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The map label for this gene is 157962468

Identifier: 157962468

GI number: 157962468

Start: 3223991

End: 3225238

Strand: Reverse

Name: 157962468

Synonym: Spea_2647

Alternate gene names: NA

Gene position: 3225238-3223991 (Counterclockwise)

Preceding gene: 157962469

Following gene: 157962466

Centisome position: 62.33

GC content: 41.35

Gene sequence:

>1248_bases
ATGACTAAAATCAATACAATTGCTGCAGCTCTAATACTTTGTTTAGGTGGAAGCGTTGCAGTCGCGCCTGTCGCATATGC
GGCAGAGAAATGCCCGATTGAAAAGCGTAAATCGAAAGCTGTTGGTCAGAGTGCTTCTAAAAAAGTGCAAAGATCTTTCG
AGGCTTACACTGAAGGCAATCTTGACGAAGCTATTTCGATTCTGTTAGAAGCTAATGCCAGGAGCGATTTCGACAAAGCT
TATATCGCCCGTATGTTAGGTAACTTTTATGCGGAAAAAGGACAGATGGGTACCGCGGTTAAGTACCTAAAGTCTGCGAT
TGATGCTGATATTCTTGGTGGTGTTGATCACGCTCAAACTCTACGGCTCTACGCTGACCTCCTGATTGGAGAGAAGAAGT
TTAAAGAGTCTATCCCGATGTATTACAAGTGGATGGAGTTTACCTGTAAAGAAGATGCACAAGTCTATAAGCGTATAGCT
ATTGCACATTCTGAGCAAAAAGAGTGGGATAAGGTCCTTAAAGTTGCAGATAAAGGCCTAGCCATTTCTGAAAAGCCTGA
TAAGACTTTATATCAGGTGAAACTAACAGCGTACTACAACCAGAAGAAATACAAAGACTCTGTTAAAGTTCTAGAAATAA
TGGTGCCATTATTTCCGGAAGATAAGCGTCTTTGGGTTCAGTTAGCTCAGTTCTATCTTTTGACCGGTGATAATAGTAAG
TCGCTTGCTACATACGACTTAGCTTATAAGAATGGTTTTTTAGAGACAGCGGGTAATATTACTCGATTGTCACAGCTTCT
TGCGGCAGATGGCTCGCCGTACTACGCTGCTAAAATTATGACTAAGCATATGAAATCGGGCTTGATCAAAGAAGACGAGA
AAACCCTGACTTCACTCGCTGGTTTTTACCAAAATGCTAAGGAGATGAAACAAGCTGCTCAGACATATGGTAAAGCTGCT
GCGATAAACAACAGTGGTAAATTGTACCTCAGACAAGGCCGTATTTTAGCGTTGGATGGACAGCATAAGTCTGCTGTTAC
CGTGCTGAAAAAGTCTCTTGATGCAGGTATAAAAAACCCTGGCGAAGCTCAGTTTGAACTGGCATTAGCTTATCTTAATC
TTAAGCAGTACAAGTCAGCATATAAGTATGCCAAACTTGCTGCTAATGATAAGAAAACAGCGCGTTCAGCTAAGAGTTAT
ATCTCTTACATTAAAGAAAAGGCTCGCGTACATAACGTAGCCCTATAA

Upstream 100 bases:

>100_bases
AGTGGAAGTACAAGCCTAAGATTGTTGACGGTAAAGCCCTTAAACAACCTGGCATGACAGTTCAGCTTGATTTCACTCTA
GACAAAGGAGGCAGATAATT

Downstream 100 bases:

>100_bases
TTTTGTAAGTTGAAAAAAGCCCCTTTTTAGGGGCTTTTTTATGCTTTGAATTTGAGCTAACGATACTTTGTCGTTACAGG
GGACAGAGATGAATAAGTCT

Product: tetratricopeptide domain-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; TPR Domain Protein; TPR Domain Protein Component Of nB System; Tetratricopeptide Domain Protein; PAS/PAC Sensor Protein; TPR Repeat Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Region; Short Chain Dehydrogenase

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTKINTIAAALILCLGGSVAVAPVAYAAEKCPIEKRKSKAVGQSASKKVQRSFEAYTEGNLDEAISILLEANARSDFDKA
YIARMLGNFYAEKGQMGTAVKYLKSAIDADILGGVDHAQTLRLYADLLIGEKKFKESIPMYYKWMEFTCKEDAQVYKRIA
IAHSEQKEWDKVLKVADKGLAISEKPDKTLYQVKLTAYYNQKKYKDSVKVLEIMVPLFPEDKRLWVQLAQFYLLTGDNSK
SLATYDLAYKNGFLETAGNITRLSQLLAADGSPYYAAKIMTKHMKSGLIKEDEKTLTSLAGFYQNAKEMKQAAQTYGKAA
AINNSGKLYLRQGRILALDGQHKSAVTVLKKSLDAGIKNPGEAQFELALAYLNLKQYKSAYKYAKLAANDKKTARSAKSY
ISYIKEKARVHNVAL

Sequences:

>Translated_415_residues
MTKINTIAAALILCLGGSVAVAPVAYAAEKCPIEKRKSKAVGQSASKKVQRSFEAYTEGNLDEAISILLEANARSDFDKA
YIARMLGNFYAEKGQMGTAVKYLKSAIDADILGGVDHAQTLRLYADLLIGEKKFKESIPMYYKWMEFTCKEDAQVYKRIA
IAHSEQKEWDKVLKVADKGLAISEKPDKTLYQVKLTAYYNQKKYKDSVKVLEIMVPLFPEDKRLWVQLAQFYLLTGDNSK
SLATYDLAYKNGFLETAGNITRLSQLLAADGSPYYAAKIMTKHMKSGLIKEDEKTLTSLAGFYQNAKEMKQAAQTYGKAA
AINNSGKLYLRQGRILALDGQHKSAVTVLKKSLDAGIKNPGEAQFELALAYLNLKQYKSAYKYAKLAANDKKTARSAKSY
ISYIKEKARVHNVAL
>Mature_414_residues
TKINTIAAALILCLGGSVAVAPVAYAAEKCPIEKRKSKAVGQSASKKVQRSFEAYTEGNLDEAISILLEANARSDFDKAY
IARMLGNFYAEKGQMGTAVKYLKSAIDADILGGVDHAQTLRLYADLLIGEKKFKESIPMYYKWMEFTCKEDAQVYKRIAI
AHSEQKEWDKVLKVADKGLAISEKPDKTLYQVKLTAYYNQKKYKDSVKVLEIMVPLFPEDKRLWVQLAQFYLLTGDNSKS
LATYDLAYKNGFLETAGNITRLSQLLAADGSPYYAAKIMTKHMKSGLIKEDEKTLTSLAGFYQNAKEMKQAAQTYGKAAA
INNSGKLYLRQGRILALDGQHKSAVTVLKKSLDAGIKNPGEAQFELALAYLNLKQYKSAYKYAKLAANDKKTARSAKSYI
SYIKEKARVHNVAL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46190; Mature: 46059

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50293 TPR_REGION ; PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKINTIAAALILCLGGSVAVAPVAYAAEKCPIEKRKSKAVGQSASKKVQRSFEAYTEGN
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCC
LDEAISILLEANARSDFDKAYIARMLGNFYAEKGQMGTAVKYLKSAIDADILGGVDHAQT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH
LRLYADLLIGEKKFKESIPMYYKWMEFTCKEDAQVYKRIAIAHSEQKEWDKVLKVADKGL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
AISEKPDKTLYQVKLTAYYNQKKYKDSVKVLEIMVPLFPEDKRLWVQLAQFYLLTGDNSK
CCCCCCCCEEEEEEEEHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCC
SLATYDLAYKNGFLETAGNITRLSQLLAADGSPYYAAKIMTKHMKSGLIKEDEKTLTSLA
CEEEEEHHHHCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
GFYQNAKEMKQAAQTYGKAAAINNSGKLYLRQGRILALDGQHKSAVTVLKKSLDAGIKNP
HHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCC
GEAQFELALAYLNLKQYKSAYKYAKLAANDKKTARSAKSYISYIKEKARVHNVAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKINTIAAALILCLGGSVAVAPVAYAAEKCPIEKRKSKAVGQSASKKVQRSFEAYTEGN
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCC
LDEAISILLEANARSDFDKAYIARMLGNFYAEKGQMGTAVKYLKSAIDADILGGVDHAQT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH
LRLYADLLIGEKKFKESIPMYYKWMEFTCKEDAQVYKRIAIAHSEQKEWDKVLKVADKGL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
AISEKPDKTLYQVKLTAYYNQKKYKDSVKVLEIMVPLFPEDKRLWVQLAQFYLLTGDNSK
CCCCCCCCEEEEEEEEHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCC
SLATYDLAYKNGFLETAGNITRLSQLLAADGSPYYAAKIMTKHMKSGLIKEDEKTLTSLA
CEEEEEHHHHCCCHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
GFYQNAKEMKQAAQTYGKAAAINNSGKLYLRQGRILALDGQHKSAVTVLKKSLDAGIKNP
HHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCC
GEAQFELALAYLNLKQYKSAYKYAKLAANDKKTARSAKSYISYIKEKARVHNVAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA