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The map label for this gene is tonB [H]

Identifier: 157962469

GI number: 157962469

Start: 3225241

End: 3225861

Strand: Reverse

Name: tonB [H]

Synonym: Spea_2648

Alternate gene names: 157962469

Gene position: 3225861-3225241 (Counterclockwise)

Preceding gene: 157962470

Following gene: 157962468

Centisome position: 62.34

GC content: 45.09

Gene sequence:

>621_bases
ATGCTGAGAGGAATAGTATCACTGATAATTGGTGCTGCTGTGACTTTTGCCTTATTTGTCTTCATGGCATTCTTGGTAGG
TGGCGGTCCAACCCGCCACGATTCCTCGACAGAAACACCTGTCATTGAAATATCCATGAACAAAGATGATGCAACAGCGC
AGAAAAAGCCAAGGGTTAAGCCTAAACCGCCTACACCCCCAGAGCAGCCTCCAAAGCCGGATACTACGCCACCAGATAGT
TCATCTGACATTGATACAAATATGTCATTTAACATGGGTGGAGTTGATGCCGGTGGTGCTAACACTGGATTTAAACTAGG
TAACATGATGACACGAGACGGTGACGCAACACCTATCGTTCGAATTGAACCTCAGTATCCAATTAAAGCGGCACGCGATG
GTAAAGAAGGTTGGGTGCAACTTAGCTTTACGATTAACGAGTTAGGTGGTGTTGAAGACGTTAAAGTCATCAAGGCTGAA
CCTAAGCGTCTATTTGATAAAGAAGCTCGACGCGCACTGAAAAAGTGGAAGTACAAGCCTAAGATTGTTGACGGTAAAGC
CCTTAAACAACCTGGCATGACAGTTCAGCTTGATTTCACTCTAGACAAAGGAGGCAGATAA

Upstream 100 bases:

>100_bases
GCAGACCAAGAAGCTAGACACGGTTTAGTGGTTAAGGTACTTGATAACGTTAAAGCTGCGGGTATCGATAAGATATCTGT
ATCGGCGGGGAACGAATAAT

Downstream 100 bases:

>100_bases
TTATGACTAAAATCAATACAATTGCTGCAGCTCTAATACTTTGTTTAGGTGGAAGCGTTGCAGTCGCGCCTGTCGCATAT
GCGGCAGAGAAATGCCCGAT

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLRGIVSLIIGAAVTFALFVFMAFLVGGGPTRHDSSTETPVIEISMNKDDATAQKKPRVKPKPPTPPEQPPKPDTTPPDS
SSDIDTNMSFNMGGVDAGGANTGFKLGNMMTRDGDATPIVRIEPQYPIKAARDGKEGWVQLSFTINELGGVEDVKVIKAE
PKRLFDKEARRALKKWKYKPKIVDGKALKQPGMTVQLDFTLDKGGR

Sequences:

>Translated_206_residues
MLRGIVSLIIGAAVTFALFVFMAFLVGGGPTRHDSSTETPVIEISMNKDDATAQKKPRVKPKPPTPPEQPPKPDTTPPDS
SSDIDTNMSFNMGGVDAGGANTGFKLGNMMTRDGDATPIVRIEPQYPIKAARDGKEGWVQLSFTINELGGVEDVKVIKAE
PKRLFDKEARRALKKWKYKPKIVDGKALKQPGMTVQLDFTLDKGGR
>Mature_206_residues
MLRGIVSLIIGAAVTFALFVFMAFLVGGGPTRHDSSTETPVIEISMNKDDATAQKKPRVKPKPPTPPEQPPKPDTTPPDS
SSDIDTNMSFNMGGVDAGGANTGFKLGNMMTRDGDATPIVRIEPQYPIKAARDGKEGWVQLSFTINELGGVEDVKVIKAE
PKRLFDKEARRALKKWKYKPKIVDGKALKQPGMTVQLDFTLDKGGR

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 22395; Mature: 22395

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGIVSLIIGAAVTFALFVFMAFLVGGGPTRHDSSTETPVIEISMNKDDATAQKKPRVK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PKPPTPPEQPPKPDTTPPDSSSDIDTNMSFNMGGVDAGGANTGFKLGNMMTRDGDATPIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEECCCEEECCCCCCCEE
RIEPQYPIKAARDGKEGWVQLSFTINELGGVEDVKVIKAEPKRLFDKEARRALKKWKYKP
EECCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC
KIVDGKALKQPGMTVQLDFTLDKGGR
CEECCHHHCCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MLRGIVSLIIGAAVTFALFVFMAFLVGGGPTRHDSSTETPVIEISMNKDDATAQKKPRVK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PKPPTPPEQPPKPDTTPPDSSSDIDTNMSFNMGGVDAGGANTGFKLGNMMTRDGDATPIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEECCCEEECCCCCCCEE
RIEPQYPIKAARDGKEGWVQLSFTINELGGVEDVKVIKAEPKRLFDKEARRALKKWKYKP
EECCCCCCCCCCCCCCCEEEEEEEEHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC
KIVDGKALKQPGMTVQLDFTLDKGGR
CEECCHHHCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8704984; 10984043 [H]