| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963001
Identifier: 157963001
GI number: 157963001
Start: 3903154
End: 3904323
Strand: Direct
Name: 157963001
Synonym: Spea_3184
Alternate gene names: NA
Gene position: 3903154-3904323 (Clockwise)
Preceding gene: 157963000
Following gene: 157963002
Centisome position: 75.43
GC content: 46.67
Gene sequence:
>1170_bases ATGCACCTAATAACAAAAACACTAATAGGCTCAGTCGTTGTTGGCTGCTGTCTTTGGGCTGCTAACAAAGCCAGTGCAAA CCGCGTCGCCAGCAGTGATATCGCCAAACAGCTGCCTACCATTATCACTCAAGCCAAGCGTCCCTTTAGTGGCATCATTA TGCTCAAGCGTGACAATCAACCGATATTTACCTATATCTCAGGTGACGACATTGAAATCAATTCAAGCTTTGTTATCGCA TCCCTGTCTAAGCAAGTCACCGCTGCGTTAGTTCTAAAAGCCGTTGATGAAGGCTTAATTGAGCTAGAGCAAAGTGTGAG TCATTACCTCGCGAAACAAGCTAATGAGGCCAAGCTCTATATTCCCCCTAGCGTCACAGTGTCGCAGTTACTCAGCCACA CGTCAGGGCTGGTCAATATCGGCGAAGCGCCGCTATATAAGCCCGGTAGTCAGTTTCAATATTCAAATTACGGTTATGCA TTACTTGGTGAGTTACTCGAAACGGTTTACCACAAGCCGATTTATCAACTAGTCAACGAACTCAATGAGCAAACTAAGCT CAATGGTTTATACGCAGAAACAGGCGAGCTCAGCAGCATTAAAACCAAACATCCAAGTTTGATCCTCGGCCAAGCCGAAG AGCAGACTCAAGATGCTGATGGCAAAAACCACTCACACTATACCCATGCCGACATCAACATAGATAAAAAATTGGTTGCC TTCGGCGGTATGATCGCCTCAGTAGAAGCTTATAGCCAGTTTCAGTACGCCCTTTACAGTGGCAAATTGATTAGCCCACA GAGCCTGGAGTTAATGACCTCCCCCCAAGCCACCCGTAACCACAGGTGGGGCGTATTAGAATACGGCTATGGCACACAAA TTAGCCGAGATGAACAGTTGCTCGAATATAGCCACAGTGGCTATTTGCCTGGCTATGTGAGTCTCGCGACTTACTACCCT AAGTCTAACGTGAGTCTGGTTATCTTCGAAAACACTTCATGGGATCTTAGCGACAGTGAAAGAACCTTTGGCTTACACGA TGACATTCGTAACAGCATTCGCAGTAAACTGATTGCACTTGAAAACCGCCCAGTAGAAAAGCTCTATCAAGCCGGAGTTT TGGCCGTCGAAAGCGTGATGACTCCCACAGCCCCCAAGCTAGCAGACTAA
Upstream 100 bases:
>100_bases AGTACTCTCATGGCTTGGCTTAACTTACTTAGTGAGTTTTGCCGCACTATTTATCTATTGGATGCTCACAAAATAACGTA AACGGACACCTACACCTTAA
Downstream 100 bases:
>100_bases TGCATCTAAGAGGCTGCTATTTAACAGCCAATGTCTGCTATAATAGCCTCGATGATCGCGCAGCCGCGCGATCCCATAGT TAGAAGAAATCAAACCAATG
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase Family Protein; Secreted Peptidase; D-Alanyl-D-Alanine Carboxypeptidase; Beta-Lactamase Class C-Like Protein; Alkaline D-Peptidase
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MHLITKTLIGSVVVGCCLWAANKASANRVASSDIAKQLPTIITQAKRPFSGIIMLKRDNQPIFTYISGDDIEINSSFVIA SLSKQVTAALVLKAVDEGLIELEQSVSHYLAKQANEAKLYIPPSVTVSQLLSHTSGLVNIGEAPLYKPGSQFQYSNYGYA LLGELLETVYHKPIYQLVNELNEQTKLNGLYAETGELSSIKTKHPSLILGQAEEQTQDADGKNHSHYTHADINIDKKLVA FGGMIASVEAYSQFQYALYSGKLISPQSLELMTSPQATRNHRWGVLEYGYGTQISRDEQLLEYSHSGYLPGYVSLATYYP KSNVSLVIFENTSWDLSDSERTFGLHDDIRNSIRSKLIALENRPVEKLYQAGVLAVESVMTPTAPKLAD
Sequences:
>Translated_389_residues MHLITKTLIGSVVVGCCLWAANKASANRVASSDIAKQLPTIITQAKRPFSGIIMLKRDNQPIFTYISGDDIEINSSFVIA SLSKQVTAALVLKAVDEGLIELEQSVSHYLAKQANEAKLYIPPSVTVSQLLSHTSGLVNIGEAPLYKPGSQFQYSNYGYA LLGELLETVYHKPIYQLVNELNEQTKLNGLYAETGELSSIKTKHPSLILGQAEEQTQDADGKNHSHYTHADINIDKKLVA FGGMIASVEAYSQFQYALYSGKLISPQSLELMTSPQATRNHRWGVLEYGYGTQISRDEQLLEYSHSGYLPGYVSLATYYP KSNVSLVIFENTSWDLSDSERTFGLHDDIRNSIRSKLIALENRPVEKLYQAGVLAVESVMTPTAPKLAD >Mature_389_residues MHLITKTLIGSVVVGCCLWAANKASANRVASSDIAKQLPTIITQAKRPFSGIIMLKRDNQPIFTYISGDDIEINSSFVIA SLSKQVTAALVLKAVDEGLIELEQSVSHYLAKQANEAKLYIPPSVTVSQLLSHTSGLVNIGEAPLYKPGSQFQYSNYGYA LLGELLETVYHKPIYQLVNELNEQTKLNGLYAETGELSSIKTKHPSLILGQAEEQTQDADGKNHSHYTHADINIDKKLVA FGGMIASVEAYSQFQYALYSGKLISPQSLELMTSPQATRNHRWGVLEYGYGTQISRDEQLLEYSHSGYLPGYVSLATYYP KSNVSLVIFENTSWDLSDSERTFGLHDDIRNSIRSKLIALENRPVEKLYQAGVLAVESVMTPTAPKLAD
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42913; Mature: 42913
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLITKTLIGSVVVGCCLWAANKASANRVASSDIAKQLPTIITQAKRPFSGIIMLKRDNQ CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC PIFTYISGDDIEINSSFVIASLSKQVTAALVLKAVDEGLIELEQSVSHYLAKQANEAKLY CEEEEECCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE IPPSVTVSQLLSHTSGLVNIGEAPLYKPGSQFQYSNYGYALLGELLETVYHKPIYQLVNE ECCCCHHHHHHHHCCCCEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHH LNEQTKLNGLYAETGELSSIKTKHPSLILGQAEEQTQDADGKNHSHYTHADINIDKKLVA HHHHHHHCCEEECCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCEEEECCCCCHHHHH FGGMIASVEAYSQFQYALYSGKLISPQSLELMTSPQATRNHRWGVLEYGYGTQISRDEQL HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCHHHH LEYSHSGYLPGYVSLATYYPKSNVSLVIFENTSWDLSDSERTFGLHDDIRNSIRSKLIAL HHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ENRPVEKLYQAGVLAVESVMTPTAPKLAD CCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHLITKTLIGSVVVGCCLWAANKASANRVASSDIAKQLPTIITQAKRPFSGIIMLKRDNQ CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC PIFTYISGDDIEINSSFVIASLSKQVTAALVLKAVDEGLIELEQSVSHYLAKQANEAKLY CEEEEECCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE IPPSVTVSQLLSHTSGLVNIGEAPLYKPGSQFQYSNYGYALLGELLETVYHKPIYQLVNE ECCCCHHHHHHHHCCCCEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCHHHHHHHH LNEQTKLNGLYAETGELSSIKTKHPSLILGQAEEQTQDADGKNHSHYTHADINIDKKLVA HHHHHHHCCEEECCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCEEEECCCCCHHHHH FGGMIASVEAYSQFQYALYSGKLISPQSLELMTSPQATRNHRWGVLEYGYGTQISRDEQL HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCHHHH LEYSHSGYLPGYVSLATYYPKSNVSLVIFENTSWDLSDSERTFGLHDDIRNSIRSKLIAL HHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ENRPVEKLYQAGVLAVESVMTPTAPKLAD CCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA