| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962515
Identifier: 157962515
GI number: 157962515
Start: 3284311
End: 3286233
Strand: Direct
Name: 157962515
Synonym: Spea_2694
Alternate gene names: NA
Gene position: 3284311-3286233 (Clockwise)
Preceding gene: 157962514
Following gene: 157962516
Centisome position: 63.47
GC content: 49.35
Gene sequence:
>1923_bases ATGAAACGAGTCACTCAATCACTAATAGCAAAAATAGCAAAAACGATTCCACTTGCGCTAATAGCTATGTTAGCAGGCTG TGGCGGAGACGATGCTCAACCCGGCAATCCTGGCGAACCTGGCGGCCCTCCTGCCAGCGAAATTAACAGCCTCAACATTT CGGTCAATGAAGTGCTATTCGACTCTGGTATTGCAACGGTGAATTATCGTATTACCAATGAAGCAGATGAACCCGTTGTT GGTATTCCATCTGCCACTTATCTTGCGGCGCAGCTTCTTCCTCAAGGTTATACTAATGCGGGTAATGCCAGTCAGTGGCA ATACTTTACCTCTGAGTCTTGCTCGAGCAGCTGTGATGGCGAGTTTATCGATCATAAAAACGGTAAGTACAGCTACACAT TTAGCGGTGCTTTCGATGGCATGAATGACGTTAGCTATATGCAAGGAGCCACTCAGCGTGTGGTGATAAAAGTTGGCGGA GATAGTCTTGCCGACGGTACCGCTCTGCCCGTCACCAATCAACATTTTGATTGGCAGGATAAAGGCAGTGAGCCAGCCTA CACCCGCAACCTCATCGAAATGAGCAGCTGTAACACCTGTCATAATGACTTGGCTTTTCATGGCAGCAAGTACAATGAAG TAGAGACCTGTGTCACCTGCCACAATGTAGATAAAGTCAGCAATCCAGGTAATGTGTTCGCCCCCATGGTTCACACCAAA CACCTTACAGGCTTTCCAGTATCGCTGGGCGATTGTCAAACTTGTCACGTCGCAGATGAAGCGCTTACCGAAAACATGAA CTGGGCGCGCGTGCCGACTATGGAAGCCTGTGGCAGCTGCCATACCAATATCGACTTTCCTGCGGGTCAAGGACATCCAA CTCAAGTGGATAACAGTAACTGCGTAGCTTGTCATAATTCAGATTGGACTAAGAGTGCTCACAGCCAAGCTGATAGCGAT GCGGTACTTGGTCAGTTTAACGCTGAAGTGGTCAGTGCTGAGCTCGTTGGCGATGCGGTAAATTTCGCTGTCAGACTGTC AAATCCTGCGACCAATGAGGTCTATGTAGACAGTGCCGACAAACTTAACTTCATCGACGATCTTCGTGTATATGCCAACT TCGGCATTAGTGTGGATTACACCACTCGTAGTGCCAAATCGATAAAGCTACAGGACACAACGCCGCTCTCAGGCAGTAAC GGTGTCTACCATTATCAAATTTCAGGGCTAACGCTAAGTGCAGATCCTGCAAATGATAAAGGCGCCCTCGCCCTTCAAGG TAAGCTTTGTAGCACTGAATCCATGCTAGCAGACTGTGCTGATACAGATTCCACAACGACGATAAAGTCCAGCCATCAAT ACTTTAGTGCCACAGCCATAACGGAGCTTGGTCGCAGAATTGTCGTCACCAATGAAACCTGTGGCAGTTGCCATGGCGAT CAACAGCTGAATTATCATGGTTCACGCAACGATCTTGAAGGTCAATGTCAGCTCTGCCACAACCCTAATATGGTTGCGGA TGCGACCGCAGCAAATCCTGCGGCATCAACCGCTGATTATAAGCATCTAGCCCATACCTTACATGCAGGCTCGAGAGAGA GTTACCCCGATATTAACTACCCAGGCAATATTGGTAACTGTGCACAGTGCCATACGACGGATGATGCCGACATATTAACG GCAGCATTACCCCTCGACGCAGCCGTGCAGCCTCTTGCCTTTGATGATGGCAGCTTCACCAGTCCCGCCTCGGCCATCTG CAGTGCATGTCACTTAGGTGACTCTGCAAACGCCCATATGACCCAACAAGGCGGCGTATTTAAGGGGACCGAGGCCGACG CCAGCGCAGGCACCGAAAGCTGCGCAACTTGTCATGGACAAGGCGCAGCGGTCGATGTGTTAAAGGTTCACCCAATAAAA TAA
Upstream 100 bases:
>100_bases CTATAGCCTTGAGCGAGTCACAGCAGCCTTGAGCTAGCAACGATAGCTTTGAGCTACGAGCAACAGCCAAGTCAATAAAA AGGAATTCAAGGACATCAAT
Downstream 100 bases:
>100_bases AAAGTTATAGCCCTAAACATCAAACTTTAGGGCTGCACATTTTGTGATGAGAAACGATTTGTGACGCAAATAATTAGTGC CAGAAACAAGTGGCAAAACT
Product: decaheme cytochrome c MtrF
Products: NA
Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; DeCa-Heme C-Type Cytochrome; Deca-Heme C-Type Cytochrome; Decaheme Cytochrome C-Like Protein
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MKRVTQSLIAKIAKTIPLALIAMLAGCGGDDAQPGNPGEPGGPPASEINSLNISVNEVLFDSGIATVNYRITNEADEPVV GIPSATYLAAQLLPQGYTNAGNASQWQYFTSESCSSSCDGEFIDHKNGKYSYTFSGAFDGMNDVSYMQGATQRVVIKVGG DSLADGTALPVTNQHFDWQDKGSEPAYTRNLIEMSSCNTCHNDLAFHGSKYNEVETCVTCHNVDKVSNPGNVFAPMVHTK HLTGFPVSLGDCQTCHVADEALTENMNWARVPTMEACGSCHTNIDFPAGQGHPTQVDNSNCVACHNSDWTKSAHSQADSD AVLGQFNAEVVSAELVGDAVNFAVRLSNPATNEVYVDSADKLNFIDDLRVYANFGISVDYTTRSAKSIKLQDTTPLSGSN GVYHYQISGLTLSADPANDKGALALQGKLCSTESMLADCADTDSTTTIKSSHQYFSATAITELGRRIVVTNETCGSCHGD QQLNYHGSRNDLEGQCQLCHNPNMVADATAANPAASTADYKHLAHTLHAGSRESYPDINYPGNIGNCAQCHTTDDADILT AALPLDAAVQPLAFDDGSFTSPASAICSACHLGDSANAHMTQQGGVFKGTEADASAGTESCATCHGQGAAVDVLKVHPIK
Sequences:
>Translated_640_residues MKRVTQSLIAKIAKTIPLALIAMLAGCGGDDAQPGNPGEPGGPPASEINSLNISVNEVLFDSGIATVNYRITNEADEPVV GIPSATYLAAQLLPQGYTNAGNASQWQYFTSESCSSSCDGEFIDHKNGKYSYTFSGAFDGMNDVSYMQGATQRVVIKVGG DSLADGTALPVTNQHFDWQDKGSEPAYTRNLIEMSSCNTCHNDLAFHGSKYNEVETCVTCHNVDKVSNPGNVFAPMVHTK HLTGFPVSLGDCQTCHVADEALTENMNWARVPTMEACGSCHTNIDFPAGQGHPTQVDNSNCVACHNSDWTKSAHSQADSD AVLGQFNAEVVSAELVGDAVNFAVRLSNPATNEVYVDSADKLNFIDDLRVYANFGISVDYTTRSAKSIKLQDTTPLSGSN GVYHYQISGLTLSADPANDKGALALQGKLCSTESMLADCADTDSTTTIKSSHQYFSATAITELGRRIVVTNETCGSCHGD QQLNYHGSRNDLEGQCQLCHNPNMVADATAANPAASTADYKHLAHTLHAGSRESYPDINYPGNIGNCAQCHTTDDADILT AALPLDAAVQPLAFDDGSFTSPASAICSACHLGDSANAHMTQQGGVFKGTEADASAGTESCATCHGQGAAVDVLKVHPIK >Mature_640_residues MKRVTQSLIAKIAKTIPLALIAMLAGCGGDDAQPGNPGEPGGPPASEINSLNISVNEVLFDSGIATVNYRITNEADEPVV GIPSATYLAAQLLPQGYTNAGNASQWQYFTSESCSSSCDGEFIDHKNGKYSYTFSGAFDGMNDVSYMQGATQRVVIKVGG DSLADGTALPVTNQHFDWQDKGSEPAYTRNLIEMSSCNTCHNDLAFHGSKYNEVETCVTCHNVDKVSNPGNVFAPMVHTK HLTGFPVSLGDCQTCHVADEALTENMNWARVPTMEACGSCHTNIDFPAGQGHPTQVDNSNCVACHNSDWTKSAHSQADSD AVLGQFNAEVVSAELVGDAVNFAVRLSNPATNEVYVDSADKLNFIDDLRVYANFGISVDYTTRSAKSIKLQDTTPLSGSN GVYHYQISGLTLSADPANDKGALALQGKLCSTESMLADCADTDSTTTIKSSHQYFSATAITELGRRIVVTNETCGSCHGD QQLNYHGSRNDLEGQCQLCHNPNMVADATAANPAASTADYKHLAHTLHAGSRESYPDINYPGNIGNCAQCHTTDDADILT AALPLDAAVQPLAFDDGSFTSPASAICSACHLGDSANAHMTQQGGVFKGTEADASAGTESCATCHGQGAAVDVLKVHPIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67598; Mature: 67598
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVTQSLIAKIAKTIPLALIAMLAGCGGDDAQPGNPGEPGGPPASEINSLNISVNEVLF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCEEEEEHHHEEE DSGIATVNYRITNEADEPVVGIPSATYLAAQLLPQGYTNAGNASQWQYFTSESCSSSCDG CCCEEEEEEEEECCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCC EFIDHKNGKYSYTFSGAFDGMNDVSYMQGATQRVVIKVGGDSLADGTALPVTNQHFDWQD CEEECCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC KGSEPAYTRNLIEMSSCNTCHNDLAFHGSKYNEVETCVTCHNVDKVSNPGNVFAPMVHTK CCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHEEECCCCCCCCCCCEEECEEEEC HLTGFPVSLGDCQTCHVADEALTENMNWARVPTMEACGSCHTNIDFPAGQGHPTQVDNSN CCCCCCCCCCCCCEEEHHHHHHHCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCC CVACHNSDWTKSAHSQADSDAVLGQFNAEVVSAELVGDAVNFAVRLSNPATNEVYVDSAD EEEECCCCCCCHHHCCCCCCHHHCCCCHHEEEHHHHCCEEEEEEEECCCCCCEEEECCCC KLNFIDDLRVYANFGISVDYTTRSAKSIKLQDTTPLSGSNGVYHYQISGLTLSADPANDK CCCHHHHHHEEEECCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECEEEECCCCCCC GALALQGKLCSTESMLADCADTDSTTTIKSSHQYFSATAITELGRRIVVTNETCGSCHGD CEEEEECCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCC QQLNYHGSRNDLEGQCQLCHNPNMVADATAANPAASTADYKHLAHTLHAGSRESYPDINY CCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PGNIGNCAQCHTTDDADILTAALPLDAAVQPLAFDDGSFTSPASAICSACHLGDSANAHM CCCCCCCEEECCCCCHHHEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEE TQQGGVFKGTEADASAGTESCATCHGQGAAVDVLKVHPIK ECCCCEEECCCCCCCCCCCHHHHCCCCCCEEEEEEEECCC >Mature Secondary Structure MKRVTQSLIAKIAKTIPLALIAMLAGCGGDDAQPGNPGEPGGPPASEINSLNISVNEVLF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCEEEEEHHHEEE DSGIATVNYRITNEADEPVVGIPSATYLAAQLLPQGYTNAGNASQWQYFTSESCSSSCDG CCCEEEEEEEEECCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCC EFIDHKNGKYSYTFSGAFDGMNDVSYMQGATQRVVIKVGGDSLADGTALPVTNQHFDWQD CEEECCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC KGSEPAYTRNLIEMSSCNTCHNDLAFHGSKYNEVETCVTCHNVDKVSNPGNVFAPMVHTK CCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHEEECCCCCCCCCCCEEECEEEEC HLTGFPVSLGDCQTCHVADEALTENMNWARVPTMEACGSCHTNIDFPAGQGHPTQVDNSN CCCCCCCCCCCCCEEEHHHHHHHCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCC CVACHNSDWTKSAHSQADSDAVLGQFNAEVVSAELVGDAVNFAVRLSNPATNEVYVDSAD EEEECCCCCCCHHHCCCCCCHHHCCCCHHEEEHHHHCCEEEEEEEECCCCCCEEEECCCC KLNFIDDLRVYANFGISVDYTTRSAKSIKLQDTTPLSGSNGVYHYQISGLTLSADPANDK CCCHHHHHHEEEECCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECEEEECCCCCCC GALALQGKLCSTESMLADCADTDSTTTIKSSHQYFSATAITELGRRIVVTNETCGSCHGD CEEEEECCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCC QQLNYHGSRNDLEGQCQLCHNPNMVADATAANPAASTADYKHLAHTLHAGSRESYPDINY CCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PGNIGNCAQCHTTDDADILTAALPLDAAVQPLAFDDGSFTSPASAICSACHLGDSANAHM CCCCCCCEEECCCCCHHHEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCEE TQQGGVFKGTEADASAGTESCATCHGQGAAVDVLKVHPIK ECCCCEEECCCCCCCCCCCHHHHCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA