Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962519

Identifier: 157962519

GI number: 157962519

Start: 3294567

End: 3296582

Strand: Direct

Name: 157962519

Synonym: Spea_2698

Alternate gene names: NA

Gene position: 3294567-3296582 (Clockwise)

Preceding gene: 157962518

Following gene: 157962520

Centisome position: 63.67

GC content: 44.1

Gene sequence:

>2016_bases
ATGATGAATACGAATAAATCTAAAATTGCGCTGCTTCTAGCAGCTGGTGCTGTCTCTATGGCCCTTACAGGCTGTGGTGG
CGACGATGGTAACGACGGTAATTCTGGCAACCCTGGTGGCCCGGCTGCTGATTACATCAACACGCTTAACCTAAAAGTGA
CTGACGTTACTTATACCGATGGCGTTCCAACAATCAATGTGTTTGCGACAAACGAAGAAGACCTGCCTGTAGTTGGTCTA
ACTGCGCTTGAAGTGAAAAAAGTTGTACAGCTTATCCCACAAGGCGCTACGGGTGCGGGTAACAGTGCAGAATGGCAAGC
CACTTATAGCTCACCTCGTAATGATGCTGAGAAGCTAAAGCCTGTAGATCTAAAGAATGGTAACTACAGCTTCACTATTC
CAGTTGAAGGTTATAACTCTGAGCTAACTCAACGTTATAACGTCATCGCCAGCGCTTCAACACTCGCCGATGGCGAAACA
AGTGTGCCACGCACTGAGCTGTCACAAGACTTCTCAGGTGAAGGCTATGAAGCAACATACACTAAAGATGTCGTAGCGAC
AGCAAGCTGTACCTCATGTCATGCTGAAGGCAAGAAGATTTACCACGGTTATACCTCTTCTGAAACTTGTGCTGCTTGTC
ATACACAAGAAATGGCCGATGAAAAAGGTAAGCCACACGTAGCTTATAACTTCCTTATTCACAATGTTCATAACAACATT
GAAGAAGCACACCTACCTGATGATGAAAAGCAAAACGAATCTGCAGAAAAGGCATATGCTTTAATTCAAGATAACTGTAC
AACTTGTCACATAGCACCAACCGAAGACAGCAACGAGCTAACTGAATGGGGCAACTGGTCAAGCGTTCCAACCATGGAAA
CTTGTACAAGTTGTCATACAGGCATCGACTTTGTCGCTGGTAAGGGCCACTCTCAACAAGCTGACAACTCAAACTGTATC
GCTTGTCATAGTGCGAGCTGGACTGAAGAGCTGCATAACGAAGGCTTTGCTCAAAAGAAAGCTTTCATCGAGCAGTATGG
GATGGTAGCAAGCTTAACTGCAGTAAAAACTGACACCGGTAGCGATACCACATTAAGTGTGACAATTACTGATGCAGCGG
GCTCTGCAATTGATGCAACAGCTATTGTGGACAAAATCGAACAACTAGAAACCATCACTAATGTTGGTCCTAATTACCCA
ATCATGGGTTACAAGCCTAATCCAATAAACGGTACCGAGAAAGTTGTTATTAACTTAACCGAGGCGGATATTGTTGATGG
TAAATTCGTAACGGTAATTAAAGATTTACCTTACGGTGATGCTAAAACAGATACTGACACCGCGTTCACTTTAATCGGTC
TATCTCTATGTAATGATGGTGAGACAGCTGTTAAGTGTGAAGAAGGTGTGTCACATACTAGTGTGAAGGCTGCTATGGCA
CATGGCACATTATCTGGAGAGGCACCAAGCGTACGTCATACTGATTCAGTTAACTTCAAAGCGTGTGAAAGCTGTCATGG
CACAGAATGGGAACTTCATGAGAAGTACCATGCAGGCTTTGTGATGACAGAACAGCTTGGCCGTGAAAATGCTGATGGTG
AAACAGTTGTTGGCGTTGATGCTTGTGCAACTTGTCACACGCCAGACGGAGTTGGTTATTCTGGTAACTCACTAGCACTT
GAAATGAGACTTCATAAAACGCATAAACAAGGTGACTATGCAGTTATTGCTGGCATGAATTGTGATCAGTGCCATAGCGA
CTTCAATCGTGATGCATTCAAAAATAAAGGTGCTATAGAAACTTCTAGCGGTGCATACAGCACACCTATCGCTGCGACTT
GTGTGTCTTGTCATAGTTACAACCTAGACAGCTTTAAAGCCCACGCAGAAGGCCAAGGCGCGATTGTTAATAACTCTGAA
ATGACAAAACAACAAATTAGCGATGCAGCTCAGCTAGAAACTTGTTTCTACTGCCATAAGCCAACTGCAGACGATCACAC
TTCTGTGAAGATGTAA

Upstream 100 bases:

>100_bases
ATTTCCAGCATTGACTTAAGCGGCAATTAAAAAATTACAGTCGGTCTCGCTAAATCGAACCACACGTTTAAGACAGTGCC
AAACCTATGCAGGGAAAAAA

Downstream 100 bases:

>100_bases
TTTGCGCAACTCAAATGGACTCAAGTGTTAACCACCTGAGTCCAAGAGTGTTGAAAAAAGGGGGAGGCCTCTCCCCCACT
TTCTCTTCAAAATTGTGCAA

Product: decaheme cytochrome c

Products: NA

Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; Decaheme Cytochrome C-Like Protein

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTDGVPTINVFATNEEDLPVVGL
TALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLKPVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGET
SVPRTELSQDFSGEGYEATYTKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI
EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHTGIDFVAGKGHSQQADNSNCI
ACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTGSDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYP
IMGYKPNPINGTEKVVINLTEADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA
HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVDACATCHTPDGVGYSGNSLAL
EMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIETSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSE
MTKQQISDAAQLETCFYCHKPTADDHTSVKM

Sequences:

>Translated_671_residues
MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTDGVPTINVFATNEEDLPVVGL
TALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLKPVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGET
SVPRTELSQDFSGEGYEATYTKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI
EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHTGIDFVAGKGHSQQADNSNCI
ACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTGSDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYP
IMGYKPNPINGTEKVVINLTEADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA
HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVDACATCHTPDGVGYSGNSLAL
EMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIETSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSE
MTKQQISDAAQLETCFYCHKPTADDHTSVKM
>Mature_671_residues
MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTDGVPTINVFATNEEDLPVVGL
TALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLKPVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGET
SVPRTELSQDFSGEGYEATYTKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI
EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHTGIDFVAGKGHSQQADNSNCI
ACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTGSDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYP
IMGYKPNPINGTEKVVINLTEADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA
HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVDACATCHTPDGVGYSGNSLAL
EMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIETSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSE
MTKQQISDAAQLETCFYCHKPTADDHTSVKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71576; Mature: 71576

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTD
CCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEEEEEEEECC
GVPTINVFATNEEDLPVVGLTALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLK
CCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHCC
PVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGETSVPRTELSQDFSGEGYEATY
CEEECCCCEEEEEEECCCCHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEE
TKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI
CCCEEEECCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCH
EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHT
HHHCCCCCHHCCCHHHHHHHHEECCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHC
GIDFVAGKGHSQQADNSNCIACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTG
CCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCC
SDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYPIMGYKPNPINGTEKVVINLT
CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEEEE
EADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA
CCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHH
HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVD
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCEEEEHHHCCCCCCCCEEEEEC
ACATCHTPDGVGYSGNSLALEMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIE
CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHCCHHHHCCCCCEE
TSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSEMTKQQISDAAQLETCFYCHK
ECCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHEEEECC
PTADDHTSVKM
CCCCCCCCCCC
>Mature Secondary Structure
MMNTNKSKIALLLAAGAVSMALTGCGGDDGNDGNSGNPGGPAADYINTLNLKVTDVTYTD
CCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHEEEEEEEEEEEECC
GVPTINVFATNEEDLPVVGLTALEVKKVVQLIPQGATGAGNSAEWQATYSSPRNDAEKLK
CCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHCC
PVDLKNGNYSFTIPVEGYNSELTQRYNVIASASTLADGETSVPRTELSQDFSGEGYEATY
CEEECCCCEEEEEEECCCCHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEE
TKDVVATASCTSCHAEGKKIYHGYTSSETCAACHTQEMADEKGKPHVAYNFLIHNVHNNI
CCCEEEECCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCH
EEAHLPDDEKQNESAEKAYALIQDNCTTCHIAPTEDSNELTEWGNWSSVPTMETCTSCHT
HHHCCCCCHHCCCHHHHHHHHEECCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHC
GIDFVAGKGHSQQADNSNCIACHSASWTEELHNEGFAQKKAFIEQYGMVASLTAVKTDTG
CCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHCCEEEEEEEECCCC
SDTTLSVTITDAAGSAIDATAIVDKIEQLETITNVGPNYPIMGYKPNPINGTEKVVINLT
CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEEEE
EADIVDGKFVTVIKDLPYGDAKTDTDTAFTLIGLSLCNDGETAVKCEEGVSHTSVKAAMA
CCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHH
HGTLSGEAPSVRHTDSVNFKACESCHGTEWELHEKYHAGFVMTEQLGRENADGETVVGVD
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCEEEEHHHCCCCCCCCEEEEEC
ACATCHTPDGVGYSGNSLALEMRLHKTHKQGDYAVIAGMNCDQCHSDFNRDAFKNKGAIE
CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHCCHHHHCCCCCEE
TSSGAYSTPIAATCVSCHSYNLDSFKAHAEGQGAIVNNSEMTKQQISDAAQLETCFYCHK
ECCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCEEECCHHHHHHHHHHHHHHHHEEEECC
PTADDHTSVKM
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA