| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962517
Identifier: 157962517
GI number: 157962517
Start: 3289024
End: 3291492
Strand: Direct
Name: 157962517
Synonym: Spea_2696
Alternate gene names: NA
Gene position: 3289024-3291492 (Clockwise)
Preceding gene: 157962516
Following gene: 157962518
Centisome position: 63.56
GC content: 45.61
Gene sequence:
>2469_bases ATGATGAATCAAAATAAAATTAAATATGCTGTCAAATCAGCCATTGGCCTAAGTATGCTCTCAGTAGCACTTGTGGGTTG TGGCAGTGACGGCAAAGATGGTGAAGACGGTGAGAATGGCAATATAGGTGTCGATATCCAACAAGCCACTAGCTTGCAAG CCAATATCCTCCATGCCACAGTGACCGACGGTATTGTTGCGGTTGACTTTAAACTGGAAAATGCCAACGGCGTAGTGGTA TCTGGCTTAGAGTCATTCGATGACATTAACACTTTAGGTTTTGGTATCGCTAAGCTTGATGCACTGCAAAAGCGTGACAT GCATGCTTTAGGGCAGCCTGTTACGCCTGAACAGTTTAAAGGAGTAAAACCCACTCAATGGACTAGCTATATTAACACGG TGAAGAGTGCCAACTTAGAGCACATTCCAGAGGGTTACAACCATCTTGCGGGCGACCAAATCCAAGCCAACATTGAGACC AGCTGTAAAACAGAATGTATTGAGGTGCTAGAGCATGGCACTTACCGCTATACCTTTTCAAAAGCACTTTCAGAATATGA GCAGATAGAAGCAGTCAATACAGAGTTTAATGCAGAGCTCACACACCGTGTCACATTAGAGCTTAAACCAACAAGTACAT TTAGCGCTGCCACTTTGATTAACACTCATTATGATTTTGTGCCTGCACTCGATCGTGCTTCCGAAGCTGATGAAACTCGT AACCTTGTAGATCTACAAGAGTCATGTATCCGCTGCCATAGCGATGACTATGATTCTGCAGCATCAAAACTGATGATGCA TGGCAGCAAACGCATTGAAATTGAGAACTGCGTAGTCTGTCATACCTCCTATTCTGGCGATCCTGAAACTGGCGCGACCA TTGACTTTGGCTCAATGCTGCATCGCATCCATGACGGCACTTACCTCATGGCAGGATACGGCGGTAGTGTACATGATTAC ACTGGCACCACTTTCCCAACCGATATGGGTAATTGCCAGACCTGCCATATCAATGAGAACCACTCTCCAGCGCAAGCTGA AAACTTCCAGTTCCATCGCCAAGAAGCCTGTGCATCTTGTCATATGGCCGACTTCAATCCGGTCAATAATGCCGAGTGGC TCACTCCACCAGGAGAAAGCAAAGATCGCGGCTTTGTCGGTAACTACTTTCACTACTATGCAACACCAGAGCTCGATGGT GTAGAAGGTGCAGATGTTCGTGGCGTGTTTGAAAATCAGTCTTGCTCAAGCTGCCATGCCGACGATAGTAATCCGCAAGG CGCGGCTATATTCCATATGGCTAAAGCCAATGAGACTATAGATGTTCGTGAGCAATATGCTTACGAGTTGAGTAATGGTG TATTCGATGCTGAAGCAGGCACACTTGAGTTTACGCTAACTTGGGATCGCGAGCAGCCTCCACATGAAGACAGCGCTATC AATGCTTTCTGGATCAACATTCAGGCTTTCGATGGTATTGAACTTGTTATGGGTCCTAGACCTGACAACGGGCCTTTGGG ACGTTCAGAGTCAAGAATATCAATGAATCTGACTGGATTAGAGAGCAATGAAAACTTAGCAGCAATTATTGAAGGAAGCT CTATAACCTACACGATCAGCGGGATTACTTCAGATAGTATACACACTCAAATATCTGATTTAGGTCAGGGATTCATTGAT GGCAAGTTGATGGTCTGCGCACAAGGCAGCGAAAGAGTTCCAGCTCCTACAGCAACGATTGATTGCGAACGCTTAGAAAG CGATCCATACAATTTTGAACTTGCAGTAAAAGGTAACAAAGCTTCTTTCTCTGTAGATGGTAGCAGTATCAATATGCGCC CCATTGTTGCCTCAGAAGAAAAATGCGCAGCCTGTCATGGTGAGCAAGCTGACTTCTCTATTTCACATATTGCAAAATAT GCTGATCGCGCACCAGACAATAGCTGTGGTACTTGTCACTCGGCAGAGCCTAACACTGCAGTTAACTTAGCTGATGGTAG CTGCGTAGCCTGTCACAACGGAACTGGCGCTCCAGGCCACAAATACTATGATTTCAGCCAAGGCTTTGACTTCAAGGTTA TGATCCACGGTATTCATTCAGACAATCGTGCTAAATACACTTCAGGTAATGGACGAGATAAAACTCAAGGTGATATCACC TATCCTACAGATGCAGCAGACTGTGCAGCCTGTCATGATCAAGGGCAGTTAACATTAGCTAACCTAGCTGATACTCCTCC AACGCTTTCTAAGGATGGGACTTACTCTCCAACTGTAGCCGCTTGTGCTTCTTGTCACGCACCAACTGCTGAAGGAAATA GTGCAGTCATCAGCCACTTCGAATCAAATGGCGGTGTATATCAAGGTAGTGAAGGCAGTTACCAGTTAGGCAGTGAAAGC TGCGCAACTTGTCACGCTGAAGGGAAATCTTTCGGGGTAGACAAGGTGCACCCGACTAACTACAAATAA
Upstream 100 bases:
>100_bases AAAAGAAGGCTACCTCTTTTGGGTAAGATCGTGTTGAGGAACCCCCTCATGCTAAAAGAGGTATAAACCTCATAGCAGCT AACCTATGCAGGGAAAAATG
Downstream 100 bases:
>100_bases CCTTAAGCATATGCCTTGAACAAGGGCTAATGTTAAAGAGTGTCCCCAAAAGCGAGAAGTTATCTTCTCGCTTTTTTTAT GCCTTAAAAAAAGCAAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; DeCa-Heme C-Type Cytochrome; Deca-Heme C-Type Cytochrome; Decaheme Cytochrome C-Like Protein
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues MMNQNKIKYAVKSAIGLSMLSVALVGCGSDGKDGEDGENGNIGVDIQQATSLQANILHATVTDGIVAVDFKLENANGVVV SGLESFDDINTLGFGIAKLDALQKRDMHALGQPVTPEQFKGVKPTQWTSYINTVKSANLEHIPEGYNHLAGDQIQANIET SCKTECIEVLEHGTYRYTFSKALSEYEQIEAVNTEFNAELTHRVTLELKPTSTFSAATLINTHYDFVPALDRASEADETR NLVDLQESCIRCHSDDYDSAASKLMMHGSKRIEIENCVVCHTSYSGDPETGATIDFGSMLHRIHDGTYLMAGYGGSVHDY TGTTFPTDMGNCQTCHINENHSPAQAENFQFHRQEACASCHMADFNPVNNAEWLTPPGESKDRGFVGNYFHYYATPELDG VEGADVRGVFENQSCSSCHADDSNPQGAAIFHMAKANETIDVREQYAYELSNGVFDAEAGTLEFTLTWDREQPPHEDSAI NAFWINIQAFDGIELVMGPRPDNGPLGRSESRISMNLTGLESNENLAAIIEGSSITYTISGITSDSIHTQISDLGQGFID GKLMVCAQGSERVPAPTATIDCERLESDPYNFELAVKGNKASFSVDGSSINMRPIVASEEKCAACHGEQADFSISHIAKY ADRAPDNSCGTCHSAEPNTAVNLADGSCVACHNGTGAPGHKYYDFSQGFDFKVMIHGIHSDNRAKYTSGNGRDKTQGDIT YPTDAADCAACHDQGQLTLANLADTPPTLSKDGTYSPTVAACASCHAPTAEGNSAVISHFESNGGVYQGSEGSYQLGSES CATCHAEGKSFGVDKVHPTNYK
Sequences:
>Translated_822_residues MMNQNKIKYAVKSAIGLSMLSVALVGCGSDGKDGEDGENGNIGVDIQQATSLQANILHATVTDGIVAVDFKLENANGVVV SGLESFDDINTLGFGIAKLDALQKRDMHALGQPVTPEQFKGVKPTQWTSYINTVKSANLEHIPEGYNHLAGDQIQANIET SCKTECIEVLEHGTYRYTFSKALSEYEQIEAVNTEFNAELTHRVTLELKPTSTFSAATLINTHYDFVPALDRASEADETR NLVDLQESCIRCHSDDYDSAASKLMMHGSKRIEIENCVVCHTSYSGDPETGATIDFGSMLHRIHDGTYLMAGYGGSVHDY TGTTFPTDMGNCQTCHINENHSPAQAENFQFHRQEACASCHMADFNPVNNAEWLTPPGESKDRGFVGNYFHYYATPELDG VEGADVRGVFENQSCSSCHADDSNPQGAAIFHMAKANETIDVREQYAYELSNGVFDAEAGTLEFTLTWDREQPPHEDSAI NAFWINIQAFDGIELVMGPRPDNGPLGRSESRISMNLTGLESNENLAAIIEGSSITYTISGITSDSIHTQISDLGQGFID GKLMVCAQGSERVPAPTATIDCERLESDPYNFELAVKGNKASFSVDGSSINMRPIVASEEKCAACHGEQADFSISHIAKY ADRAPDNSCGTCHSAEPNTAVNLADGSCVACHNGTGAPGHKYYDFSQGFDFKVMIHGIHSDNRAKYTSGNGRDKTQGDIT YPTDAADCAACHDQGQLTLANLADTPPTLSKDGTYSPTVAACASCHAPTAEGNSAVISHFESNGGVYQGSEGSYQLGSES CATCHAEGKSFGVDKVHPTNYK >Mature_822_residues MMNQNKIKYAVKSAIGLSMLSVALVGCGSDGKDGEDGENGNIGVDIQQATSLQANILHATVTDGIVAVDFKLENANGVVV SGLESFDDINTLGFGIAKLDALQKRDMHALGQPVTPEQFKGVKPTQWTSYINTVKSANLEHIPEGYNHLAGDQIQANIET SCKTECIEVLEHGTYRYTFSKALSEYEQIEAVNTEFNAELTHRVTLELKPTSTFSAATLINTHYDFVPALDRASEADETR NLVDLQESCIRCHSDDYDSAASKLMMHGSKRIEIENCVVCHTSYSGDPETGATIDFGSMLHRIHDGTYLMAGYGGSVHDY TGTTFPTDMGNCQTCHINENHSPAQAENFQFHRQEACASCHMADFNPVNNAEWLTPPGESKDRGFVGNYFHYYATPELDG VEGADVRGVFENQSCSSCHADDSNPQGAAIFHMAKANETIDVREQYAYELSNGVFDAEAGTLEFTLTWDREQPPHEDSAI NAFWINIQAFDGIELVMGPRPDNGPLGRSESRISMNLTGLESNENLAAIIEGSSITYTISGITSDSIHTQISDLGQGFID GKLMVCAQGSERVPAPTATIDCERLESDPYNFELAVKGNKASFSVDGSSINMRPIVASEEKCAACHGEQADFSISHIAKY ADRAPDNSCGTCHSAEPNTAVNLADGSCVACHNGTGAPGHKYYDFSQGFDFKVMIHGIHSDNRAKYTSGNGRDKTQGDIT YPTDAADCAACHDQGQLTLANLADTPPTLSKDGTYSPTVAACASCHAPTAEGNSAVISHFESNGGVYQGSEGSYQLGSES CATCHAEGKSFGVDKVHPTNYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88593; Mature: 88593
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNQNKIKYAVKSAIGLSMLSVALVGCGSDGKDGEDGENGNIGVDIQQATSLQANILHAT CCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEHHCCCCEEEEEEEE VTDGIVAVDFKLENANGVVVSGLESFDDINTLGFGIAKLDALQKRDMHALGQPVTPEQFK ECCCEEEEEEEEECCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC GVKPTQWTSYINTVKSANLEHIPEGYNHLAGDQIQANIETSCKTECIEVLEHGTYRYTFS CCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEHH KALSEYEQIEAVNTEFNAELTHRVTLELKPTSTFSAATLINTHYDFVPALDRASEADETR HHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHCCCCHHHHH NLVDLQESCIRCHSDDYDSAASKLMMHGSKRIEIENCVVCHTSYSGDPETGATIDFGSML HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCEEEHHHHH HRIHDGTYLMAGYGGSVHDYTGTTFPTDMGNCQTCHINENHSPAQAENFQFHRQEACASC HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC HMADFNPVNNAEWLTPPGESKDRGFVGNYFHYYATPELDGVEGADVRGVFENQSCSSCHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCC DDSNPQGAAIFHMAKANETIDVREQYAYELSNGVFDAEAGTLEFTLTWDREQPPHEDSAI CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEECCCCEEEEEEEECCCCCCCCCCCE NAFWINIQAFDGIELVMGPRPDNGPLGRSESRISMNLTGLESNENLAAIIEGSSITYTIS EEEEEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCEEEEEEE GITSDSIHTQISDLGQGFIDGKLMVCAQGSERVPAPTATIDCERLESDPYNFELAVKGNK CCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEHHHHCCCCCCEEEEEECCC ASFSVDGSSINMRPIVASEEKCAACHGEQADFSISHIAKYADRAPDNSCGTCHSAEPNTA EEEEECCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCE VNLADGSCVACHNGTGAPGHKYYDFSQGFDFKVMIHGIHSDNRAKYTSGNGRDKTQGDIT EEECCCCEEEEECCCCCCCCCEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCEE YPTDAADCAACHDQGQLTLANLADTPPTLSKDGTYSPTVAACASCHAPTAEGNSAVISHF CCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEE ESNGGVYQGSEGSYQLGSESCATCHAEGKSFGVDKVHPTNYK ECCCCEEECCCCCEECCCCCHHEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MMNQNKIKYAVKSAIGLSMLSVALVGCGSDGKDGEDGENGNIGVDIQQATSLQANILHAT CCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEHHCCCCEEEEEEEE VTDGIVAVDFKLENANGVVVSGLESFDDINTLGFGIAKLDALQKRDMHALGQPVTPEQFK ECCCEEEEEEEEECCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC GVKPTQWTSYINTVKSANLEHIPEGYNHLAGDQIQANIETSCKTECIEVLEHGTYRYTFS CCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEHH KALSEYEQIEAVNTEFNAELTHRVTLELKPTSTFSAATLINTHYDFVPALDRASEADETR HHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHCCCCHHHHH NLVDLQESCIRCHSDDYDSAASKLMMHGSKRIEIENCVVCHTSYSGDPETGATIDFGSML HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCEEEHHHHH HRIHDGTYLMAGYGGSVHDYTGTTFPTDMGNCQTCHINENHSPAQAENFQFHRQEACASC HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC HMADFNPVNNAEWLTPPGESKDRGFVGNYFHYYATPELDGVEGADVRGVFENQSCSSCHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCC DDSNPQGAAIFHMAKANETIDVREQYAYELSNGVFDAEAGTLEFTLTWDREQPPHEDSAI CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEECCCCEEEEEEEECCCCCCCCCCCE NAFWINIQAFDGIELVMGPRPDNGPLGRSESRISMNLTGLESNENLAAIIEGSSITYTIS EEEEEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCEEEEEEE GITSDSIHTQISDLGQGFIDGKLMVCAQGSERVPAPTATIDCERLESDPYNFELAVKGNK CCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEHHHHCCCCCCEEEEEECCC ASFSVDGSSINMRPIVASEEKCAACHGEQADFSISHIAKYADRAPDNSCGTCHSAEPNTA EEEEECCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCE VNLADGSCVACHNGTGAPGHKYYDFSQGFDFKVMIHGIHSDNRAKYTSGNGRDKTQGDIT EEECCCCEEEEECCCCCCCCCEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCEE YPTDAADCAACHDQGQLTLANLADTPPTLSKDGTYSPTVAACASCHAPTAEGNSAVISHF CCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEE ESNGGVYQGSEGSYQLGSESCATCHAEGKSFGVDKVHPTNYK ECCCCEEECCCCCEECCCCCHHEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA