Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962466
Identifier: 157962466
GI number: 157962466
Start: 3221500
End: 3223332
Strand: Reverse
Name: 157962466
Synonym: Spea_2645
Alternate gene names: NA
Gene position: 3223332-3221500 (Counterclockwise)
Preceding gene: 157962468
Following gene: 157962465
Centisome position: 62.29
GC content: 44.24
Gene sequence:
>1833_bases ATGAGGAAGGCGGTTCTTGCGTTGTCAATTGGCGCAATTTTAGGGTTAGCTGGCTGTGGTGAAAATGATGCAAAGCAAAC ACAGGCACAAGAGCAAACGAGCCAAATAGCAGCTAACGAGGCTGGTCAAGAGCAGTCAGCAGAGCAGGCTTACCTGTTAT TAGTGGACAACTACTTTAACGATTTATTGAAGCTAGAACCTATCTACGCCACTTTTGTTGGTGTTAATGACTATAACGAC CAATTTGGTGATGGCTTATCACATGCTTATTTAACTGAGCGTCATCAACTTAATACTCGATACTTAAAAGAGGTCAAAAA AATTGATCGTGACCAGTTGTCAAATGAGTTAAAGCTTAGCTACGACATGTTTAATTATGATCGCAATGTTGCCTTGGCTG ATGAGACATTCCCTAATCACTTTATGCCGATGAACCAGTTTTATAGCACTGTTATCAGCATGGTACAGCTTGGCAGCGGT GAAAGTGCTCAGCCGTTTAACACCGTGGAAGACTACCGTAACTGGGAAAAGCGTTTGCTGGGATTTATTGACTGGCTTAA GCTCGCCCAAGTTCGAATGAATGAAGGCATCGAGAGCAAAGTCGTGTTACCGCGTGTGCTTGTTGAACGCATTATTCCTC AGCTGAGTGCGCAGTTAGTCGATAACGTAGACGATAGCTTATTCTATACCCCGATCACCCTAATGCCTGAGTCTTTTTCA GATACTGACAAGCAGGCCATCACTGCAGAATACACTAAGCTAATTGGTGAGCAGTTGATACCTGAGCTGACTTCATTACG TAATTACTTCCAGAATACTTATATCAAGTCGTCTCGTGCGACTGACGGTTGGTGGGGCCTTCCAAACGGTAAAGTTTGGT ATCAACATCTGGCTAACTCACATACGACAACGACTATGCCAGTAGATGAAATCCATAAGGTCGGTTTAGATGAAGTTGCT CGAATTTTATCCGAAATGGATAAGGTGCGTGTACAAGTTGACTTTGAAGGAGACTTGAACGCATTTTTTGCATCATTATC TTCTGAGCCGCAGTACTTCTTTACAGAGCGTCAAGGCTTAATTGATGGCTATATGGAGCTCAAAGAGCAAATCAATGTTC AGATGCCTAAGTACTTCAACGTCATGCCTAAAGCTGATTATGTGGTTAAGCCAGTAGAGAGCTTTAGAGAGCAATCGGCG GCAGGCGCATCTTATGATGCACCTGCAGTAGATGGTTCACGTCCTGGTGTATTCTATATTAATACCTATAACCTGAAAGC GCAGCCTAAATGGGGCATGACCACTTTATCCCTGCATGAAGCCGCTCCTGGTCATCACTTCCAAATTGCGATTAAACAAG AGTTAACCGGTGTCCCAGAGTTTCAACGCTTTGGCGGCTACACGGCATTTGAAGAGGGTTGGGGACTCTATGCTGAGTAC TTAGGTATTGAGATGGGGCTGTTTAACGATCCCTATCAATACTTTGGTAAGCTTTCTGATGAGATGCTACGTGCAATGCG CTTAGTGGTGGATACTGGTCTGCATGCTAAAGGTTGGACGCGTGAGCAAGCGATTCAGTATATGAAAGATAACTCGCCAA TGGCGGAGTCAGACATCATCGCAGAAGTTGAGCGTTATATGGCTATTCCTGGTCAAGCATTAAGCTATAAAGTTGGCCAA TTACAGATCTTAGCGCTGCGAGCAAAGTCGGAGCAGGAGCTTGGCGATAAGTTTGACTTAAAAGCCTTTCACGATCAGAT CCTAACTTCGGGTTCGCTGCCGATGGAAGTGATGGAGCTAAAAGTGAACGATTGGATTGCTTCACAAAAGTAA
Upstream 100 bases:
>100_bases TAAAGCCAGAGTTGCTGAATGAATAGATCATTAAAGGCTCCTTATTTGGTTTAAGTATAGAAAAAATAGAAGACTAACAA TAAAGAAAAGGAATAATAAA
Downstream 100 bases:
>100_bases GATAACCAATCTGTAATAACCCAGCTGGGATGTACCGTATTTGCAAGTCGTTTGACTATAAATAATGGTATATACTGGCT GGGTTTTATTTTGCCTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MRKAVLALSIGAILGLAGCGENDAKQTQAQEQTSQIAANEAGQEQSAEQAYLLLVDNYFNDLLKLEPIYATFVGVNDYND QFGDGLSHAYLTERHQLNTRYLKEVKKIDRDQLSNELKLSYDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSG ESAQPFNTVEDYRNWEKRLLGFIDWLKLAQVRMNEGIESKVVLPRVLVERIIPQLSAQLVDNVDDSLFYTPITLMPESFS DTDKQAITAEYTKLIGEQLIPELTSLRNYFQNTYIKSSRATDGWWGLPNGKVWYQHLANSHTTTTMPVDEIHKVGLDEVA RILSEMDKVRVQVDFEGDLNAFFASLSSEPQYFFTERQGLIDGYMELKEQINVQMPKYFNVMPKADYVVKPVESFREQSA AGASYDAPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFGGYTAFEEGWGLYAEY LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ LQILALRAKSEQELGDKFDLKAFHDQILTSGSLPMEVMELKVNDWIASQK
Sequences:
>Translated_610_residues MRKAVLALSIGAILGLAGCGENDAKQTQAQEQTSQIAANEAGQEQSAEQAYLLLVDNYFNDLLKLEPIYATFVGVNDYND QFGDGLSHAYLTERHQLNTRYLKEVKKIDRDQLSNELKLSYDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSG ESAQPFNTVEDYRNWEKRLLGFIDWLKLAQVRMNEGIESKVVLPRVLVERIIPQLSAQLVDNVDDSLFYTPITLMPESFS DTDKQAITAEYTKLIGEQLIPELTSLRNYFQNTYIKSSRATDGWWGLPNGKVWYQHLANSHTTTTMPVDEIHKVGLDEVA RILSEMDKVRVQVDFEGDLNAFFASLSSEPQYFFTERQGLIDGYMELKEQINVQMPKYFNVMPKADYVVKPVESFREQSA AGASYDAPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFGGYTAFEEGWGLYAEY LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ LQILALRAKSEQELGDKFDLKAFHDQILTSGSLPMEVMELKVNDWIASQK >Mature_610_residues MRKAVLALSIGAILGLAGCGENDAKQTQAQEQTSQIAANEAGQEQSAEQAYLLLVDNYFNDLLKLEPIYATFVGVNDYND QFGDGLSHAYLTERHQLNTRYLKEVKKIDRDQLSNELKLSYDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSG ESAQPFNTVEDYRNWEKRLLGFIDWLKLAQVRMNEGIESKVVLPRVLVERIIPQLSAQLVDNVDDSLFYTPITLMPESFS DTDKQAITAEYTKLIGEQLIPELTSLRNYFQNTYIKSSRATDGWWGLPNGKVWYQHLANSHTTTTMPVDEIHKVGLDEVA RILSEMDKVRVQVDFEGDLNAFFASLSSEPQYFFTERQGLIDGYMELKEQINVQMPKYFNVMPKADYVVKPVESFREQSA AGASYDAPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFGGYTAFEEGWGLYAEY LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQ LQILALRAKSEQELGDKFDLKAFHDQILTSGSLPMEVMELKVNDWIASQK
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69289; Mature: 69289
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAVLALSIGAILGLAGCGENDAKQTQAQEQTSQIAANEAGQEQSAEQAYLLLVDNYFN CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHH DLLKLEPIYATFVGVNDYNDQFGDGLSHAYLTERHQLNTRYLKEVKKIDRDQLSNELKLS HHHHCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEE YDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSGESAQPFNTVEDYRNWEKRLL EHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH GFIDWLKLAQVRMNEGIESKVVLPRVLVERIIPQLSAQLVDNVDDSLFYTPITLMPESFS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEECCCCCC DTDKQAITAEYTKLIGEQLIPELTSLRNYFQNTYIKSSRATDGWWGLPNGKVWYQHLANS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC HTTTTMPVDEIHKVGLDEVARILSEMDKVRVQVDFEGDLNAFFASLSSEPQYFFTERQGL CCCCCCCHHHHHHCCHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCCEEEHHHHHH IDGYMELKEQINVQMPKYFNVMPKADYVVKPVESFREQSAAGASYDAPAVDGSRPGVFYI HHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE NTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFGGYTAFEEGWGLYAEY EEEEEEECCCCCCEEEEECCCCCCCEEEEEEHHHCCCCCCHHHHCCCCCHHHCCHHHHHH LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDII HHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHH AEVERYMAIPGQALSYKVGQLQILALRAKSEQELGDKFDLKAFHDQILTSGSLPMEVMEL HHHHHHHCCCCCHHEEECCCEEEEEEECCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH KVNDWIASQK HHHHHHCCCC >Mature Secondary Structure MRKAVLALSIGAILGLAGCGENDAKQTQAQEQTSQIAANEAGQEQSAEQAYLLLVDNYFN CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHH DLLKLEPIYATFVGVNDYNDQFGDGLSHAYLTERHQLNTRYLKEVKKIDRDQLSNELKLS HHHHCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHEEE YDMFNYDRNVALADETFPNHFMPMNQFYSTVISMVQLGSGESAQPFNTVEDYRNWEKRLL EHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH GFIDWLKLAQVRMNEGIESKVVLPRVLVERIIPQLSAQLVDNVDDSLFYTPITLMPESFS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEECCCCCC DTDKQAITAEYTKLIGEQLIPELTSLRNYFQNTYIKSSRATDGWWGLPNGKVWYQHLANS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC HTTTTMPVDEIHKVGLDEVARILSEMDKVRVQVDFEGDLNAFFASLSSEPQYFFTERQGL CCCCCCCHHHHHHCCHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCCEEEHHHHHH IDGYMELKEQINVQMPKYFNVMPKADYVVKPVESFREQSAAGASYDAPAVDGSRPGVFYI HHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE NTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFGGYTAFEEGWGLYAEY EEEEEEECCCCCCEEEEECCCCCCCEEEEEEHHHCCCCCCHHHHCCCCCHHHCCHHHHHH LGIEMGLFNDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWTREQAIQYMKDNSPMAESDII HHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHH AEVERYMAIPGQALSYKVGQLQILALRAKSEQELGDKFDLKAFHDQILTSGSLPMEVMEL HHHHHHHCCCCCHHEEECCCEEEEEEECCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH KVNDWIASQK HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA