following gene: 157963003
Centisome position: 75.45
GC content: 41.77
Gene sequence:
>474_bases ATGATTAACAATGATATTTTACGTAAAGTTCGCTATATCCTCGACTTAAGCAATGCAAAGATGATCCGTATTTTTGCTAA AACTAAGCACGAAGTGACTCAAGAGCAGATGATCGACATGCTTAAAAAAGAGCATGAAGAAGGTTATACACCGCTTAATG ACAAGAACATGTGTCATTTCCTAGACGGTTTAGTGATCTACAAGCGTGGCCTAAAGCCTGGCGCTGAAGCACCTGAGCCG CTATCTCAATTGACCAATAACCTTATCTTCAAGAAGCTAAGAGTGGCATTTGAGTTACGTGAAGACGATATCATTGAAGC GCTAGAACTAGCTGAATTCAACATGAGCAAGTCTGAGCTAGGCGCTCTATTTAGAAAGCCTGGTCACAAGCACTACAAGC CATGTGGCGACCAAGTATTACGTAACTTCTTGATGGGCTTATCACTTAAGCACCGTCCAGAAAACGCTAGCTAA
Upstream 100 bases:
>100_bases TAATGCATCTAAGAGGCTGCTATTTAACAGCCAATGTCTGCTATAATAGCCTCGATGATCGCGCAGCCGCGCGATCCCAT AGTTAGAAGAAATCAAACCA
Downstream 100 bases:
>100_bases TTATCACACGTATTTATATGCAAGTGATTGAAAGCACTGCCAATGGCGGTGCTTTTTTTTAGGAGCTAGGAACTAGATCC TAGGACGCTTCGCTGCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MINNDILRKVRYILDLSNAKMIRIFAKTKHEVTQEQMIDMLKKEHEEGYTPLNDKNMCHFLDGLVIYKRGLKPGAEAPEP LSQLTNNLIFKKLRVAFELREDDIIEALELAEFNMSKSELGALFRKPGHKHYKPCGDQVLRNFLMGLSLKHRPENAS
Sequences:
>Translated_157_residues MINNDILRKVRYILDLSNAKMIRIFAKTKHEVTQEQMIDMLKKEHEEGYTPLNDKNMCHFLDGLVIYKRGLKPGAEAPEP LSQLTNNLIFKKLRVAFELREDDIIEALELAEFNMSKSELGALFRKPGHKHYKPCGDQVLRNFLMGLSLKHRPENAS >Mature_157_residues MINNDILRKVRYILDLSNAKMIRIFAKTKHEVTQEQMIDMLKKEHEEGYTPLNDKNMCHFLDGLVIYKRGLKPGAEAPEP LSQLTNNLIFKKLRVAFELREDDIIEALELAEFNMSKSELGALFRKPGHKHYKPCGDQVLRNFLMGLSLKHRPENAS
Specific function: Unknown
COG id: COG4807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788443, Length=151, Percent_Identity=45.0331125827815, Blast_Score=136, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009921 [H]
Pfam domain/function: PF07308 DUF1456 [H]
EC number: NA
Molecular weight: Translated: 18194; Mature: 18194
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNDILRKVRYILDLSNAKMIRIFAKTKHEVTQEQMIDMLKKEHEEGYTPLNDKNMCHF CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LDGLVIYKRGLKPGAEAPEPLSQLTNNLIFKKLRVAFELREDDIIEALELAEFNMSKSEL HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH GALFRKPGHKHYKPCGDQVLRNFLMGLSLKHRPENAS HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MINNDILRKVRYILDLSNAKMIRIFAKTKHEVTQEQMIDMLKKEHEEGYTPLNDKNMCHF CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LDGLVIYKRGLKPGAEAPEPLSQLTNNLIFKKLRVAFELREDDIIEALELAEFNMSKSEL HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH GALFRKPGHKHYKPCGDQVLRNFLMGLSLKHRPENAS HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]