Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962516

Identifier: 157962516

GI number: 157962516

Start: 3286358

End: 3288517

Strand: Direct

Name: 157962516

Synonym: Spea_2695

Alternate gene names: NA

Gene position: 3286358-3288517 (Clockwise)

Preceding gene: 157962515

Following gene: 157962517

Centisome position: 63.51

GC content: 48.8

Gene sequence:

>2160_bases
ATGGAACGCAAAATTATGGATAAGAAAATTAAACACTTAAAACTGAGTTTAATTGCGATCACCGCTTCAGCCCTGCTTTT
TGGTTGTAGCGATGGCAATGACGGCGCTGATGGTAAAGATGGTGTCGTTGGCGTTGATATTGATTCAACCTCCAGCATTC
AGGCGCAGTTTACCGAAGCCAGCGTGACAGACGGTTTGGTCACGGTTAACTTTAACCTTGAAAACGCAAATGGCGTTGCT
GTATTAGGCCTAGATAAAGACAATGACTTGCGCTTTGGCATCGCCCAACTCGCTAAAGTCAGCGAGACCATCGATGAAGT
CGAATACGACCGAGGTTATCAATGGCAAGCCTACAATAATGCCCTTAAAGAGCCTGGCACCCCGCCGGATGACAGCAGCG
ACCTTAATCCTTCTCCACAATATCAAGCCGATGTTGAGGCTGCGAGCGCCTGTGAAGACTGCTTAGTAGATAATGGCGAT
GGTAGCTATTCTTATACTTTCCAGCAGAACATCGCTAATGTGACAGAGCCGCTGGCAATCACCTATGGCGAAGACAATAC
CCATAGGGTAACGATGGAATTGAAGTTGCCACAAGCCACGGCAAACGCCCACCATGATTGGCAGCCATCAACAGGTGCAA
TCACAGATATTCAAATCCGTAACGTGGTAAGCATAGAAACCTGTTACACCTGCCATCAACCAGAAAGCCTTGAGCTTCAT
GGCGGTCGGCGTATCGCGCTTGAGAACTGTGCTAGCTGTCATACCTCAACTTCTGGCGATCCTGAAAGTGGCAACAGCGT
CGATTTTACTTACATGATCCACGCCATCCATAAAGGCCAAGACAGAGAAACCAGTACTGCCGATGGCATGGTGCCAGCAC
CGTACAAAATAGTTGGTTACGGCGGCAGCGTGCATGATTATGGCAAGGTGATGTTCCCTCAAAAGCCTGCTGCTAATTGC
GCCTCTTGTCACGTTGAAGGTGAAGGCGCTCCCGCGAATGCCGATCTATTCAAAGCCGACCTCAGTAATACGGCTTGCGT
AAGTTGCCACACAGAGAAGCCATCTCAAACTCACAGCAGTACTAACTGTGTATCTTGCCATAACTCAACCGATACCTATC
GCGGCACAGGCAGCGCTGAGAAACGTCACGGCGACTTATTAAAAGCCTACACTGAAGCTGAAGCCATGGGGGTTATGTTT
AGCAATATAGGCTTAGATACTAGCGGTAAACTGAAGTTTGATGTGCAAATCCAAGACAGCAGTGGCGAAGCTGTTGGCTC
TGAGTTTATCGAAACGGGCACCCGCGTCATAGTGGCATGGGACACAGATAAAGACTTCCCAGCTTATGCTGACGCGTCGT
ACTCAAACCGCCGCTTCAAGCTTGAAGACGGCACATACGACAGCGCCGCTAAGACCTTCACTATTATTGCAAGCACATTC
GATATGCCAAGCGATGCTGACGGCAAGACCTTTGAGCTTTGGTCTACGGTTGAAGTTTGCTTCAATAGCGGCGGATATTT
AGTTGAATCGATCCAAATGACAGAGTGCTCAGACAAGACCCGCTCAGTTGCCGTAAAAGAAGCACCCTACCACTTTGTTT
GGTCAGGCTCAGGTGTTGATGACACCATGCAAGCCGCGATGCGCCGCTCAATTATCGACGCAGCTAAGTGCCAGAGCTGT
CACAATCAAGAGAACTATCATTACAACAATGGTTATAACTGTCAGACCTGCCACACTTCTGATAAAACAACCAAAACCGA
TGATAGTTACCCGGGCGGTAAAAAACCAACCAGCTATGCATTTAAAGCCCACGAAGCCGATGGTCACTACCTAAAATATG
CTGGGGTTCAATCGGGGACGGTACTTAAAACTGATTGCTCAACCTGTCACACCACAGACGGCATTCAGTTAGGCCGAGCG
AGTGATAGAGTGTGGCGCTATGGTGATACAACCACCGGGACCGATATTTGGGTCTCTTCCGATGCAGGCGCTTGTCTAAG
TTGCCACCAAAAGTACTTAAGTGACTCAGGTGCAAACCATATTGTCGCCAACGGTGGTATTCTCGATGGCATGAGTGCAG
CAGATGTGAATACTCGCTCCGCTGAAGCCTGCTCGACCTGTCATAATCCAGCGCAGTTAATGGAACTCCACGGCAACTAA

Upstream 100 bases:

>100_bases
CTTTAGGGCTGCACATTTTGTGATGAGAAACGATTTGTGACGCAAATAATTAGTGCCAGAAACAAGTGGCAAAACTAATT
ACAAAACTAATTACAAAGTA

Downstream 100 bases:

>100_bases
ATTATCCACTTGCCTGACGATGAAATAAAAGGAGGCTTTAGCCTCCTTTTTTATTGTGCCAAATTCAATGCAATGACTAG
CCAACAGGTTTAGTTAACAT

Product: decaheme cytochrome c

Products: NA

Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; Decaheme Cytochrome C-Like Protein

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MERKIMDKKIKHLKLSLIAITASALLFGCSDGNDGADGKDGVVGVDIDSTSSIQAQFTEASVTDGLVTVNFNLENANGVA
VLGLDKDNDLRFGIAQLAKVSETIDEVEYDRGYQWQAYNNALKEPGTPPDDSSDLNPSPQYQADVEAASACEDCLVDNGD
GSYSYTFQQNIANVTEPLAITYGEDNTHRVTMELKLPQATANAHHDWQPSTGAITDIQIRNVVSIETCYTCHQPESLELH
GGRRIALENCASCHTSTSGDPESGNSVDFTYMIHAIHKGQDRETSTADGMVPAPYKIVGYGGSVHDYGKVMFPQKPAANC
ASCHVEGEGAPANADLFKADLSNTACVSCHTEKPSQTHSSTNCVSCHNSTDTYRGTGSAEKRHGDLLKAYTEAEAMGVMF
SNIGLDTSGKLKFDVQIQDSSGEAVGSEFIETGTRVIVAWDTDKDFPAYADASYSNRRFKLEDGTYDSAAKTFTIIASTF
DMPSDADGKTFELWSTVEVCFNSGGYLVESIQMTECSDKTRSVAVKEAPYHFVWSGSGVDDTMQAAMRRSIIDAAKCQSC
HNQENYHYNNGYNCQTCHTSDKTTKTDDSYPGGKKPTSYAFKAHEADGHYLKYAGVQSGTVLKTDCSTCHTTDGIQLGRA
SDRVWRYGDTTTGTDIWVSSDAGACLSCHQKYLSDSGANHIVANGGILDGMSAADVNTRSAEACSTCHNPAQLMELHGN

Sequences:

>Translated_719_residues
MERKIMDKKIKHLKLSLIAITASALLFGCSDGNDGADGKDGVVGVDIDSTSSIQAQFTEASVTDGLVTVNFNLENANGVA
VLGLDKDNDLRFGIAQLAKVSETIDEVEYDRGYQWQAYNNALKEPGTPPDDSSDLNPSPQYQADVEAASACEDCLVDNGD
GSYSYTFQQNIANVTEPLAITYGEDNTHRVTMELKLPQATANAHHDWQPSTGAITDIQIRNVVSIETCYTCHQPESLELH
GGRRIALENCASCHTSTSGDPESGNSVDFTYMIHAIHKGQDRETSTADGMVPAPYKIVGYGGSVHDYGKVMFPQKPAANC
ASCHVEGEGAPANADLFKADLSNTACVSCHTEKPSQTHSSTNCVSCHNSTDTYRGTGSAEKRHGDLLKAYTEAEAMGVMF
SNIGLDTSGKLKFDVQIQDSSGEAVGSEFIETGTRVIVAWDTDKDFPAYADASYSNRRFKLEDGTYDSAAKTFTIIASTF
DMPSDADGKTFELWSTVEVCFNSGGYLVESIQMTECSDKTRSVAVKEAPYHFVWSGSGVDDTMQAAMRRSIIDAAKCQSC
HNQENYHYNNGYNCQTCHTSDKTTKTDDSYPGGKKPTSYAFKAHEADGHYLKYAGVQSGTVLKTDCSTCHTTDGIQLGRA
SDRVWRYGDTTTGTDIWVSSDAGACLSCHQKYLSDSGANHIVANGGILDGMSAADVNTRSAEACSTCHNPAQLMELHGN
>Mature_719_residues
MERKIMDKKIKHLKLSLIAITASALLFGCSDGNDGADGKDGVVGVDIDSTSSIQAQFTEASVTDGLVTVNFNLENANGVA
VLGLDKDNDLRFGIAQLAKVSETIDEVEYDRGYQWQAYNNALKEPGTPPDDSSDLNPSPQYQADVEAASACEDCLVDNGD
GSYSYTFQQNIANVTEPLAITYGEDNTHRVTMELKLPQATANAHHDWQPSTGAITDIQIRNVVSIETCYTCHQPESLELH
GGRRIALENCASCHTSTSGDPESGNSVDFTYMIHAIHKGQDRETSTADGMVPAPYKIVGYGGSVHDYGKVMFPQKPAANC
ASCHVEGEGAPANADLFKADLSNTACVSCHTEKPSQTHSSTNCVSCHNSTDTYRGTGSAEKRHGDLLKAYTEAEAMGVMF
SNIGLDTSGKLKFDVQIQDSSGEAVGSEFIETGTRVIVAWDTDKDFPAYADASYSNRRFKLEDGTYDSAAKTFTIIASTF
DMPSDADGKTFELWSTVEVCFNSGGYLVESIQMTECSDKTRSVAVKEAPYHFVWSGSGVDDTMQAAMRRSIIDAAKCQSC
HNQENYHYNNGYNCQTCHTSDKTTKTDDSYPGGKKPTSYAFKAHEADGHYLKYAGVQSGTVLKTDCSTCHTTDGIQLGRA
SDRVWRYGDTTTGTDIWVSSDAGACLSCHQKYLSDSGANHIVANGGILDGMSAADVNTRSAEACSTCHNPAQLMELHGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77536; Mature: 77536

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC ; PS51008 MULTIHEME_CYTC ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKIMDKKIKHLKLSLIAITASALLFGCSDGNDGADGKDGVVGVDIDSTSSIQAQFTEA
CCCCHHHHHHHHHEEEHHEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEC
SVTDGLVTVNFNLENANGVAVLGLDKDNDLRFGIAQLAKVSETIDEVEYDRGYQWQAYNN
CCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHH
ALKEPGTPPDDSSDLNPSPQYQADVEAASACEDCLVDNGDGSYSYTFQQNIANVTEPLAI
HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCEEEEEHHHHHCCCCCEEE
TYGEDNTHRVTMELKLPQATANAHHDWQPSTGAITDIQIRNVVSIETCYTCHQPESLELH
EECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCEEEC
GGRRIALENCASCHTSTSGDPESGNSVDFTYMIHAIHKGQDRETSTADGMVPAPYKIVGY
CCCEEEEHHHHHHCCCCCCCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCCCEEEEEC
GGSVHDYGKVMFPQKPAANCASCHVEGEGAPANADLFKADLSNTACVSCHTEKPSQTHSS
CCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCHHEEECCCCCEEEEEECCCCCCCCCC
TNCVSCHNSTDTYRGTGSAEKRHGDLLKAYTEAEAMGVMFSNIGLDTSGKLKFDVQIQDS
CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEECC
SGEAVGSEFIETGTRVIVAWDTDKDFPAYADASYSNRRFKLEDGTYDSAAKTFTIIASTF
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEC
DMPSDADGKTFELWSTVEVCFNSGGYLVESIQMTECSDKTRSVAVKEAPYHFVWSGSGVD
CCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEEECCCCCHHHEEEEECCCEEEEEECCCCC
DTMQAAMRRSIIDAAKCQSCHNQENYHYNNGYNCQTCHTSDKTTKTDDSYPGGKKPTSYA
HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEE
FKAHEADGHYLKYAGVQSGTVLKTDCSTCHTTDGIQLGRASDRVWRYGDTTTGTDIWVSS
EEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCEEECCCCCCEEECCCCCCCCEEEEEC
DAGACLSCHQKYLSDSGANHIVANGGILDGMSAADVNTRSAEACSTCHNPAQLMELHGN
CCCHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCCCCHHHHHHCCCHHHHHEECCC
>Mature Secondary Structure
MERKIMDKKIKHLKLSLIAITASALLFGCSDGNDGADGKDGVVGVDIDSTSSIQAQFTEA
CCCCHHHHHHHHHEEEHHEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEC
SVTDGLVTVNFNLENANGVAVLGLDKDNDLRFGIAQLAKVSETIDEVEYDRGYQWQAYNN
CCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHH
ALKEPGTPPDDSSDLNPSPQYQADVEAASACEDCLVDNGDGSYSYTFQQNIANVTEPLAI
HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCEEEEEHHHHHCCCCCEEE
TYGEDNTHRVTMELKLPQATANAHHDWQPSTGAITDIQIRNVVSIETCYTCHQPESLELH
EECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCEEEC
GGRRIALENCASCHTSTSGDPESGNSVDFTYMIHAIHKGQDRETSTADGMVPAPYKIVGY
CCCEEEEHHHHHHCCCCCCCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCCCEEEEEC
GGSVHDYGKVMFPQKPAANCASCHVEGEGAPANADLFKADLSNTACVSCHTEKPSQTHSS
CCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCHHEEECCCCCEEEEEECCCCCCCCCC
TNCVSCHNSTDTYRGTGSAEKRHGDLLKAYTEAEAMGVMFSNIGLDTSGKLKFDVQIQDS
CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEECC
SGEAVGSEFIETGTRVIVAWDTDKDFPAYADASYSNRRFKLEDGTYDSAAKTFTIIASTF
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEC
DMPSDADGKTFELWSTVEVCFNSGGYLVESIQMTECSDKTRSVAVKEAPYHFVWSGSGVD
CCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEEECCCCCHHHEEEEECCCEEEEEECCCCC
DTMQAAMRRSIIDAAKCQSCHNQENYHYNNGYNCQTCHTSDKTTKTDDSYPGGKKPTSYA
HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEE
FKAHEADGHYLKYAGVQSGTVLKTDCSTCHTTDGIQLGRASDRVWRYGDTTTGTDIWVSS
EEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCEEECCCCCCEEECCCCCCCCEEEEEC
DAGACLSCHQKYLSDSGANHIVANGGILDGMSAADVNTRSAEACSTCHNPAQLMELHGN
CCCHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCCCCCCHHHHHHCCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA