Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962518

Identifier: 157962518

GI number: 157962518

Start: 3291948

End: 3294185

Strand: Direct

Name: 157962518

Synonym: Spea_2697

Alternate gene names: NA

Gene position: 3291948-3294185 (Clockwise)

Preceding gene: 157962517

Following gene: 157962519

Centisome position: 63.62

GC content: 44.59

Gene sequence:

>2238_bases
ATGATGAACAAATTTAATCTAAGCGCTGCTTCAAAAGCATTGCTTACAGCCGGAGTGCTATCTTTAGCAGTCACAGGTTG
TGGTAGCGATGGCAAAGATGGTAACGATGGTAACGATGGTGTTATCGGCGTAAGCATCGATAATGCGAAAAGTATCAACG
CAATTATGACTGACGCGACAGTTGATGCGGGTACCGTAACTGTTGATTTCAAACTTGAGAATGACAATGGTGTAGCTATT
ATTGATTTAGATTTAGCTAAAGAAGGTCTTGAACTCAACTTTGGCATCGCCCAGTTATCTCAAATCACAGAATTGATGGG
TGAAACTGAAGTTGATAGAGGTTTCCAGTGGCAAGCTTATATCAATTCAGAGAAGACTCCGAATCCTGACTACGCTCCAG
AAGATGATTCAAACATCAAACCATCTAATCAATTTCAAGCGAATGTAGAAAGTGCTGCTTCAAGTTGTGAAACTTGCTTC
GTTGATAACGGTGACGGCTCTTACAGCTACACGTTTAAGCAAAATATCGCCGATGTAACCACACCTGTAACTGTGGCTTT
CAACGCCGAAAACACACAGCGTGCAACACTTGAGCTTGAGCTTGAACGTGGTAGCCAGAAAATTGCTGCAAATGCACACT
TCGATTGGCAGCCATCTACAGGTATGACAGATGGCATTCAAACTCGTAACGTGGTTGCAATTGAAACCTGTTACACATGT
CACCAACCAGAAAGCCTTGCTTTCCATGGTGGTAAGCGCATCGACCTAGAAAACTGTGCCTCTTGTCATACAGCGACTTC
AGGTGATCCAGAGACGGGCAACAGCATCGACTTTACCTACATGATCCATGCGATTCATAAAGGTAGTGACAGAATGATCA
GCACAGCTGAAGGCATGGTTCCAGCGCCTTACAAAGTCATTGGCTACAAAGGTGGTGTACACGATTACGGTGATGTTAAA
TACCCACAAAACCCTGCAGCTGATTGTGCAGCGTGTCACGTTGAAGGCGAAAGTGCACCTGCTGACGCAGACCTATTTAC
AGCTGACTTGAGCAACACAGCTTGTATCGGTTGTCACACCGAAAAACCTTCTCAAATGCACTCAAGCACAAACTGTATGT
CTTGTCACGTTGAAGGCGGCTACGCTAGAAGTGGCGAAGAAGCTCATGGCGATGCAACCAAGCGTTACAAAGAAAGCCAA
GGCTATTCAGCTAAATTTACCGATGTTAAAGTAACAGACGGTGTACTGACTTTCGATGTGCAAATTCTTAACGAAAAAGA
TGAGCCGGTAGCTAGAGAGTTTATCGCCAACCCAAGCTCACACACGAAATCTAGCGTCTACTTCTCTTGGGATATTGAAA
AGGACTACCCTGCTTACACCGATAGTACTAAATACAGTTCAAGAAACTTTGCTCTAACCTATGTCAAAGATTATAACGCT
GACACTAAAACGTTCAGCGTCAATAGTTCAGTTGACAATCCTAAGTTAGTTCTTCCTGAAGAGCTAAATGGTAAGAGTGT
TGAACTATATGCAGCTGTAGCCACTTGCTTCAAAGATGGCGGTTACGGTCGTCCATTGGTTGAGCCTATCGCATGTAAAT
ATGATGAAACGAACCCAGATAGCCCTAAGTTGTTAACATCTCACGCCTATATTCAAGATGAGCCATTACGCTTCACTTGG
AATGGTACTGACACAACTAAAGCCGCTAAAGAACGTCGTGAAATCATCGATAGCGCTAAGTGTATGGGTTGCCACAATCA
AGAGATCGTGCACTTTGACAACGGTGTAAATTGCCAGGCGTGCCATACTCCTGACAAAGGTTTAAATAAATGGGGTGGTA
ATGTACCAACAAGCTTTGCCTATAAAGCGCATAAAGCTGACGGTCACTACCTGAAAGGTTCTGGCACGATTCTGAAGTCT
GACTGTTCTACATGTCATACGGCAGATGGCATCAAGTTAGGACGCGCAGCAGACCGCGTTTGGCAAGATGTTAACGCTGA
AGGCGAAGCAGTTTGGGCTTCATCAGACGCTGGTGCATGTTTAACTTGTCACCGTCCAACCGATCCTTGGTTTAAAGAGT
CTACTCGTGCTCACATCGAAAGCTTCGGTGGTGTACTAGATGCTGACAGCGCAGATAAAGCAAAACCTGCATCAGTAGAC
AATCTGGCTGGTCTTGCAAATGAAAGCTGCTCGACTTGTCACTCTCCAGAACAAGTAATGCAAGCACACGGTCACTAG

Upstream 100 bases:

>100_bases
TTGGAAATAAAATTCCACACACTAATTGCGGTTAAATGAGAGTTGTTCTCATATAAAACCTGCAGTTAGTGATGATTAAA
AACTATTGCAGGGACATAAA

Downstream 100 bases:

>100_bases
AAATTAATCGATTAATTTTCATTACCGTTTAATCATAAAGGGAGGCTTAGCCTCCCTTTTTATTTGCAATTTGACAGTCT
CGTTCTGAGAAACGATTGCC

Product: decaheme cytochrome c

Products: NA

Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; Decaheme Cytochrome C-Like Protein

Number of amino acids: Translated: 745; Mature: 745

Protein sequence:

>745_residues
MMNKFNLSAASKALLTAGVLSLAVTGCGSDGKDGNDGNDGVIGVSIDNAKSINAIMTDATVDAGTVTVDFKLENDNGVAI
IDLDLAKEGLELNFGIAQLSQITELMGETEVDRGFQWQAYINSEKTPNPDYAPEDDSNIKPSNQFQANVESAASSCETCF
VDNGDGSYSYTFKQNIADVTTPVTVAFNAENTQRATLELELERGSQKIAANAHFDWQPSTGMTDGIQTRNVVAIETCYTC
HQPESLAFHGGKRIDLENCASCHTATSGDPETGNSIDFTYMIHAIHKGSDRMISTAEGMVPAPYKVIGYKGGVHDYGDVK
YPQNPAADCAACHVEGESAPADADLFTADLSNTACIGCHTEKPSQMHSSTNCMSCHVEGGYARSGEEAHGDATKRYKESQ
GYSAKFTDVKVTDGVLTFDVQILNEKDEPVAREFIANPSSHTKSSVYFSWDIEKDYPAYTDSTKYSSRNFALTYVKDYNA
DTKTFSVNSSVDNPKLVLPEELNGKSVELYAAVATCFKDGGYGRPLVEPIACKYDETNPDSPKLLTSHAYIQDEPLRFTW
NGTDTTKAAKERREIIDSAKCMGCHNQEIVHFDNGVNCQACHTPDKGLNKWGGNVPTSFAYKAHKADGHYLKGSGTILKS
DCSTCHTADGIKLGRAADRVWQDVNAEGEAVWASSDAGACLTCHRPTDPWFKESTRAHIESFGGVLDADSADKAKPASVD
NLAGLANESCSTCHSPEQVMQAHGH

Sequences:

>Translated_745_residues
MMNKFNLSAASKALLTAGVLSLAVTGCGSDGKDGNDGNDGVIGVSIDNAKSINAIMTDATVDAGTVTVDFKLENDNGVAI
IDLDLAKEGLELNFGIAQLSQITELMGETEVDRGFQWQAYINSEKTPNPDYAPEDDSNIKPSNQFQANVESAASSCETCF
VDNGDGSYSYTFKQNIADVTTPVTVAFNAENTQRATLELELERGSQKIAANAHFDWQPSTGMTDGIQTRNVVAIETCYTC
HQPESLAFHGGKRIDLENCASCHTATSGDPETGNSIDFTYMIHAIHKGSDRMISTAEGMVPAPYKVIGYKGGVHDYGDVK
YPQNPAADCAACHVEGESAPADADLFTADLSNTACIGCHTEKPSQMHSSTNCMSCHVEGGYARSGEEAHGDATKRYKESQ
GYSAKFTDVKVTDGVLTFDVQILNEKDEPVAREFIANPSSHTKSSVYFSWDIEKDYPAYTDSTKYSSRNFALTYVKDYNA
DTKTFSVNSSVDNPKLVLPEELNGKSVELYAAVATCFKDGGYGRPLVEPIACKYDETNPDSPKLLTSHAYIQDEPLRFTW
NGTDTTKAAKERREIIDSAKCMGCHNQEIVHFDNGVNCQACHTPDKGLNKWGGNVPTSFAYKAHKADGHYLKGSGTILKS
DCSTCHTADGIKLGRAADRVWQDVNAEGEAVWASSDAGACLTCHRPTDPWFKESTRAHIESFGGVLDADSADKAKPASVD
NLAGLANESCSTCHSPEQVMQAHGH
>Mature_745_residues
MMNKFNLSAASKALLTAGVLSLAVTGCGSDGKDGNDGNDGVIGVSIDNAKSINAIMTDATVDAGTVTVDFKLENDNGVAI
IDLDLAKEGLELNFGIAQLSQITELMGETEVDRGFQWQAYINSEKTPNPDYAPEDDSNIKPSNQFQANVESAASSCETCF
VDNGDGSYSYTFKQNIADVTTPVTVAFNAENTQRATLELELERGSQKIAANAHFDWQPSTGMTDGIQTRNVVAIETCYTC
HQPESLAFHGGKRIDLENCASCHTATSGDPETGNSIDFTYMIHAIHKGSDRMISTAEGMVPAPYKVIGYKGGVHDYGDVK
YPQNPAADCAACHVEGESAPADADLFTADLSNTACIGCHTEKPSQMHSSTNCMSCHVEGGYARSGEEAHGDATKRYKESQ
GYSAKFTDVKVTDGVLTFDVQILNEKDEPVAREFIANPSSHTKSSVYFSWDIEKDYPAYTDSTKYSSRNFALTYVKDYNA
DTKTFSVNSSVDNPKLVLPEELNGKSVELYAAVATCFKDGGYGRPLVEPIACKYDETNPDSPKLLTSHAYIQDEPLRFTW
NGTDTTKAAKERREIIDSAKCMGCHNQEIVHFDNGVNCQACHTPDKGLNKWGGNVPTSFAYKAHKADGHYLKGSGTILKS
DCSTCHTADGIKLGRAADRVWQDVNAEGEAVWASSDAGACLTCHRPTDPWFKESTRAHIESFGGVLDADSADKAKPASVD
NLAGLANESCSTCHSPEQVMQAHGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80344; Mature: 80344

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKFNLSAASKALLTAGVLSLAVTGCGSDGKDGNDGNDGVIGVSIDNAKSINAIMTDAT
CCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCE
VDAGTVTVDFKLENDNGVAIIDLDLAKEGLELNFGIAQLSQITELMGETEVDRGFQWQAY
ECCCEEEEEEEEECCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHCCCCCCCCEEEEEE
INSEKTPNPDYAPEDDSNIKPSNQFQANVESAASSCETCFVDNGDGSYSYTFKQNIADVT
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCC
TPVTVAFNAENTQRATLELELERGSQKIAANAHFDWQPSTGMTDGIQTRNVVAIETCYTC
CCEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
HQPESLAFHGGKRIDLENCASCHTATSGDPETGNSIDFTYMIHAIHKGSDRMISTAEGMV
CCCCCEEECCCCEECHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCC
PAPYKVIGYKGGVHDYGDVKYPQNPAADCAACHVEGESAPADADLFTADLSNTACIGCHT
CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEEECC
EKPSQMHSSTNCMSCHVEGGYARSGEEAHGDATKRYKESQGYSAKFTDVKVTDGVLTFDV
CCCHHHHCCCCEEEEEECCCCCCCCCHHCCCHHHHHHHCCCCCEEEEEEEEECCEEEEEE
QILNEKDEPVAREFIANPSSHTKSSVYFSWDIEKDYPAYTDSTKYSSRNFALTYVKDYNA
EEECCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCC
DTKTFSVNSSVDNPKLVLPEELNGKSVELYAAVATCFKDGGYGRPLVEPIACKYDETNPD
CCEEEEECCCCCCCEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHEECCCCCCCC
SPKLLTSHAYIQDEPLRFTWNGTDTTKAAKERREIIDSAKCMGCHNQEIVHFDNGVNCQA
CCCEEEEECEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEE
CHTPDKGLNKWGGNVPTSFAYKAHKADGHYLKGSGTILKSDCSTCHTADGIKLGRAADRV
CCCCCHHHHHCCCCCCCCCEEEEECCCCCEECCCCCEEECCCCCCCCCCCCCHHHHHHHH
WQDVNAEGEAVWASSDAGACLTCHRPTDPWFKESTRAHIESFGGVLDADSADKAKPASVD
HHHCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCHH
NLAGLANESCSTCHSPEQVMQAHGH
HHHHHCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MMNKFNLSAASKALLTAGVLSLAVTGCGSDGKDGNDGNDGVIGVSIDNAKSINAIMTDAT
CCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCE
VDAGTVTVDFKLENDNGVAIIDLDLAKEGLELNFGIAQLSQITELMGETEVDRGFQWQAY
ECCCEEEEEEEEECCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHCCCCCCCCEEEEEE
INSEKTPNPDYAPEDDSNIKPSNQFQANVESAASSCETCFVDNGDGSYSYTFKQNIADVT
ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCC
TPVTVAFNAENTQRATLELELERGSQKIAANAHFDWQPSTGMTDGIQTRNVVAIETCYTC
CCEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
HQPESLAFHGGKRIDLENCASCHTATSGDPETGNSIDFTYMIHAIHKGSDRMISTAEGMV
CCCCCEEECCCCEECHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCC
PAPYKVIGYKGGVHDYGDVKYPQNPAADCAACHVEGESAPADADLFTADLSNTACIGCHT
CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEEECC
EKPSQMHSSTNCMSCHVEGGYARSGEEAHGDATKRYKESQGYSAKFTDVKVTDGVLTFDV
CCCHHHHCCCCEEEEEECCCCCCCCCHHCCCHHHHHHHCCCCCEEEEEEEEECCEEEEEE
QILNEKDEPVAREFIANPSSHTKSSVYFSWDIEKDYPAYTDSTKYSSRNFALTYVKDYNA
EEECCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCC
DTKTFSVNSSVDNPKLVLPEELNGKSVELYAAVATCFKDGGYGRPLVEPIACKYDETNPD
CCEEEEECCCCCCCEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHEECCCCCCCC
SPKLLTSHAYIQDEPLRFTWNGTDTTKAAKERREIIDSAKCMGCHNQEIVHFDNGVNCQA
CCCEEEEECEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEE
CHTPDKGLNKWGGNVPTSFAYKAHKADGHYLKGSGTILKSDCSTCHTADGIKLGRAADRV
CCCCCHHHHHCCCCCCCCCEEEEECCCCCEECCCCCEEECCCCCCCCCCCCCHHHHHHHH
WQDVNAEGEAVWASSDAGACLTCHRPTDPWFKESTRAHIESFGGVLDADSADKAKPASVD
HHHCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCHH
NLAGLANESCSTCHSPEQVMQAHGH
HHHHHCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA