Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962847

Identifier: 157962847

GI number: 157962847

Start: 3714085

End: 3715350

Strand: Direct

Name: 157962847

Synonym: Spea_3029

Alternate gene names: NA

Gene position: 3714085-3715350 (Clockwise)

Preceding gene: 157962843

Following gene: 157962848

Centisome position: 71.78

GC content: 47.0

Gene sequence:

>1266_bases
ATGCCTCAGCGGTTGTTTGATTGTTTTTCGCACTTTTGCTTATACTGTGCTCACAGCATTGATTATAAGAAAAACAATAT
GGAACTCAGTAAAATAGCTAACATCAGCCTCGCTGCGCTCATCAGCTTACAGGCCTTTGACTCTATTGCTGCAGTTGAAT
TCTTCGACCCTATTGATGGCTACTTTGATGCTGGCCAATACCTTGCCGAAAACGCCTATGGCTTTTTACCCGTCCCCACC
ATTATAACTGAGCCGTCTGTGGGTAACGGCATTGCCGTGATGGGGATGTTTTTGCATGAAAGTGCCGAGCAACAACAGGC
GCGCAAGGAGCTTGCCACTCACTCTATCGATGGCGGCGCGCAGCTATTAACACCAGGGATCTCGGTTGTCGGCGTTGGCG
CAACGGATAACGGCACTAAGATGGCATTTGCGGGCCATAGGCAAACTTGGGCGCAAGATAGCGTTCGCTACCTCGTTGGT
GGCGGTTACGGCGACATCAATATGAGCTTTTATAGCCAAAGTGATTTTGCACAAGATTTGTCATTAGATATGAATATGCA
AGGCTTCGGTATTATTCAAAAGCTGCAATACCGCATTAACTCAAGCCCGCTGTTTCTTGGGGTATCGCAAAAATATCTTA
GCTTAGATTTAAGCAGTCGCCGTGAGTTTGACAATATTCCACCTGAGCTTATAGATAGGCTAACCGATATCATAGATACA
TCGCCTAAGGTGTCCTCTATTGGAGCGATTGTGGAATACGACAGCTTGAATAATTTCTTTCTCCCCACCAGCGGCTACAA
TTATCTACTCGAATACGACTGGTTTAGCAAAGATATCGGTAGCGACTACAACTACCAAACGCTTAATGTTAAAGGGCTAA
ACTATTGGCCTCTATCAAACAGCCTCACCTTAGGTGTAAAACTGCATTACCAAACCATCGACAGTGACGGCCGCCTGCCT
ATTTTCACCTATCCCTTTATCGATCTACGCGGTATACCGAAGAACCGTTATCAGGGGCAAAATGTCGGCTCAGGTGAAGT
GCAAATCATGTGGAAACTCAACCCTCGCTGGATGTTACTCTCATTCGCTGGCAGCGGACTCGCGGGTAAAAGCTCTAGTG
ATATGTGGGATAGCGAACTGCAAAATGCCTATGGTGCTGGCTTTAGGTACACCATAGCTAGGCGCTATGGCTTACACATG
GGAGTCGATGTGGCGCGGGGGCCTGAAGACACGGCTTTGTATATCAATGTCGGCAGCGGATTTTAA

Upstream 100 bases:

>100_bases
TCGAATAACCTAATAATTGAAACAGCCATAATAACTCACCAGCAAAGCGGACAAGCTCATTCCCCAGCCCCTTACAGCTA
TTTGTCTATCCTGCCGTATA

Downstream 100 bases:

>100_bases
CGTACTAGAACGCCCCTCCCCTGCCATATAGTTTAGGCGAAACTTATATAGCGTGAAGTGGCTCACAACTCACCAAAAAA
TCGAAAAACAAAACCGCGTA

Product: glyceraldehyde 3-phosphate dehydrogenase

Products: 3-phospho-D-glyceroyl phosphate; NADH; H+

Alternate protein names: Outer Membrane Protein/Protective Antigen OMA; Outer Membrane Protein; Surface Antigen

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MPQRLFDCFSHFCLYCAHSIDYKKNNMELSKIANISLAALISLQAFDSIAAVEFFDPIDGYFDAGQYLAENAYGFLPVPT
IITEPSVGNGIAVMGMFLHESAEQQQARKELATHSIDGGAQLLTPGISVVGVGATDNGTKMAFAGHRQTWAQDSVRYLVG
GGYGDINMSFYSQSDFAQDLSLDMNMQGFGIIQKLQYRINSSPLFLGVSQKYLSLDLSSRREFDNIPPELIDRLTDIIDT
SPKVSSIGAIVEYDSLNNFFLPTSGYNYLLEYDWFSKDIGSDYNYQTLNVKGLNYWPLSNSLTLGVKLHYQTIDSDGRLP
IFTYPFIDLRGIPKNRYQGQNVGSGEVQIMWKLNPRWMLLSFAGSGLAGKSSSDMWDSELQNAYGAGFRYTIARRYGLHM
GVDVARGPEDTALYINVGSGF

Sequences:

>Translated_421_residues
MPQRLFDCFSHFCLYCAHSIDYKKNNMELSKIANISLAALISLQAFDSIAAVEFFDPIDGYFDAGQYLAENAYGFLPVPT
IITEPSVGNGIAVMGMFLHESAEQQQARKELATHSIDGGAQLLTPGISVVGVGATDNGTKMAFAGHRQTWAQDSVRYLVG
GGYGDINMSFYSQSDFAQDLSLDMNMQGFGIIQKLQYRINSSPLFLGVSQKYLSLDLSSRREFDNIPPELIDRLTDIIDT
SPKVSSIGAIVEYDSLNNFFLPTSGYNYLLEYDWFSKDIGSDYNYQTLNVKGLNYWPLSNSLTLGVKLHYQTIDSDGRLP
IFTYPFIDLRGIPKNRYQGQNVGSGEVQIMWKLNPRWMLLSFAGSGLAGKSSSDMWDSELQNAYGAGFRYTIARRYGLHM
GVDVARGPEDTALYINVGSGF
>Mature_420_residues
PQRLFDCFSHFCLYCAHSIDYKKNNMELSKIANISLAALISLQAFDSIAAVEFFDPIDGYFDAGQYLAENAYGFLPVPTI
ITEPSVGNGIAVMGMFLHESAEQQQARKELATHSIDGGAQLLTPGISVVGVGATDNGTKMAFAGHRQTWAQDSVRYLVGG
GYGDINMSFYSQSDFAQDLSLDMNMQGFGIIQKLQYRINSSPLFLGVSQKYLSLDLSSRREFDNIPPELIDRLTDIIDTS
PKVSSIGAIVEYDSLNNFFLPTSGYNYLLEYDWFSKDIGSDYNYQTLNVKGLNYWPLSNSLTLGVKLHYQTIDSDGRLPI
FTYPFIDLRGIPKNRYQGQNVGSGEVQIMWKLNPRWMLLSFAGSGLAGKSSSDMWDSELQNAYGAGFRYTIARRYGLHMG
VDVARGPEDTALYINVGSGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.12

Molecular weight: Translated: 46775; Mature: 46644

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRLFDCFSHFCLYCAHSIDYKKNNMELSKIANISLAALISLQAFDSIAAVEFFDPIDG
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCC
YFDAGQYLAENAYGFLPVPTIITEPSVGNGIAVMGMFLHESAEQQQARKELATHSIDGGA
HHHCCHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QLLTPGISVVGVGATDNGTKMAFAGHRQTWAQDSVRYLVGGGYGDINMSFYSQSDFAQDL
EEECCCCEEEEECCCCCCCEEEEECCCCHHHHCCEEEEEECCCCCEEEEEECCCCHHHHC
SLDMNMQGFGIIQKLQYRINSSPLFLGVSQKYLSLDLSSRREFDNIPPELIDRLTDIIDT
CCCCCCCCHHHHHHHHHHCCCCCEEEEECCEEEEEECHHCCCCCCCCHHHHHHHHHHHCC
SPKVSSIGAIVEYDSLNNFFLPTSGYNYLLEYDWFSKDIGSDYNYQTLNVKGLNYWPLSN
CCCHHHCCEEEEECCCCCEEECCCCCCEEEEECCCCHHHCCCCCEEEEEEECCEEECCCC
SLTLGVKLHYQTIDSDGRLPIFTYPFIDLRGIPKNRYQGQNVGSGEVQIMWKLNPRWMLL
CEEEEEEEEEEEECCCCCEEEEEECCEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEE
SFAGSGLAGKSSSDMWDSELQNAYGAGFRYTIARRYGLHMGVDVARGPEDTALYINVGSG
EECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEHHCCCEECCEECCCCCCCEEEEECCCC
F
C
>Mature Secondary Structure 
PQRLFDCFSHFCLYCAHSIDYKKNNMELSKIANISLAALISLQAFDSIAAVEFFDPIDG
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCC
YFDAGQYLAENAYGFLPVPTIITEPSVGNGIAVMGMFLHESAEQQQARKELATHSIDGGA
HHHCCHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QLLTPGISVVGVGATDNGTKMAFAGHRQTWAQDSVRYLVGGGYGDINMSFYSQSDFAQDL
EEECCCCEEEEECCCCCCCEEEEECCCCHHHHCCEEEEEECCCCCEEEEEECCCCHHHHC
SLDMNMQGFGIIQKLQYRINSSPLFLGVSQKYLSLDLSSRREFDNIPPELIDRLTDIIDT
CCCCCCCCHHHHHHHHHHCCCCCEEEEECCEEEEEECHHCCCCCCCCHHHHHHHHHHHCC
SPKVSSIGAIVEYDSLNNFFLPTSGYNYLLEYDWFSKDIGSDYNYQTLNVKGLNYWPLSN
CCCHHHCCEEEEECCCCCEEECCCCCCEEEEECCCCHHHCCCCCEEEEEEECCEEECCCC
SLTLGVKLHYQTIDSDGRLPIFTYPFIDLRGIPKNRYQGQNVGSGEVQIMWKLNPRWMLL
CEEEEEEEEEEEECCCCCEEEEEECCEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEE
SFAGSGLAGKSSSDMWDSELQNAYGAGFRYTIARRYGLHMGVDVARGPEDTALYINVGSG
EECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEHHCCCEECCEECCCCCCCEEEEECCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-glyceraldehyde 3-phosphate; phosphate; NAD+

Specific reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA