Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157962848

Identifier: 157962848

GI number: 157962848

Start: 3715510

End: 3716079

Strand: Direct

Name: 157962848

Synonym: Spea_3030

Alternate gene names: NA

Gene position: 3715510-3716079 (Clockwise)

Preceding gene: 157962847

Following gene: 157962849

Centisome position: 71.8

GC content: 42.46

Gene sequence:

>570_bases
ATGTCTGTTAGGTTTTGCCGTTTCGTGTTCGAATTATCACATCAAGCTTTATTATGGGCTCAAGCCTTAGGCTTTATCTC
AATGGCCATTGGCTGGTGGGCTAACTATCAGGAAAATGATCAACAATTATTCTCAGGCAACCTCATCGCTTCTTGTCTCA
CAGCTATTCACTTAGGCTTACTCGGCAGCACATTGGGTATGTTCAACCAAGTTGTTAATGCTATGCGTTTTGCGACTTGT
CGACATAGCTCGAGCCTAGATGGTTATTTAAGGAATATCTTGCCACTGCTATTTTCAAGTATTGCTGTACTACAGGGGTT
TGTATGGGCCGAACATTGGAGTGAGTGGTGCGCAGTTGCTAGCGCTGTACTGATGAGTTTTGCCCTATTTCACTTAAAGG
GCGGGCACTTACGCTGCGCCATGATGATAAGTAATGTTCTCAGCCTAACCCTTTCAATCCATTTATTATCTTGGTCTGGG
ATCTTATATCAACTGGTAACACTGGTTATTTTAGCACACGGTTTATTGCCTCAAAAACAAACTGATTTATCCACTGAACA
AACCGCTTAA

Upstream 100 bases:

>100_bases
GGCTCACAACTCACCAAAAAATCGAAAAACAAAACCGCGTAAACCGCTTAAGATCACAGTTTAACTGAGCAAAAAAACGA
CAATAGCAATCCGTTTTTCC

Downstream 100 bases:

>100_bases
GGCTTACCGTACGATATCGACTAACTGCTTATTAACAGCAAATTTGTTGGCATAGGTATCGCTTAGCGAGTGGTATTAAT
GATTAGTATTAGCTAGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSVRFCRFVFELSHQALLWAQALGFISMAIGWWANYQENDQQLFSGNLIASCLTAIHLGLLGSTLGMFNQVVNAMRFATC
RHSSSLDGYLRNILPLLFSSIAVLQGFVWAEHWSEWCAVASAVLMSFALFHLKGGHLRCAMMISNVLSLTLSIHLLSWSG
ILYQLVTLVILAHGLLPQKQTDLSTEQTA

Sequences:

>Translated_189_residues
MSVRFCRFVFELSHQALLWAQALGFISMAIGWWANYQENDQQLFSGNLIASCLTAIHLGLLGSTLGMFNQVVNAMRFATC
RHSSSLDGYLRNILPLLFSSIAVLQGFVWAEHWSEWCAVASAVLMSFALFHLKGGHLRCAMMISNVLSLTLSIHLLSWSG
ILYQLVTLVILAHGLLPQKQTDLSTEQTA
>Mature_188_residues
SVRFCRFVFELSHQALLWAQALGFISMAIGWWANYQENDQQLFSGNLIASCLTAIHLGLLGSTLGMFNQVVNAMRFATCR
HSSSLDGYLRNILPLLFSSIAVLQGFVWAEHWSEWCAVASAVLMSFALFHLKGGHLRCAMMISNVLSLTLSIHLLSWSGI
LYQLVTLVILAHGLLPQKQTDLSTEQTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21019; Mature: 20888

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRFCRFVFELSHQALLWAQALGFISMAIGWWANYQENDQQLFSGNLIASCLTAIHLGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGSTLGMFNQVVNAMRFATCRHSSSLDGYLRNILPLLFSSIAVLQGFVWAEHWSEWCAVA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLMSFALFHLKGGHLRCAMMISNVLSLTLSIHLLSWSGILYQLVTLVILAHGLLPQKQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TDLSTEQTA
CCCCCCCCC
>Mature Secondary Structure 
SVRFCRFVFELSHQALLWAQALGFISMAIGWWANYQENDQQLFSGNLIASCLTAIHLGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGSTLGMFNQVVNAMRFATCRHSSSLDGYLRNILPLLFSSIAVLQGFVWAEHWSEWCAVA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLMSFALFHLKGGHLRCAMMISNVLSLTLSIHLLSWSGILYQLVTLVILAHGLLPQKQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TDLSTEQTA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA