Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962462

Identifier: 157962462

GI number: 157962462

Start: 3219813

End: 3220199

Strand: Reverse

Name: 157962462

Synonym: Spea_2641

Alternate gene names: NA

Gene position: 3220199-3219813 (Counterclockwise)

Preceding gene: 157962463

Following gene: 157962461

Centisome position: 62.23

GC content: 44.7

Gene sequence:

>387_bases
ATGCAGTTTCCAGATGATGACAATGGCAAAATGCTTGAAGCGATGGCTGATGCCGGTATCGACTTATCAGCAGCTCTCGA
TGTTGATTTCTTCTTAGTTTTTGAAGATCAGCGCGATGCAGAGTCTGCACTTGAAGAGCTAGGTAAGTCAGATCTTGAAG
GAGAAATCGAACTTCTTCTAAATGATGAGTCTGGTAAGTGGGAACTAATCGTTTGTTTAAATATGGTGCCGGAATACGAC
ACTATTGTTGAACAAGAGATTAGTTTGCATGAGTTTGCCCAAGAGTTCGGTGGTGTTACCGACGGTTGGGGTGTGATGCA
GCATCAAGAAGGCGATGATGATTTCGCTGACGACGCACATGAGTGTGGCGACGACTGTAAGCACTAA

Upstream 100 bases:

>100_bases
GAAACACGCAAGCGCAAGAAAGTGATTGCTGGTGAAGTGGTTAGTTTTAACGGCGAAAGCGTTAAAATTATTGCTGAGTA
ACTAAGAAGAGAGGATAGAC

Downstream 100 bases:

>100_bases
AATAAGCTAAAAATCTTTTCAAAATAAGCCACTTATATTAGTGGCTTTTTTGTGCCCAAAAGTTAAGAATACGGATAGTC
CTTATATGTATCAATTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLLNDESGKWELIVCLNMVPEYD
TIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAHECGDDCKH

Sequences:

>Translated_128_residues
MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLLNDESGKWELIVCLNMVPEYD
TIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAHECGDDCKH
>Mature_128_residues
MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLLNDESGKWELIVCLNMVPEYD
TIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAHECGDDCKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14276; Mature: 14276

Theoretical pI: Translated: 3.53; Mature: 3.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLL
CCCCCCCCCHHHHHHHHCCCCEEEECCEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEE
NDESGKWELIVCLNMVPEYDTIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAH
ECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
ECGDDCKH
HHHHCCCC
>Mature Secondary Structure
MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLL
CCCCCCCCCHHHHHHHHCCCCEEEECCEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEE
NDESGKWELIVCLNMVPEYDTIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAH
ECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
ECGDDCKH
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA