Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962462
Identifier: 157962462
GI number: 157962462
Start: 3219813
End: 3220199
Strand: Reverse
Name: 157962462
Synonym: Spea_2641
Alternate gene names: NA
Gene position: 3220199-3219813 (Counterclockwise)
Preceding gene: 157962463
Following gene: 157962461
Centisome position: 62.23
GC content: 44.7
Gene sequence:
>387_bases ATGCAGTTTCCAGATGATGACAATGGCAAAATGCTTGAAGCGATGGCTGATGCCGGTATCGACTTATCAGCAGCTCTCGA TGTTGATTTCTTCTTAGTTTTTGAAGATCAGCGCGATGCAGAGTCTGCACTTGAAGAGCTAGGTAAGTCAGATCTTGAAG GAGAAATCGAACTTCTTCTAAATGATGAGTCTGGTAAGTGGGAACTAATCGTTTGTTTAAATATGGTGCCGGAATACGAC ACTATTGTTGAACAAGAGATTAGTTTGCATGAGTTTGCCCAAGAGTTCGGTGGTGTTACCGACGGTTGGGGTGTGATGCA GCATCAAGAAGGCGATGATGATTTCGCTGACGACGCACATGAGTGTGGCGACGACTGTAAGCACTAA
Upstream 100 bases:
>100_bases GAAACACGCAAGCGCAAGAAAGTGATTGCTGGTGAAGTGGTTAGTTTTAACGGCGAAAGCGTTAAAATTATTGCTGAGTA ACTAAGAAGAGAGGATAGAC
Downstream 100 bases:
>100_bases AATAAGCTAAAAATCTTTTCAAAATAAGCCACTTATATTAGTGGCTTTTTTGTGCCCAAAAGTTAAGAATACGGATAGTC CTTATATGTATCAATTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLLNDESGKWELIVCLNMVPEYD TIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAHECGDDCKH
Sequences:
>Translated_128_residues MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLLNDESGKWELIVCLNMVPEYD TIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAHECGDDCKH >Mature_128_residues MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLLNDESGKWELIVCLNMVPEYD TIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAHECGDDCKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14276; Mature: 14276
Theoretical pI: Translated: 3.53; Mature: 3.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLL CCCCCCCCCHHHHHHHHCCCCEEEECCEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEE NDESGKWELIVCLNMVPEYDTIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAH ECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH ECGDDCKH HHHHCCCC >Mature Secondary Structure MQFPDDDNGKMLEAMADAGIDLSAALDVDFFLVFEDQRDAESALEELGKSDLEGEIELLL CCCCCCCCCHHHHHHHHCCCCEEEECCEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEE NDESGKWELIVCLNMVPEYDTIVEQEISLHEFAQEFGGVTDGWGVMQHQEGDDDFADDAH ECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH ECGDDCKH HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA