| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962519
Identifier: 157962519
GI number: 157962519
Start: 3294567
End: 3296582
Strand: Direct
Name: 157962519
Synonym: Spea_2698
Alternate gene names: NA
Gene position: 3294567-3296582 (Clockwise)
Preceding gene: 157962518
Following gene: 157962520
Centisome position: 63.67
GC content: 44.1
Gene sequence:
>2016_bases ATGATGAATACGAATAAATCTAAAATTGCGCTGCTTCTAGCAGCTGGTGCTGTCTCTATGGCCCTTACAGGCTGTGGTGG CGACGATGGTAACGACGGTAATTCTGGCAACCCTGGTGGCCCGGCTGCTGATTACATCAACACGCTTAACCTAAAAGTGA CTGACGTTACTTATACCGATGGCGTTCCAACAATCAATGTGTTTGCGACAAACGAAGAAGACCTGCCTGTAGTTGGTCTA ACTGCGCTTGAAGTGAAAAAAGTTGTACAGCTTATCCCACAAGGCGCTACGGGTGCGGGTAACAGTGCAGAATGGCAAGC CACTTATAGCTCACCTCGTAATGATGCTGAGAAGCTAAAGCCTGTAGATCTAAAGAATGGTAACTACAGCTTCACTATTC CAGTTGAAGGTTATAACTCTGAGCTAACTCAACGTTATAACGTCATCGCCAGCGCTTCAACACTCGCCGATGGCGAAACA AGTGTGCCACGCACTGAGCTGTCACAAGACTTCTCAGGTGAAGGCTATGAAGCAACATACACTAAAGATGTCGTAGCGAC AGCAAGCTGTACCTCATGTCATGCTGAAGGCAAGAAGATTTACCACGGTTATACCTCTTCTGAAACTTGTGCTGCTTGTC ATACACAAGAAATGGCCGATGAAAAAGGTAAGCCACACGTAGCTTATAACTTCCTTATTCACAATGTTCATAACAACATT GAAGAAGCACACCTACCTGATGATGAAAAGCAAAACGAATCTGCAGAAAAGGCATATGCTTTAATTCAAGATAACTGTAC AACTTGTCACATAGCACCAACCGAAGACAGCAACGAGCTAACTGAATGGGGCAACTGGTCAAGCGTTCCAACCATGGAAA CTTGTACAAGTTGTCATACAGGCATCGACTTTGTCGCTGGTAAGGGCCACTCTCAACAAGCTGACAACTCAAACTGTATC GCTTGTCATAGTGCGAGCTGGACTGAAGAGCTGCATAACGAAGGCTTTGCTCAAAAGAAAGCTTTCATCGAGCAGTATGG GATGGTAGCAAGCTTAACTGCAGTAAAAACTGACACCGGTAGCGATACCACATTAAGTGTGACAATTACTGATGCAGCGG GCTCTGCAATTGATGCAACAGCTATTGTGGACAAAATCGAACAACTAGAAACCATCACTAATGTTGGTCCTAATTACCCA ATCATGGGTTACAAGCCTAATCCAATAAACGGTACCGAGAAAGTTGTTATTAACTTAACCGAGGCGGATATTGTTGATGG TAAATTCGTAACGGTAATTAAAGATTTACCTTACGGTGATGCTAAAACAGATACTGACACCGCGTTCACTTTAATCGGTC TATCTCTATGTAATGATGGTGAGACAGCTGTTAAGTGTGAAGAAGGTGTGTCACATACTAGTGTGAAGGCTGCTATGGCA CATGGCACATTATCTGGAGAGGCACCAAGCGTACGTCATACTGATTCAGTTAACTTCAAAGCGTGTGAAAGCTGTCATGG CACAGAATGGGAACTTCATGAGAAGTACCATGCAGGCTTTGTGATGACAGAACAGCTTGGCCGTGAAAATGCTGATGGTG AAACAGTTGTTGGCGTTGATGCTTGTGCAACTTGTCACACGCCAGACGGAGTTGGTTATTCTGGTAACTCACTAGCACTT GAAATGAGACTTCATAAAACGCATAAACAAGGTGACTATGCAGTTATTGCTGGCATGAATTGTGATCAGTGCCATAGCGA CTTCAATCGTGATGCATTCAAAAATAAAGGTGCTATAGAAACTTCTAGCGGTGCATACAGCACACCTATCGCTGCGACTT GTGTGTCTTGTCATAGTTACAACCTAGACAGCTTTAAAGCCCACGCAGAAGGCCAAGGCGCGATTGTTAATAACTCTGAA ATGACAAAACAACAAATTAGCGATGCAGCTCAGCTAGAAACTTGTTTCTACTGCCATAAGCCAACTGCAGACGATCACAC TTCTGTGAAGATGTAA
Upstream 100 bases:
>100_bases ATTTCCAGCATTGACTTAAGCGGCAATTAAAAAATTACAGTCGGTCTCGCTAAATCGAACCACACGTTTAAGACAGTGCC AAACCTATGCAGGGAAAAAA
Downstream 100 bases:
>100_bases TTTGCGCAACTCAAATGGACTCAAGTGTTAACCACCTGAGTCCAAGAGTGTTGAAAAAAGGGGGAGGCCTCTCCCCCACT TTCTCTTCAAAATTGTGCAA
Product: decaheme cytochrome c
Products: NA
Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; Decaheme Cytochrome C-Like Protein
Number of amino acids: Translated: 671; Mature: 671
Protein sequence:
>671_residues MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTDGVPTINVFATNEEDLPVVGL TALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLKPVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGET SVPRTELSQDFSGEGYEATYTKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHTGIDFVAGKGHSQQADNSNCI ACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTGSDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYP IMGYKPNPINGTEKVVINLTEADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVDACATCHTPDGVGYSGNSLAL EMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIETSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSE MTKQQISDAAQLETCFYCHKPTADDHTSVKM
Sequences:
>Translated_671_residues MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTDGVPTINVFATNEEDLPVVGL TALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLKPVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGET SVPRTELSQDFSGEGYEATYTKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHTGIDFVAGKGHSQQADNSNCI ACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTGSDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYP IMGYKPNPINGTEKVVINLTEADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVDACATCHTPDGVGYSGNSLAL EMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIETSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSE MTKQQISDAAQLETCFYCHKPTADDHTSVKM >Mature_671_residues MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTDGVPTINVFATNEEDLPVVGL TALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLKPVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGET SVPRTELSQDFSGEGYEATYTKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHTGIDFVAGKGHSQQADNSNCI ACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTGSDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYP IMGYKPNPINGTEKVVINLTEADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVDACATCHTPDGVGYSGNSLAL EMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIETSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSE MTKQQISDAAQLETCFYCHKPTADDHTSVKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71576; Mature: 71576
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTD CCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEEEEEEEECC GVPTINVFATNEEDLPVVGLTALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLK CCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHCC PVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGETSVPRTELSQDFSGEGYEATY CEEECCCCEEEEEEECCCCHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEE TKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI CCCEEEECCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCH EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHT HHHCCCCCHHCCCHHHHHHHHEECCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHC GIDFVAGKGHSQQADNSNCIACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTG CCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCC SDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYPIMGYKPNPINGTEKVVINLT CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEEEE EADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA CCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHH HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVD CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCEEEEHHHCCCCCCCCEEEEEC ACATCHTPDGVGYSGNSLALEMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIE CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHCCHHHHCCCCCEE TSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSEMTKQQISDAAQLETCFYCHK ECCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHEEEECC PTADDHTSVKM CCCCCCCCCCC >Mature Secondary Structure MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTD CCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEEEEEEEECC GVPTINVFATNEEDLPVVGLTALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLK CCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHCC PVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGETSVPRTELSQDFSGEGYEATY CEEECCCCEEEEEEECCCCHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEE TKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI CCCEEEECCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCH EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHT HHHCCCCCHHCCCHHHHHHHHEECCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHC GIDFVAGKGHSQQADNSNCIACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTG CCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCC SDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYPIMGYKPNPINGTEKVVINLT CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEEEE EADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA CCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHH HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVD CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCEEEEHHHCCCCCCCCEEEEEC ACATCHTPDGVGYSGNSLALEMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIE CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHCCHHHHCCCCCEE TSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSEMTKQQISDAAQLETCFYCHK ECCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHEEEECC PTADDHTSVKM CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA